MGE detailed information
MGE type: Genomic_island MGE length: 31202 bp
Accession: NZ_CP042901 Location: 1090117..1121318 Organism: Escherichia coli strain CFSAN061762 Replicon: chromosome
Accession: NZ_CP042901 Location: 1090117..1121318 Organism: Escherichia coli strain CFSAN061762 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CA898_RS05250 (1086301) | 1086301..1087569 | - | 1269 | WP_000271962.1 | L-2-hydroxyglutarate oxidase | - |
| CA898_RS05255 (1087589) | 1087589..1088566 | - | 978 | WP_000993126.1 | glutarate dioxygenase GlaH | - |
| CA898_RS05260 (1088902) | 1088902..1091154 | - | 2253 | Protein_1029 | alpha-amylase family glycosyl hydrolase | - |
| CA898_RS05270 (1092540) | 1092540..1093913 | + | 1374 | Protein_1030 | DUF5507 domain-containing protein | - |
| CA898_RS05275 (1094259) | 1094259..1094417 | + | 159 | Protein_1031 | recombinase family protein | - |
| CA898_RS05280 (1094641) | 1094641..1094760 | + | 120 | WP_001120794.1 | hypothetical protein | - |
| CA898_RS05285 (1094825) | 1094825..1096867 | + | 2043 | Protein_1033 | adhesin-like autotransporter YpjA/EhaD | - |
| CA898_RS05295 (1097638) | 1097638..1099080 | + | 1443 | Protein_1035 | adhesin-like autotransporter YpjA/EhaD | - |
| CA898_RS05300 (1099444) | 1099444..1099773 | - | 330 | WP_032233536.1 | TA system toxin CbtA family protein | Toxin Detail |
| CA898_RS05305 (1099830) | 1099830..1100195 | - | 366 | WP_089660289.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| CA898_RS05310 (1100218) | 1100218..1100439 | - | 222 | WP_089660291.1 | DUF987 domain-containing protein | - |
| CA898_RS05315 (1100451) | 1100451..1100930 | - | 480 | WP_032233532.1 | DNA repair protein RadC | - |
| CA898_RS05320 (1100942) | 1100942..1101421 | - | 480 | WP_032233540.1 | antirestriction protein | - |
| CA898_RS05325 (1101681) | 1101681..1102499 | - | 819 | WP_032233530.1 | DUF932 domain-containing protein | - |
| CA898_RS05330 (1102595) | 1102595..1102828 | - | 234 | WP_032233528.1 | DUF905 domain-containing protein | - |
| CA898_RS05335 (1102922) | 1102922..1103758 | - | 837 | WP_089660293.1 | hypothetical protein | - |
| CA898_RS05340 (1103816) | 1103816..1103980 | - | 165 | WP_157903690.1 | hypothetical protein | - |
| CA898_RS05345 (1104061) | 1104061..1104288 | - | 228 | WP_032233523.1 | hypothetical protein | - |
| CA898_RS05350 (1104359) | 1104359..1104766 | - | 408 | WP_032233521.1 | hypothetical protein | - |
| CA898_RS05355 (1104979) | 1104979..1105866 | - | 888 | WP_032233519.1 | 50S ribosome-binding GTPase | - |
| CA898_RS05360 (1106195) | 1106195..1107643 | + | 1449 | WP_089660297.1 | YfjI family protein | - |
| CA898_RS05365 (1108074) | 1108074..1108658 | + | 585 | WP_032233516.1 | inovirus Gp2 family protein | - |
| CA898_RS05370 (1109117) | 1109117..1111057 | + | 1941 | WP_116335582.1 | P-loop NTPase fold protein | - |
| CA898_RS05375 (1111058) | 1111058..1111900 | + | 843 | WP_126722366.1 | hypothetical protein | - |
| CA898_RS05380 (1111897) | 1111897..1113270 | + | 1374 | WP_061362459.1 | hypothetical protein | - |
| CA898_RS05385 (1113267) | 1113267..1114046 | + | 780 | WP_032233377.1 | TatD family hydrolase | - |
| CA898_RS05390 (1114180) | 1114180..1114980 | + | 801 | WP_032233378.1 | hypothetical protein | - |
| CA898_RS05395 (1114973) | 1114973..1118260 | + | 3288 | WP_116335581.1 | DEAD/DEAH box helicase | - |
| CA898_RS05400 (1118349) | 1118349..1118561 | - | 213 | WP_116335580.1 | AlpA family phage regulatory protein | - |
| CA898_RS05405 (1118678) | 1118678..1119430 | + | 753 | WP_116335579.1 | hypothetical protein | - |
| CA898_RS05410 (1119472) | 1119472..1120713 | - | 1242 | WP_032233384.1 | integrase | - |
| CA898_RS05420 (1121494) | 1121494..1121976 | - | 483 | WP_000162574.1 | SsrA-binding protein SmpB | - |
| CA898_RS05425 (1122147) | 1122147..1122584 | + | 438 | WP_001300750.1 | type II toxin-antitoxin system toxin RatA | - |
| CA898_RS05430 (1122574) | 1122574..1122864 | + | 291 | WP_001117838.1 | RnfH family protein | - |
| CA898_RS05435 (1122926) | 1122926..1123267 | - | 342 | WP_001203437.1 | outer membrane protein assembly factor BamE | - |
| CA898_RS05440 (1123416) | 1123416..1125077 | - | 1662 | WP_000880910.1 | DNA repair protein RecN | - |
| CA898_RS05445 (1125163) | 1125163..1126041 | - | 879 | WP_001059169.1 | NAD(+) kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|