MGE detailed information
MGE type: Conjugative plasmid MGE length: 45674 bp
Accession: NZ_CP042936 Location: 1..45674 Organism: Escherichia coli 042 Replicon: plasmid p2-Ec-BERN-042
Accession: NZ_CP042936 Location: 1..45674 Organism: Escherichia coli 042 Replicon: plasmid p2-Ec-BERN-042
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| - () | 19..79 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - () | 19..79 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - () | 19..79 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - () | 19..79 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - () | 19..79 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| FVF73_RS23200 () | 282..629 | + | 348 | Protein_1 | protein finQ | - |
| FVF73_RS23205 () | 815..1972 | + | 1158 | Protein_2 | IS1380 family transposase ISEcp1 | Transposase |
| FVF73_RS23210 () | 2028..2725 | + | 698 | Protein_3 | IS1 family transposase | - |
| FVF73_RS23215 () | 2739..3044 | - | 306 | Protein_4 | transcription termination factor NusG | - |
| FVF73_RS23225 () | 3486..3773 | - | 288 | WP_000074855.1 | conjugal transfer protein TraA | - |
| FVF73_RS23230 () | 3691..3954 | - | 264 | WP_032180564.1 | ash family protein | - |
| FVF73_RS23245 () | 4926..5957 | + | 1032 | WP_023518831.1 | RepZ | - |
| FVF73_RS23265 () | 7026..7535 | - | 510 | WP_012783913.1 | hypothetical protein | - |
| FVF73_RS23270 () | 7591..8193 | - | 603 | WP_001703912.1 | hypothetical protein | - |
| FVF73_RS23280 () | 8547..9893 | + | 1347 | WP_039052405.1 | hypothetical protein | - |
| FVF73_RS23730 () | 10400..10702 | - | 303 | WP_001245884.1 | hypothetical protein | - |
| FVF73_RS23295 () | 10699..11325 | - | 627 | WP_000587689.1 | ParA family plasmid-partitioning AAA ATPase | - |
| FVF73_RS23300 () | 11513..12277 | - | 765 | Protein_13 | translesion error-prone DNA polymerase V subunit UmuC | - |
| FVF73_RS23305 () | 12280..12519 | - | 240 | Protein_14 | peptidase | - |
| FVF73_RS23310 () | 12516..12650 | - | 135 | Protein_15 | DinI-like family protein | - |
| FVF73_RS23315 () | 12649..12957 | + | 309 | Protein_16 | DUF1380 family protein | - |
| FVF73_RS23320 () | 13002..13772 | + | 771 | WP_011264064.1 | hypothetical protein | - |
| FVF73_RS23330 () | 14313..14615 | + | 303 | WP_001671341.1 | antirestriction protein | - |
| FVF73_RS23335 () | 14662..15084 | + | 423 | WP_000271762.1 | DUF1380 family protein | - |
| FVF73_RS23340 () | 15081..15272 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| FVF73_RS23350 () | 15343..15657 | + | 315 | WP_001434357.1 | hypothetical protein | - |
| FVF73_RS23360 () | 16041..16115 | + | 75 | Protein_22 | single-stranded DNA-binding protein | - |
| FVF73_RS23365 () | 16116..16670 | + | 555 | Protein_23 | hypothetical protein | - |
| FVF73_RS23370 () | 16657..17010 | + | 354 | Protein_24 | plasmid SOS inhibition protein A | - |
| FVF73_RS23375 () | 17007..17603 | + | 597 | WP_000977995.1 | hypothetical protein | - |
| FVF73_RS23735 () | 18050..18436 | + | 387 | WP_190324863.1 | hypothetical protein | - |
| FVF73_RS23395 () | 18680..19114 | + | 435 | WP_000218858.1 | hypothetical protein | - |
| FVF73_RS23400 () | 19208..19474 | + | 267 | WP_000804663.1 | hypothetical protein | - |
| FVF73_RS23405 () | 19651..20040 | + | 390 | WP_000833767.1 | hypothetical protein | - |
| FVF73_RS23410 () | 20037..20939 | + | 903 | WP_011264057.1 | Recombination-promoting nuclease RpnA | VF |
| FVF73_RS23415 () | 21001..21207 | + | 207 | WP_000150314.1 | hypothetical protein | VF |
| FVF73_RS23420 () | 21238..21489 | - | 252 | WP_000148285.1 | helix-turn-helix domain-containing protein | - |
| FVF73_RS23425 () | 21523..21720 | - | 198 | WP_001161107.1 | hypothetical protein | - |
| FVF73_RS23435 () | 22069..22917 | + | 849 | WP_001599394.1 | DUF4942 domain-containing protein | - |
| FVF73_RS23440 () | 23004..23339 | - | 336 | WP_021529212.1 | hypothetical protein | - |
| FVF73_RS23445 () | 23573..23905 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| FVF73_RS23450 () | 23916..26615 | + | 2700 | WP_011264053.1 | Protein TraI | Relaxase |
| FVF73_RS23455 () | 26653..28944 | - | 2292 | WP_011264051.1 | hypothetical protein | - |
| FVF73_RS23460 () | 28937..30007 | - | 1071 | WP_011264050.1 | IncI1-type conjugal transfer protein TrbB | - |
| FVF73_RS23465 () | 30026..31234 | - | 1209 | WP_011264049.1 | IncI1-type conjugal transfer protein TrbA | - |
| - () | 31414..31471 | - | 58 | NuclAT_1 | - | - |
| - () | 31414..31471 | - | 58 | NuclAT_1 | - | - |
| - () | 31414..31471 | - | 58 | NuclAT_1 | - | - |
| - () | 31414..31471 | - | 58 | NuclAT_1 | - | - |
| - () | 31414..31471 | - | 58 | NuclAT_1 | - | - |
| FVF73_RS23470 () | 31541..32290 | - | 750 | Protein_41 | protein finQ | - |
| FVF73_RS23475 () | 32519..32836 | + | 318 | WP_000118520.1 | quaternary ammonium compound efflux SMR transporter SugE | - |
| FVF73_RS23480 () | 32833..33366 | - | 534 | WP_001221666.1 | lipocalin family protein | - |
| FVF73_RS23485 () | 33460..34605 | - | 1146 | WP_039023136.1 | Beta-lactamase | ARG |
| FVF73_RS23490 () | 35058..35755 | - | 698 | Protein_45 | IS1 family transposase | - |
| FVF73_RS23495 () | 35813..36385 | + | 573 | Protein_46 | hypothetical protein | VF |
| FVF73_RS23505 () | 36697..37851 | + | 1155 | WP_001139955.1 | integrase | - |
| FVF73_RS23510 () | 38002..38826 | + | 825 | WP_023518851.1 | hypothetical protein | - |
| FVF73_RS23515 () | 38912..40114 | + | 1203 | WP_000976351.1 | conjugal transfer protein TraF | - |
| FVF73_RS23520 () | 40174..40758 | + | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| FVF73_RS23525 () | 41153..41269 | + | 117 | Protein_51 | IncI1-type conjugal transfer lipoprotein TraH | - |
| FVF73_RS23530 () | 41268..43022 | + | 1755 | Protein_52 | DotA/TraY family protein | - |
| FVF73_RS23535 () | 43093..43755 | + | 663 | WP_000644796.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| FVF73_RS23540 () | 43827..44036 | - | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| FVF73_RS23740 () | 44428..44604 | + | 177 | WP_001054897.1 | hypothetical protein | - |
| FVF73_RS23545 () | 44669..44965 | - | 297 | WP_011264046.1 | hypothetical protein | - |
| FVF73_RS23550 () | 45265..45516 | + | 252 | WP_001291964.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|