MGE detailed information
MGE type: Genomic_island MGE length: 22659 bp
Accession: NZ_CP042865 Location: 596439..619097 Organism: Escherichia coli strain ATCC BAA-196 Replicon: chromosome
Accession: NZ_CP042865 Location: 596439..619097 Organism: Escherichia coli strain ATCC BAA-196 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BAA196NC_RS02885 () | 591889..592749 | + | 861 | WP_000809262.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| BAA196NC_RS02890 () | 592792..593883 | - | 1092 | WP_000816992.1 | fimbrial protein | - |
| BAA196NC_RS02895 () | 593894..596410 | - | 2517 | WP_001355538.1 | fimbrial biogenesis outer membrane usher protein | - |
| BAA196NC_RS02900 () | 596439..597134 | - | 696 | WP_000044775.1 | hypothetical protein | VF |
| BAA196NC_RS02905 () | 597214..597798 | - | 585 | WP_001045432.1 | type 1 fimbrial protein | - |
| BAA196NC_RS02910 () | 598199..598954 | - | 756 | WP_001311150.1 | galactosamine-6-phosphate isomerase | - |
| BAA196NC_RS02915 () | 598955..599746 | - | 792 | WP_000534347.1 | PTS N-acetylgalactosamine transporter subunit IID | - |
| BAA196NC_RS02920 () | 599736..600539 | - | 804 | WP_000544489.1 | PTS N-acetylgalactosamine transporter subunit IIC | - |
| BAA196NC_RS02925 () | 600578..601054 | - | 477 | WP_000203711.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| BAA196NC_RS02930 () | 601221..602081 | - | 861 | WP_000022766.1 | tagatose-bisphosphate aldolase subunit KbaY | - |
| BAA196NC_RS02935 () | 602094..603248 | - | 1155 | WP_001114869.1 | AgaS family sugar isomerase | - |
| BAA196NC_RS02940 () | 603599..604156 | - | 558 | Protein_572 | amidohydrolase family protein | - |
| BAA196NC_RS02945 () | 604152..604523 | - | 372 | Protein_573 | PTS sugar transporter subunit IIC | - |
| BAA196NC_RS02950 () | 604534..605007 | - | 474 | WP_001336162.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| BAA196NC_RS02955 () | 605030..606310 | - | 1281 | WP_000681920.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| BAA196NC_RS02960 () | 606559..607368 | + | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| BAA196NC_RS02965 () | 607423..607887 | - | 465 | WP_000347273.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| BAA196NC_RS02970 () | 607887..608222 | - | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| BAA196NC_RS02975 () | 608371..609942 | - | 1572 | WP_001273753.1 | galactarate dehydratase | - |
| BAA196NC_RS02980 () | 610317..611651 | + | 1335 | WP_000599636.1 | galactarate/glucarate/glycerate transporter GarP | - |
| BAA196NC_RS02985 () | 611667..612437 | + | 771 | WP_001058209.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| BAA196NC_RS02990 () | 612467..613357 | + | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| BAA196NC_RS02995 () | 613454..614599 | + | 1146 | WP_001300387.1 | glycerate 2-kinase | - |
| BAA196NC_RS03005 () | 615622..616809 | - | 1188 | WP_000484600.1 | YhaC family protein | - |
| BAA196NC_RS03010 () | 616831..617370 | - | 540 | WP_000675733.1 | hypothetical protein | - |
| BAA196NC_RS24475 () | 617626..617844 | - | 219 | WP_001301311.1 | transcriptional activator TdcR | - |
| BAA196NC_RS03020 () | 618159..619097 | + | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| BAA196NC_RS03025 () | 619196..620185 | + | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| BAA196NC_RS03030 () | 620207..621538 | + | 1332 | WP_000107723.1 | threonine/serine transporter TdcC | - |
| BAA196NC_RS03035 () | 621564..622772 | + | 1209 | WP_001295545.1 | propionate kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|