MGE detailed information
MGE type: Genomic_island MGE length: 22659 bp
Accession: NZ_CP042867 Location: 596343..619001 Organism: Escherichia coli strain ATCC BAA-196 Replicon: chromosome
Accession: NZ_CP042867 Location: 596343..619001 Organism: Escherichia coli strain ATCC BAA-196 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BAA196FS_RS02885 () | 591793..592653 | + | 861 | WP_000809262.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| BAA196FS_RS02890 () | 592696..593787 | - | 1092 | WP_000816992.1 | fimbrial protein | - |
| BAA196FS_RS02895 () | 593798..596314 | - | 2517 | WP_001355538.1 | fimbrial biogenesis outer membrane usher protein | - |
| BAA196FS_RS02900 () | 596343..597038 | - | 696 | WP_000044775.1 | hypothetical protein | VF |
| BAA196FS_RS02905 () | 597118..597702 | - | 585 | WP_001045432.1 | type 1 fimbrial protein | - |
| BAA196FS_RS02910 () | 598103..598858 | - | 756 | WP_001311150.1 | galactosamine-6-phosphate isomerase | - |
| BAA196FS_RS02915 () | 598859..599650 | - | 792 | WP_000534347.1 | PTS N-acetylgalactosamine transporter subunit IID | - |
| BAA196FS_RS02920 () | 599640..600443 | - | 804 | WP_000544489.1 | PTS N-acetylgalactosamine transporter subunit IIC | - |
| BAA196FS_RS02925 () | 600482..600958 | - | 477 | WP_000203711.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| BAA196FS_RS02930 () | 601125..601985 | - | 861 | WP_000022766.1 | tagatose-bisphosphate aldolase subunit KbaY | - |
| BAA196FS_RS02935 () | 601998..603152 | - | 1155 | WP_001114869.1 | AgaS family sugar isomerase | - |
| BAA196FS_RS02940 () | 603503..604060 | - | 558 | Protein_568 | amidohydrolase family protein | - |
| BAA196FS_RS02945 () | 604056..604427 | - | 372 | Protein_569 | PTS sugar transporter subunit IIC | - |
| BAA196FS_RS02950 () | 604438..604911 | - | 474 | WP_001336162.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| BAA196FS_RS02955 () | 604934..606214 | - | 1281 | WP_000681920.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| BAA196FS_RS02960 () | 606463..607272 | + | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| BAA196FS_RS02965 () | 607327..607791 | - | 465 | WP_000347273.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| BAA196FS_RS02970 () | 607791..608126 | - | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| BAA196FS_RS02975 () | 608275..609846 | - | 1572 | WP_001273753.1 | galactarate dehydratase | - |
| BAA196FS_RS02980 () | 610221..611555 | + | 1335 | WP_000599636.1 | galactarate/glucarate/glycerate transporter GarP | - |
| BAA196FS_RS02985 () | 611571..612341 | + | 771 | WP_001058209.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| BAA196FS_RS02990 () | 612371..613261 | + | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| BAA196FS_RS02995 () | 613358..614503 | + | 1146 | WP_001300387.1 | glycerate 2-kinase | - |
| BAA196FS_RS03005 () | 615526..616713 | - | 1188 | WP_000484600.1 | YhaC family protein | - |
| BAA196FS_RS03010 () | 616735..617274 | - | 540 | WP_000675733.1 | hypothetical protein | - |
| BAA196FS_RS03015 () | 617530..617874 | - | 345 | WP_000145840.1 | transcriptional activator TdcR | - |
| BAA196FS_RS03020 () | 618063..619001 | + | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| BAA196FS_RS03025 () | 619100..620089 | + | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| BAA196FS_RS03030 () | 620111..621442 | + | 1332 | WP_000107723.1 | threonine/serine transporter TdcC | - |
| BAA196FS_RS03035 () | 621468..622676 | + | 1209 | WP_001295545.1 | propionate kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|