MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 113908 bp
Accession: NZ_CP042902 Location: 1..113908 Organism: Escherichia coli strain CFSAN061762 Replicon: plasmid pCFSAN061762
Accession: NZ_CP042902 Location: 1..113908 Organism: Escherichia coli strain CFSAN061762 Replicon: plasmid pCFSAN061762
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CA898_RS23345 (CA898_023530) | 1099..1659 | - | 561 | WP_001161490.1 | recombinase family protein | - |
| CA898_RS23350 (CA898_023535) | 1969..3546 | + | 1578 | WP_001323889.1 | PAS domain-containing methyl-accepting chemotaxis protein | - |
| CA898_RS23355 (CA898_023540) | 3638..4130 | + | 493 | Protein_3 | IS1 family transposase | - |
| CA898_RS23360 (CA898_023545) | 4282..6279 | + | 1998 | WP_032213821.1 | choline BCCT transporter BetT | - |
| CA898_RS23365 (CA898_023555) | 6342..7619 | + | 1278 | WP_053921605.1 | DUF2254 domain-containing protein | - |
| CA898_RS23375 (CA898_023565) | 8392..8751 | - | 360 | Protein_7 | DUF4158 domain-containing protein | - |
| CA898_RS23380 (CA898_023570) | 8911..9495 | + | 585 | WP_053921599.1 | recombinase family protein | - |
| CA898_RS23385 (CA898_023575) | 9884..11362 | + | 1479 | WP_000927305.1 | SulP family inorganic anion transporter | - |
| CA898_RS23390 (CA898_023580) | 11381..12208 | + | 828 | WP_053921598.1 | universal stress protein | - |
| CA898_RS23395 (CA898_023585) | 12407..13411 | + | 1005 | WP_000427619.1 | IS110-like element IS5075 family transposase | - |
| CA898_RS24090 | 13683..13769 | - | 87 | Protein_12 | Arm DNA-binding domain-containing protein | - |
| CA898_RS23405 (CA898_023600) | 14099..14914 | + | 816 | WP_001043260.1 | sulfonamide-resistant dihydropteroate synthase Sul2 | - |
| CA898_RS23410 (CA898_023605) | 14975..15778 | + | 804 | WP_001082319.1 | aminoglycoside O-phosphotransferase APH(3'')-Ib | - |
| CA898_RS23415 (CA898_023610) | 15778..16614 | + | 837 | WP_000480968.1 | aminoglycoside O-phosphotransferase APH(6)-Id | - |
| CA898_RS23420 (CA898_023615) | 16721..17125 | - | 405 | Protein_16 | IS91 family transposase | - |
| CA898_RS23425 (CA898_023620) | 17574..17816 | + | 243 | WP_024203663.1 | hypothetical protein | - |
| CA898_RS23430 (CA898_023625) | 17848..18498 | - | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| CA898_RS23435 (CA898_023630) | 18604..19803 | + | 1200 | WP_000804064.1 | tetracycline efflux MFS transporter Tet(A) | - |
| CA898_RS23440 (CA898_023635) | 19835..20488 | - | 654 | Protein_20 | EamA family transporter | - |
| CA898_RS23445 (CA898_023645) | 21190..22170 | - | 981 | WP_000019448.1 | IS5-like element ISKpn26 family transposase | - |
| CA898_RS23450 (CA898_023650) | 22311..23171 | - | 861 | WP_000027057.1 | broad-spectrum class A beta-lactamase TEM-1 | - |
| CA898_RS23455 (CA898_023655) | 23354..23911 | - | 558 | WP_001235713.1 | recombinase family protein | - |
| CA898_RS23460 (CA898_023660) | 24075..24293 | + | 219 | WP_001143771.1 | DUF4158 domain-containing protein | - |
| CA898_RS23465 (CA898_023665) | 24475..25736 | + | 1262 | Protein_25 | IS1380-like element ISEcp1 family transposase | - |
| CA898_RS23470 (CA898_023670) | 25992..26867 | + | 876 | WP_000239590.1 | extended-spectrum class A beta-lactamase CTX-M-15 | - |
| CA898_RS23475 (CA898_023675) | 26914..27207 | - | 294 | WP_116961751.1 | WbuC family cupin fold metalloprotein | - |
| CA898_RS23480 (CA898_023680) | 27272..30055 | + | 2784 | Protein_28 | Tn3-like element Tn3 family transposase | - |
| CA898_RS23485 (CA898_023685) | 30098..31113 | - | 1016 | Protein_29 | IS3 family transposase | - |
| CA898_RS23490 (CA898_023690) | 31508..32164 | + | 657 | WP_001516695.1 | quinolone resistance pentapeptide repeat protein QnrS1 | - |
| CA898_RS23495 (CA898_023695) | 32483..32911 | - | 429 | Protein_31 | recombinase family protein | - |
| CA898_RS23500 (CA898_023700) | 32944..34335 | - | 1392 | WP_001493761.1 | ISKra4-like element ISKpn19 family transposase | - |
| CA898_RS23505 (CA898_023705) | 34372..34944 | - | 573 | WP_001493762.1 | recombinase family protein | - |
| CA898_RS23510 (CA898_023710) | 35081..35626 | - | 546 | WP_001493763.1 | plasmid pRiA4b ORF-3 family protein | - |
| CA898_RS23515 (CA898_023715) | 35761..35922 | - | 162 | Protein_35 | type II toxin-antitoxin system mRNA interferase RelE | - |
| CA898_RS23520 (CA898_023720) | 35922..36161 | - | 240 | WP_000534857.1 | type II toxin-antitoxin system antitoxin RelB | - |
| CA898_RS24095 | 36186..36296 | + | 111 | Protein_37 | hypothetical protein | - |
| CA898_RS23525 | 36503..36652 | + | 150 | WP_000550473.1 | hypothetical protein | - |
| CA898_RS23530 (CA898_023725) | 36696..37769 | + | 1074 | WP_000557466.1 | hypothetical protein | - |
| CA898_RS23535 (CA898_023730) | 38033..38737 | + | 705 | WP_001067852.1 | IS6-like element IS26 family transposase | - |
| CA898_RS23540 (CA898_023740) | 38792..40342 | + | 1551 | Protein_41 | Tn3-like element TnAs1 family transposase | - |
| CA898_RS23545 (CA898_023750) | 40688..41665 | - | 978 | WP_000600827.1 | tyrosine-type recombinase/integrase | - |
| CA898_RS23550 (CA898_023755) | 41857..42214 | + | 358 | Protein_43 | IS1 family transposase | - |
| CA898_RS23555 (CA898_023765) | 43073..44791 | - | 1719 | WP_000739198.1 | hybrid sensor histidine kinase/response regulator | - |
| CA898_RS23560 (CA898_023770) | 44788..45276 | - | 489 | WP_000238872.1 | molybdopterin-dependent oxidoreductase | - |
| CA898_RS23565 (CA898_023775) | 45269..46252 | - | 984 | WP_032201035.1 | hypothetical protein | - |
| CA898_RS23570 (CA898_023780) | 46256..47161 | - | 906 | WP_011264037.1 | helix-turn-helix domain-containing protein | - |
| CA898_RS23575 (CA898_023785) | 47484..47792 | + | 309 | WP_000062770.1 | hypothetical protein | - |
| CA898_RS23580 (CA898_023790) | 47785..48000 | + | 216 | WP_001112907.1 | hypothetical protein | - |
| CA898_RS23585 (CA898_023795) | 48003..48665 | + | 663 | WP_000958205.1 | lytic transglycosylase domain-containing protein | - |
| CA898_RS23590 (CA898_023800) | 48676..48975 | + | 300 | WP_000175462.1 | TrbC/VirB2 family protein | - |
| CA898_RS23595 (CA898_023805) | 48985..51735 | + | 2751 | WP_032201036.1 | VirB3 family type IV secretion system protein | - |
| CA898_RS23600 (CA898_023810) | 51754..52470 | + | 717 | WP_000770034.1 | type IV secretion system protein | - |
| CA898_RS23605 (CA898_023815) | 52482..52766 | + | 285 | WP_000769859.1 | EexN family lipoprotein | - |
| CA898_RS23610 (CA898_023820) | 52784..53791 | + | 1008 | WP_032201037.1 | type IV secretion system protein | - |
| CA898_RS23615 | 53868..54008 | + | 141 | WP_000873539.1 | hypothetical protein | - |
| CA898_RS23620 (CA898_023825) | 54001..54687 | + | 687 | WP_001293055.1 | type IV secretion system protein | - |
| CA898_RS23625 (CA898_023830) | 54680..55573 | + | 894 | WP_001045307.1 | P-type conjugative transfer protein VirB9 | - |
| CA898_RS23630 (CA898_023835) | 55570..56766 | + | 1197 | WP_000980841.1 | VirB10/TraB/TrbI family type IV secretion system protein | - |
| CA898_RS23635 (CA898_023840) | 56770..57819 | + | 1050 | WP_000342114.1 | P-type DNA transfer ATPase VirB11 | - |
| CA898_RS23640 (CA898_023845) | 57806..58207 | + | 402 | WP_000979494.1 | cag pathogenicity island Cag12 family protein | - |
| CA898_RS23645 (CA898_023850) | 58298..58615 | + | 318 | WP_000683352.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| CA898_RS23650 (CA898_023855) | 58642..58977 | + | 336 | WP_000610141.1 | hypothetical protein | - |
| CA898_RS23655 (CA898_023860) | 58953..59261 | + | 309 | WP_000212005.1 | hypothetical protein | - |
| CA898_RS23660 (CA898_023865) | 59258..61459 | + | 2202 | WP_001241818.1 | type IA DNA topoisomerase | - |
| CA898_RS23665 (CA898_023870) | 61456..61848 | + | 393 | WP_001079960.1 | H-NS family nucleoid-associated regulatory protein | - |
| CA898_RS23670 (CA898_023875) | 62557..64464 | + | 1908 | WP_000575554.1 | type IV secretion system DNA-binding domain-containing protein | - |
| CA898_RS23675 (CA898_023880) | 64479..65225 | + | 747 | WP_000909125.1 | MobC family replication-relaxation protein | - |
| CA898_RS23680 (CA898_023885) | 65218..65745 | + | 528 | WP_001232861.1 | phospholipase D family protein | - |
| CA898_RS23685 (CA898_023890) | 65777..66208 | - | 432 | WP_001531161.1 | hypothetical protein | - |
| CA898_RS23690 | 66340..66516 | - | 177 | WP_013438824.1 | hypothetical protein | - |
| CA898_RS23695 (CA898_023895) | 66688..67653 | - | 966 | WP_001743098.1 | zincin-like metallopeptidase domain-containing protein | - |
| CA898_RS23700 (CA898_023900) | 68108..69328 | - | 1221 | Protein_73 | ISL3-like element ISKox3 family transposase | - |
| CA898_RS23705 (CA898_023905) | 69429..69854 | + | 426 | WP_000668788.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| CA898_RS23710 (CA898_023910) | 69854..71125 | + | 1272 | WP_000457544.1 | Y-family DNA polymerase | - |
| CA898_RS23715 (CA898_023915) | 71204..71455 | + | 252 | WP_000181753.1 | hypothetical protein | - |
| CA898_RS23720 (CA898_023920) | 71509..71814 | + | 306 | WP_000534920.1 | hypothetical protein | - |
| CA898_RS23725 (CA898_023935) | 72848..73819 | - | 972 | WP_000817037.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| CA898_RS23730 (CA898_023940) | 73819..74985 | - | 1167 | WP_000523812.1 | plasmid-partitioning protein SopA | - |
| CA898_RS23735 (CA898_023945) | 75726..76736 | + | 1011 | WP_000200069.1 | RepB family plasmid replication initiator protein | - |
| CA898_RS23740 (CA898_023955) | 77548..77871 | - | 324 | Protein_81 | lipocalin family protein | - |
| CA898_RS23745 (CA898_023960) | 77989..78714 | + | 726 | WP_000331736.1 | MerR family transcriptional regulator | - |
| CA898_RS23750 (CA898_023965) | 78814..79224 | + | 411 | WP_000750473.1 | hydroxyisourate hydrolase | - |
| CA898_RS23755 (CA898_023970) | 79327..80286 | + | 960 | WP_000208728.1 | DUF523 and DUF1722 domain-containing protein | - |
| CA898_RS23760 (CA898_023975) | 80432..81520 | + | 1089 | WP_000633445.1 | AAA family ATPase | - |
| CA898_RS23765 (CA898_023980) | 81583..82287 | - | 705 | WP_001067852.1 | IS6-like element IS26 family transposase | - |
| CA898_RS23770 (CA898_023985) | 82278..82766 | + | 489 | WP_072075272.1 | replication initiation protein | - |
| CA898_RS23775 (CA898_023995) | 84723..85292 | - | 570 | WP_001749988.1 | recombinase family protein | - |
| CA898_RS23780 (CA898_024005) | 85685..86698 | - | 1014 | WP_000845048.1 | class 1 integron integrase IntI1 | - |
| CA898_RS23785 (CA898_024010) | 86854..87327 | + | 474 | WP_004201280.1 | trimethoprim-resistant dihydrofolate reductase DfrA14 | - |
| CA898_RS23790 (CA898_024015) | 87574..88278 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| CA898_RS23795 (CA898_024025) | 88330..90096 | + | 1767 | Protein_92 | Tn3 family transposase | - |
| CA898_RS23800 (CA898_024030) | 90175..91179 | + | 1005 | WP_000427619.1 | IS110-like element IS5075 family transposase | - |
| CA898_RS23805 (CA898_024040) | 91845..91967 | + | 123 | Protein_94 | serine/threonine protein kinase | - |
| CA898_RS23810 (CA898_024045) | 92088..92828 | + | 741 | WP_001066941.1 | tyrosine-type recombinase/integrase | - |
| CA898_RS23815 (CA898_024050) | 93107..94084 | - | 978 | WP_000361612.1 | RepB family plasmid replication initiator protein | - |
| CA898_RS23820 (CA898_024060) | 94841..95813 | + | 973 | Protein_97 | hypothetical protein | - |
| CA898_RS23825 (CA898_024065) | 95972..96328 | - | 357 | WP_225568154.1 | abortive infection family protein | - |
| CA898_RS23830 (CA898_024070) | 96408..97105 | + | 698 | WP_226458177.1 | IS1-like element IS1A family transposase | - |
| CA898_RS23835 (CA898_024075) | 97122..97469 | + | 348 | Protein_100 | ABC transporter permease subunit | - |
| CA898_RS23840 (CA898_024080) | 97481..98527 | + | 1047 | WP_000192349.1 | ferric ABC transporter ATP-binding protein | - |
| CA898_RS23845 (CA898_024085) | 98636..99568 | - | 933 | WP_000081352.1 | homocysteine S-methyltransferase | - |
| CA898_RS23850 (CA898_024090) | 99555..100958 | - | 1404 | WP_001373486.1 | S-methylmethionine permease | - |
| CA898_RS23855 (CA898_024095) | 101202..102182 | + | 981 | Protein_104 | IS5 family transposase | - |
| CA898_RS23860 (CA898_024100) | 102392..102727 | + | 336 | WP_169329198.1 | type I deoxyribonuclease HsdR | - |
| CA898_RS23865 (CA898_024105) | 102677..103090 | - | 414 | Protein_106 | integrase core domain-containing protein | - |
| CA898_RS23870 (CA898_024110) | 103095..103373 | - | 279 | Protein_107 | pdcB | - |
| CA898_RS23875 (CA898_024115) | 103401..103580 | - | 180 | WP_001513661.1 | hypothetical protein | - |
| CA898_RS23880 (CA898_024120) | 103585..103965 | - | 381 | WP_001216034.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| CA898_RS23885 (CA898_024125) | 103965..104186 | - | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| CA898_RS23890 (CA898_024130) | 104449..105146 | + | 698 | WP_226458177.1 | IS1-like element IS1A family transposase | - |
| CA898_RS23895 (CA898_024135) | 105333..105626 | - | 294 | WP_226438991.1 | biofilm development regulator YmgB/AriR family protein | - |
| CA898_RS23900 (CA898_024140) | 105930..106034 | - | 105 | Protein_113 | IS3 family transposase | - |
| CA898_RS24100 | 106061..106210 | - | 150 | Protein_114 | IS3 family transposase | - |
| CA898_RS23910 (CA898_024150) | 107424..108038 | + | 615 | WP_032214276.1 | acid-sensing system DNA-binding response regulator EvgA | - |
| CA898_RS23915 (CA898_024155) | 108043..111636 | + | 3594 | WP_053921595.1 | acid-sensing system histidine kinase EvgS | - |
| CA898_RS23920 (CA898_024160) | 111752..112059 | + | 308 | Protein_118 | IS1-like element transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|