MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 44150 bp
Accession: NZ_CP041944 Location: 1726406..1770555 Organism: Lacticaseibacillus paracasei strain NJ Replicon: chromosome
Accession: NZ_CP041944 Location: 1726406..1770555 Organism: Lacticaseibacillus paracasei strain NJ Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FO269_RS09025 () | 1721654..1722475 | + | 822 | WP_016376169.1 | 1,4-dihydroxy-2-naphthoyl-CoA synthase | - |
| FO269_RS09030 () | 1722485..1723909 | + | 1425 | WP_144182124.1 | o-succinylbenzoate--CoA ligase | - |
| FO269_RS09035 () | 1723956..1725149 | + | 1194 | WP_144182125.1 | MFS transporter | - |
| FO269_RS09040 () | 1725251..1725499 | - | 249 | Protein_1629 | IS30 family transposase | - |
| FO269_RS09045 () | 1725634..1727058 | + | 1425 | WP_144182126.1 | IS5-like element ISLrh3 family transposase | - |
| FO269_RS09050 () | 1727070..1728431 | + | 1362 | Protein_1631 | phage tail protein | - |
| FO269_RS09055 () | 1728445..1729374 | - | 930 | WP_144182127.1 | IS30 family transposase ISLpl1 | Transposase |
| FO269_RS09060 () | 1729638..1730135 | + | 498 | WP_144182213.1 | hypothetical protein | - |
| FO269_RS09065 () | 1730212..1730733 | + | 522 | WP_016366579.1 | hypothetical protein | - |
| FO269_RS09075 () | 1730893..1731891 | + | 999 | WP_128538125.1 | IS30 family transposase ISApl1 | Transposase |
| FO269_RS09080 () | 1732063..1732986 | - | 924 | WP_076652525.1 | conjugal transfer protein | - |
| FO269_RS09085 () | 1732983..1733516 | - | 534 | WP_144182128.1 | hypothetical protein | - |
| FO269_RS09090 () | 1733526..1734521 | - | 996 | WP_144182129.1 | putative endopeptidase p60 | VF |
| FO269_RS09095 () | 1734518..1736611 | - | 2094 | WP_144182130.1 | conjugal transfer protein | - |
| FO269_RS09100 () | 1736598..1739063 | - | 2466 | WP_016387580.1 | ATP-binding protein | - |
| FO269_RS09105 () | 1739047..1739439 | - | 393 | WP_010491186.1 | conjugal transfer protein | - |
| FO269_RS09110 () | 1739501..1739998 | - | 498 | WP_144182131.1 | antirestriction protein ArdA | - |
| FO269_RS09115 () | 1740002..1740223 | - | 222 | WP_003606383.1 | hypothetical protein | - |
| FO269_RS09120 () | 1740379..1741056 | - | 678 | WP_144182132.1 | site-specific DNA-methyltransferase | - |
| FO269_RS09125 () | 1741187..1741513 | - | 327 | WP_010491196.1 | hypothetical protein | - |
| FO269_RS09130 () | 1741503..1742693 | - | 1191 | WP_076652513.1 | XRE family transcriptional regulator | - |
| FO269_RS09135 () | 1743009..1743269 | - | 261 | WP_144182133.1 | hypothetical protein | - |
| FO269_RS09140 () | 1743266..1743541 | - | 276 | WP_019898231.1 | hypothetical protein | - |
| FO269_RS09145 () | 1743552..1744919 | - | 1368 | WP_144182134.1 | DUF87 domain-containing protein | - |
| FO269_RS09150 () | 1744916..1745203 | - | 288 | WP_016376177.1 | hypothetical protein | - |
| FO269_RS09155 () | 1745223..1745471 | - | 249 | WP_144182135.1 | hypothetical protein | - |
| FO269_RS09160 () | 1745506..1745745 | - | 240 | WP_010491209.1 | hypothetical protein | - |
| FO269_RS09165 () | 1745756..1746019 | - | 264 | WP_016387575.1 | hypothetical protein | - |
| FO269_RS09170 () | 1746097..1746468 | - | 372 | WP_144182136.1 | YdcP family protein | - |
| FO269_RS09175 () | 1746486..1746809 | - | 324 | WP_016376174.1 | DUF961 family protein | - |
| FO269_RS09180 () | 1746851..1747093 | - | 243 | WP_019898235.1 | hypothetical protein | - |
| FO269_RS09185 () | 1747095..1750885 | - | 3791 | Protein_1657 | hypothetical protein | VF |
| FO269_RS09195 () | 1751593..1752021 | - | 429 | WP_003567685.1 | hypothetical protein | - |
| FO269_RS09200 () | 1752121..1752798 | + | 678 | WP_052916118.1 | hypothetical protein | - |
| FO269_RS09205 () | 1752795..1753442 | - | 648 | WP_016381902.1 | hypothetical protein | - |
| FO269_RS09215 () | 1753559..1753756 | + | 198 | WP_013246092.1 | hypothetical protein | - |
| FO269_RS09220 () | 1753822..1754586 | + | 765 | WP_003581098.1 | hypothetical protein | - |
| FO269_RS09225 () | 1754647..1756035 | + | 1389 | WP_144182137.1 | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase | - |
| FO269_RS15910 () | 1756066..1756209 | + | 144 | WP_016380391.1 | hypothetical protein | - |
| FO269_RS09230 () | 1756335..1757843 | + | 1509 | WP_003567670.1 | DEAD/DEAH box helicase | - |
| FO269_RS09235 () | 1758012..1758386 | + | 375 | WP_003567669.1 | holo-ACP synthase | - |
| FO269_RS09240 () | 1758373..1759509 | + | 1137 | WP_003581082.1 | alanine racemase | - |
| FO269_RS09245 () | 1759577..1759825 | + | 249 | WP_003567665.1 | antitoxin | Antitoxin Detail |
| FO269_RS09250 () | 1759845..1760228 | + | 384 | WP_003567661.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| FO269_RS09255 () | 1760412..1760933 | + | 522 | WP_003567657.1 | QueT transporter family protein | - |
| FO269_RS09265 () | 1761207..1765664 | + | 4458 | WP_003581075.1 | glutamate synthase large subunit | - |
| FO269_RS09275 () | 1765800..1767233 | + | 1434 | WP_003567654.1 | glutamate synthase subunit beta | - |
| FO269_RS09280 () | 1767362..1768066 | - | 705 | WP_003567652.1 | L,D-transpeptidase | - |
| FO269_RS09290 () | 1768342..1769007 | - | 666 | WP_003567650.1 | CBS domain-containing protein | - |
| FO269_RS09300 () | 1769509..1770879 | - | 1371 | WP_003571470.1 | peptidoglycan binding domain-containing protein | - |
| FO269_RS09310 () | 1771290..1772270 | - | 981 | WP_003567646.1 | L-lactate dehydrogenase | - |
| FO269_RS09315 () | 1772940..1773497 | + | 558 | WP_003567642.1 | aminoacyl-tRNA hydrolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|