MGE detailed information
MGE type: Genomic_island MGE length: 19253 bp
Accession: NZ_CP042865 Location: 4020033..4039285 Organism: Escherichia coli strain ATCC BAA-196 Replicon: chromosome
Accession: NZ_CP042865 Location: 4020033..4039285 Organism: Escherichia coli strain ATCC BAA-196 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BAA196NC_RS19655 () | 4015512..4016015 | - | 504 | WP_000870592.1 | type 1 fimbria minor subunit FimG | - |
| BAA196NC_RS19660 () | 4016028..4016558 | - | 531 | WP_001244827.1 | type 1 fimbria minor subunit FimF | - |
| BAA196NC_RS19665 () | 4016568..4019204 | - | 2637 | WP_000121005.1 | fimbrial usher FimD | - |
| BAA196NC_RS19670 () | 4019271..4019996 | - | 726 | WP_000066547.1 | type 1 fimbria chaperone FimC | - |
| BAA196NC_RS19675 () | 4020033..4020572 | - | 540 | WP_000824114.1 | hypothetical protein | VF |
| BAA196NC_RS19680 () | 4020637..4021185 | - | 549 | WP_000695564.1 | hypothetical protein | VF |
| BAA196NC_RS19685 () | 4021667..4022263 | - | 597 | WP_000044711.1 | Tyrosine recombinase XerC | VF |
| BAA196NC_RS19690 () | 4022741..4023343 | - | 603 | WP_000790583.1 | Tyrosine recombinase XerC | VF |
| BAA196NC_RS19695 () | 4024799..4025515 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| BAA196NC_RS19700 () | 4025535..4026641 | + | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| BAA196NC_RS19705 () | 4026706..4027686 | + | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| BAA196NC_RS19710 () | 4028269..4029509 | - | 1241 | Protein_3840 | helicase YjhR | - |
| BAA196NC_RS19715 () | 4029625..4029870 | + | 246 | Protein_3841 | GNAT family N-acetyltransferase | - |
| BAA196NC_RS19720 () | 4030247..4030504 | + | 258 | WP_001054376.1 | hypothetical protein | Toxin Detail |
| BAA196NC_RS19725 () | 4030516..4031061 | + | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| BAA196NC_RS19730 () | 4031117..4031863 | + | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| BAA196NC_RS19735 () | 4032032..4032250 | + | 219 | Protein_3845 | hypothetical protein | - |
| BAA196NC_RS24610 () | 4032288..4032404 | + | 117 | Protein_3846 | VOC family protein | - |
| BAA196NC_RS19740 () | 4032649..4033770 | + | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| BAA196NC_RS19745 () | 4033767..4034045 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB | - |
| BAA196NC_RS19750 () | 4034057..4035370 | + | 1314 | WP_000460843.1 | galactitol-specific PTS transporter subunit IIC | - |
| BAA196NC_RS19755 () | 4035383..4036189 | + | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
| BAA196NC_RS19760 () | 4036320..4036751 | + | 432 | WP_000606406.1 | PTS sugar transporter subunit IIA | - |
| BAA196NC_RS19765 () | 4036763..4037395 | + | 633 | WP_000600622.1 | ribulose-phosphate 3 epimerase family protein | - |
| BAA196NC_RS19770 () | 4037412..4038194 | + | 783 | WP_000082780.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| BAA196NC_RS19775 () | 4038497..4039285 | + | 789 | WP_000251798.1 | IclR family transcriptional regulator | - |
| BAA196NC_RS19780 () | 4039290..4040195 | + | 906 | WP_000714563.1 | dihydrodipicolinate synthase family protein | - |
| BAA196NC_RS19785 () | 4040206..4042173 | + | 1968 | WP_000116326.1 | xylonate dehydratase YjhG | - |
| BAA196NC_RS19790 () | 4042280..4043629 | + | 1350 | WP_001128363.1 | GntP family permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|