MGE detailed information
MGE type: Genomic_island MGE length: 52667 bp
Accession: NZ_CP042973 Location: 3801861..3854527 Organism: Escherichia coli strain CFSAN061768 Replicon: chromosome
Accession: NZ_CP042973 Location: 3801861..3854527 Organism: Escherichia coli strain CFSAN061768 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CA694_RS18200 (3797577) | 3797577..3798245 | + | 669 | WP_001550676.1 | protein YkgH | - |
| CA694_RS18205 (3798488) | 3798488..3799183 | - | 696 | WP_001550675.1 | lactate utilization protein C | - |
| CA694_RS18210 (3799176) | 3799176..3800603 | - | 1428 | WP_001550674.1 | LutB/LldF family L-lactate oxidation iron-sulfur protein | - |
| CA694_RS18215 (3800614) | 3800614..3801333 | - | 720 | WP_001102122.1 | (Fe-S)-binding protein | - |
| CA694_RS18220 (3801861) | 3801861..3802715 | - | 855 | WP_000339603.1 | reactive chlorine-specific transcriptional regulator RclR | - |
| CA694_RS18225 (3802942) | 3802942..3804267 | + | 1326 | WP_072617209.1 | reactive chlorine resistance oxidoreductase RclA | - |
| CA694_RS18230 (3804376) | 3804376..3804612 | + | 237 | WP_000474077.1 | reactive chlorine resistance periplasmic protein RclB | - |
| CA694_RS18235 (3804624) | 3804624..3805217 | + | 594 | WP_001306921.1 | reactive chlorine species resistance protein RclC | - |
| CA694_RS18240 (3805377) | 3805377..3806246 | - | 870 | WP_001309281.1 | aldo/keto reductase | - |
| CA694_RS18245 (3806494) | 3806494..3807351 | + | 858 | WP_001309280.1 | Right origin-binding protein | VF |
| CA694_RS18250 (3807476) | 3807476..3811726 | - | 4251 | WP_001550673.1 | Invasin | VF |
| CA694_RS18255 (3812291) | 3812291..3813142 | + | 852 | WP_001550672.1 | aldo/keto reductase | - |
| CA694_RS18260 (3813169) | 3813169..3814158 | + | 990 | WP_001172288.1 | aldo/keto reductase | - |
| CA694_RS18265 (3814189) | 3814189..3815082 | - | 894 | WP_001550671.1 | HTH-type transcriptional regulator PgrR | VF |
| CA694_RS18270 (3815282) | 3815282..3816208 | - | 927 | WP_001328123.1 | HTH-type transcriptional regulator PgrR | VF |
| CA694_RS18275 (3816365) | 3816365..3817285 | + | 921 | WP_000860030.1 | alpha/beta hydrolase | - |
| CA694_RS18280 (3817459) | 3817459..3818601 | + | 1143 | WP_001595351.1 | NADH-dependent flavin oxidoreductase | - |
| CA694_RS18285 (3819073) | 3819073..3819174 | + | 102 | WP_000662258.1 | small membrane protein YkgR | - |
| CA694_RS18290 (3819533) | 3819533..3819796 | + | 264 | WP_000803998.1 | type B 50S ribosomal protein L31 | - |
| CA694_RS18295 (3819796) | 3819796..3819936 | + | 141 | WP_000866436.1 | type B 50S ribosomal protein L36 | - |
| CA694_RS18300 (3820006) | 3820006..3820196 | - | 191 | Protein_3598 | hypothetical protein | - |
| CA694_RS18305 (3821020) | 3821020..3821562 | + | 543 | WP_001305433.1 | HTH-type transcriptional regulator EcpR | VF |
| CA694_RS18310 (3821637) | 3821637..3822224 | + | 588 | WP_000730972.1 | Common pilus major fimbrillin subunit EcpA | VF |
| CA694_RS18315 (3822281) | 3822281..3822949 | + | 669 | WP_001521922.1 | putative fimbrial chaperone EcpB | VF |
| CA694_RS18320 (3822975) | 3822975..3825500 | + | 2526 | WP_001131068.1 | putative outer membrane usher protein EcpC | VF |
| CA694_RS18325 (3825490) | 3825490..3827133 | + | 1644 | WP_001521920.1 | Fimbria adhesin EcpD | VF |
| CA694_RS18330 (3827102) | 3827102..3827812 | + | 711 | WP_001586708.1 | putative fimbrial chaperone EcpE | VF |
| CA694_RS18335 (3828125) | 3828125..3828454 | + | 330 | WP_001303809.1 | YkgJ family cysteine cluster protein | - |
| CA694_RS18340 (3828703) | 3828703..3829317 | - | 615 | WP_001019920.1 | YagU family protein | - |
| CA694_RS18345 (3829723) | 3829723..3830412 | + | 690 | WP_000070677.1 | aldehyde dehydrogenase iron-sulfur subunit PaoA | - |
| CA694_RS18350 (3830409) | 3830409..3833156 | + | 2748 | WP_072617206.1 | aldehyde oxidoreductase molybdenum-binding subunit PaoC | - |
| CA694_RS18355 (3833166) | 3833166..3834119 | + | 954 | WP_001550665.1 | molybdenum cofactor insertion chaperone PaoD | - |
| CA694_RS18360 (3834298) | 3834298..3835425 | - | 1128 | WP_001550663.1 | MFS transporter | - |
| CA694_RS18365 (3835567) | 3835567..3836625 | - | 1059 | WP_122987197.1 | alpha/beta hydrolase | - |
| CA694_RS18370 (3836890) | 3836890..3837774 | + | 885 | WP_001119037.1 | HTH-type transcriptional regulator PgrR | VF |
| CA694_RS18375 (3838208) | 3838208..3839128 | - | 921 | WP_000365809.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| CA694_RS18380 (3839115) | 3839115..3839897 | - | 783 | WP_001550661.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | Antitoxin Detail |
| CA694_RS18385 (3840213) | 3840213..3843422 | + | 3210 | WP_001521910.1 | RNA-directed DNA polymerase | - |
| CA694_RS18390 (3843769) | 3843769..3844239 | + | 471 | WP_000201185.1 | hypothetical protein | - |
| CA694_RS18395 (3844236) | 3844236..3844338 | + | 103 | Protein_3617 | helix-turn-helix domain-containing protein | - |
| CA694_RS18400 (3844430) | 3844430..3844588 | + | 159 | Protein_3618 | integrase | - |
| CA694_RS18410 (3844793) | 3844793..3846046 | - | 1254 | WP_001550659.1 | glutamate-5-semialdehyde dehydrogenase | - |
| CA694_RS18415 (3846058) | 3846058..3847161 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| CA694_RS18420 (3847449) | 3847449..3848504 | + | 1056 | WP_000749881.1 | phosphoporin PhoE | - |
| CA694_RS18425 (3848543) | 3848543..3848944 | - | 402 | WP_000174684.1 | sigma factor-binding protein Crl | - |
| - (3849662) | 3849662..3849742 | - | 81 | NuclAT_11 | - | - |
| - (3849662) | 3849662..3849742 | - | 81 | NuclAT_11 | - | - |
| - (3849662) | 3849662..3849742 | - | 81 | NuclAT_11 | - | - |
| - (3849662) | 3849662..3849742 | - | 81 | NuclAT_11 | - | - |
| CA694_RS18430 (3849002) | 3849002..3850246 | - | 1245 | WP_000189541.1 | esterase FrsA | - |
| CA694_RS18435 (3850338) | 3850338..3850796 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| CA694_RS18440 (3851057) | 3851057..3852514 | + | 1458 | WP_001293009.1 | cytosol nonspecific dipeptidase | - |
| CA694_RS18445 (3852571) | 3852571..3852923 | - | 353 | Protein_3626 | peptide chain release factor H | - |
| CA694_RS18450 (3852919) | 3852919..3853125 | - | 207 | Protein_3627 | RtcB family protein | - |
| CA694_RS18455 (3853371) | 3853371..3853823 | - | 453 | WP_019842500.1 | GNAT family N-acetyltransferase | - |
| CA694_RS18460 (3853833) | 3853833..3854231 | - | 399 | WP_001263491.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| CA694_RS18465 (3854234) | 3854234..3854527 | - | 294 | WP_000554755.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| CA694_RS18470 (3854579) | 3854579..3855634 | - | 1056 | WP_001550655.1 | DNA polymerase IV | - |
| CA694_RS18475 (3855705) | 3855705..3856490 | - | 786 | WP_019842510.1 | putative lateral flagellar export/assembly protein LafU | - |
| CA694_RS18480 (3856462) | 3856462..3858174 | + | 1713 | Protein_3633 | flagellar biosynthesis protein FlhA | - |
| CA694_RS18485 (3858279) | 3858279..3858557 | + | 279 | WP_000598760.1 | type II toxin-antitoxin system HicA family toxin | - |
| CA694_RS18490 (3858550) | 3858550..3858906 | + | 357 | WP_001030484.1 | type II toxin-antitoxin system HicB family antitoxin | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|