MGE detailed information
MGE type: Prophage MGE length: 36863 bp
Accession: NZ_CP041614 Location: 2994165..3031027 Organism: Shewanella sp. YLB-06 Replicon: chromosome
Accession: NZ_CP041614 Location: 2994165..3031027 Organism: Shewanella sp. YLB-06 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FM037_RS13185 () | 2990222..2990905 | + | 684 | WP_144046386.1 | response regulator transcription factor | - |
| FM037_RS13190 () | 2991058..2992185 | + | 1128 | WP_144046387.1 | carboxypeptidase family protein | - |
| FM037_RS13195 () | 2992213..2992530 | + | 318 | WP_144046388.1 | zinc ribbon domain-containing protein | - |
| FM037_RS13200 () | 2992527..2992808 | + | 282 | WP_144046389.1 | DUF1315 family protein | - |
| FM037_RS13205 () | 2992963..2993976 | - | 1014 | WP_144046390.1 | asparaginase | - |
| FM037_RS13210 () | 2994165..2996006 | - | 1842 | WP_144048941.1 | signal peptide peptidase SppA | - |
| FM037_RS13215 () | 2996173..2998218 | + | 2046 | WP_144046391.1 | NADPH-dependent 2,4-dienoyl-CoA reductase | - |
| FM037_RS13220 () | 2998842..2999348 | + | 507 | WP_144046392.1 | hypothetical protein | - |
| FM037_RS13225 () | 2999384..2999860 | + | 477 | WP_144046393.1 | DUF2913 family protein | - |
| FM037_RS13230 () | 2999994..3000224 | + | 231 | WP_144046394.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| FM037_RS13235 () | 3000239..3000640 | + | 402 | WP_144048942.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| FM037_RS13240 () | 3000903..3002449 | - | 1547 | Protein_2564 | IS3 family transposase | - |
| FM037_RS13245 () | 3002691..3003724 | - | 1034 | Protein_2565 | tyrosine-type recombinase/integrase | - |
| FM037_RS13250 () | 3004107..3004442 | - | 336 | WP_185977024.1 | TolC family protein | - |
| FM037_RS13255 () | 3004455..3004901 | + | 447 | Protein_2567 | Hcp family type VI secretion system effector | - |
| FM037_RS13260 () | 3005210..3007258 | + | 2049 | WP_144046396.1 | type VI secretion system tip protein VgrG | - |
| FM037_RS13265 () | 3007268..3008644 | + | 1377 | WP_144046397.1 | PAAR domain-containing protein | - |
| FM037_RS13270 () | 3008725..3009429 | + | 705 | WP_144046398.1 | hypothetical protein | - |
| FM037_RS13275 () | 3009458..3010150 | + | 693 | WP_144046399.1 | hypothetical protein | - |
| FM037_RS13280 () | 3010914..3012896 | + | 1983 | WP_144046400.1 | hypothetical protein | - |
| FM037_RS13285 () | 3012923..3013678 | + | 756 | WP_144046401.1 | hypothetical protein | - |
| FM037_RS13290 () | 3013923..3014462 | + | 540 | WP_144046402.1 | hypothetical protein | - |
| FM037_RS13295 () | 3014820..3015020 | - | 201 | WP_144046403.1 | hypothetical protein | - |
| FM037_RS13300 () | 3015272..3015819 | + | 548 | Protein_2576 | EAL domain-containing protein | - |
| FM037_RS13305 () | 3015806..3016519 | - | 714 | WP_144046404.1 | response regulator transcription factor | - |
| FM037_RS13310 () | 3016889..3017623 | + | 735 | WP_185977025.1 | IS6 family transposase | - |
| FM037_RS13315 () | 3017795..3018484 | - | 690 | WP_144048943.1 | autoinducer binding domain-containing protein | - |
| FM037_RS13320 () | 3018779..3018991 | + | 213 | Protein_2580 | DDE-type integrase/transposase/recombinase | - |
| FM037_RS13325 () | 3019286..3020242 | - | 957 | WP_144048944.1 | LysR family transcriptional regulator | - |
| FM037_RS13330 () | 3020554..3020847 | + | 294 | WP_144046406.1 | helix-turn-helix domain-containing protein | - |
| FM037_RS13335 () | 3021084..3021647 | + | 564 | WP_144046407.1 | hypothetical protein | - |
| FM037_RS13340 () | 3021641..3024220 | + | 2580 | WP_144046408.1 | Ig-like domain-containing protein | - |
| FM037_RS13345 () | 3024180..3024602 | - | 423 | WP_144046409.1 | hypothetical protein | - |
| FM037_RS13350 () | 3024717..3025172 | - | 456 | WP_144046410.1 | IS6 family transposase | - |
| FM037_RS13355 () | 3025439..3026311 | - | 873 | WP_144046411.1 | AraC family transcriptional regulator | - |
| FM037_RS13360 () | 3026427..3028238 | + | 1812 | WP_144046412.1 | methyl-accepting chemotaxis protein | - |
| FM037_RS13365 () | 3028262..3029743 | + | 1482 | WP_144046413.1 | EAL domain-containing protein | - |
| FM037_RS13370 () | 3030030..3030736 | + | 707 | WP_144046414.1 | IS6 family transposase | - |
| FM037_RS13375 () | 3030873..3031287 | - | 415 | Protein_2591 | helix-turn-helix domain-containing protein | - |
| FM037_RS13380 () | 3031299..3031490 | - | 192 | WP_144046415.1 | type II toxin-antitoxin system HigB family toxin | - |
| FM037_RS13385 () | 3031478..3031741 | - | 264 | WP_144046416.1 | hypothetical protein | - |
| FM037_RS13390 () | 3031763..3032026 | - | 264 | WP_144046417.1 | hypothetical protein | - |
| FM037_RS13395 () | 3032337..3032531 | + | 195 | WP_144046418.1 | hypothetical protein | - |
| FM037_RS13400 () | 3032643..3032843 | - | 201 | WP_144046419.1 | hypothetical protein | - |
| FM037_RS13405 () | 3032879..3033148 | - | 270 | WP_144046420.1 | hypothetical protein | - |
| FM037_RS13410 () | 3033150..3033734 | - | 585 | WP_144048945.1 | DUF2913 family protein | - |
| FM037_RS13415 () | 3034546..3034932 | - | 387 | WP_144046421.1 | H-NS histone family protein | - |
| FM037_RS13420 () | 3035240..3035493 | + | 254 | Protein_2600 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| FM037_RS13425 () | 3035483..3035766 | + | 284 | Protein_2601 | type II toxin-antitoxin system RelE/ParE family toxin | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|