MGE detailed information
MGE type: Genomic_island MGE length: 21228 bp
Accession: NZ_CP040570 Location: 4720920..4742147 Organism: Escherichia coli O157:H7 strain ECP17-1298 Replicon: chromosome
Accession: NZ_CP040570 Location: 4720920..4742147 Organism: Escherichia coli O157:H7 strain ECP17-1298 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FGA23_RS24335 () | 4716646..4717188 | + | 543 | WP_000934391.1 | hypothetical protein | - |
| FGA23_RS24340 () | 4717481..4719631 | + | 2151 | WP_001298933.1 | pyruvate/proton symporter BtsT | - |
| FGA23_RS24345 () | 4719681..4719884 | + | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| FGA23_RS24350 () | 4719895..4720851 | + | 957 | WP_001297640.1 | GTPase | - |
| FGA23_RS24355 () | 4720920..4722278 | - | 1359 | WP_001304004.1 | DUF262 domain-containing protein | - |
| FGA23_RS24360 () | 4722287..4722571 | - | 285 | WP_001304005.1 | DUF262 domain-containing protein | - |
| FGA23_RS24365 () | 4722849..4725281 | + | 2433 | WP_000819018.1 | DEAD/DEAH box helicase family protein | - |
| FGA23_RS24370 () | 4725348..4726817 | + | 1470 | WP_001302468.1 | type I restriction-modification system subunit M | - |
| FGA23_RS24375 () | 4726817..4728571 | + | 1755 | WP_000110082.1 | restriction endonuclease subunit S | - |
| - () | 4728721..4728797 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4728721..4728797 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4728721..4728797 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4728721..4728797 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4728721..4728797 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 4728721..4728797 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 4728721..4728797 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 4728721..4728797 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| FGA23_RS24380 () | 4728792..4729133 | + | 342 | WP_000132630.1 | endoribonuclease SymE | Toxin Detail |
| FGA23_RS24385 () | 4729180..4730343 | - | 1164 | WP_001304006.1 | DUF1524 domain-containing protein | - |
| FGA23_RS24390 () | 4730391..4731272 | - | 882 | WP_001304007.1 | DUF262 domain-containing protein | - |
| FGA23_RS24395 () | 4731369..4731533 | - | 165 | WP_000394274.1 | DUF1127 domain-containing protein | - |
| FGA23_RS24400 () | 4731710..4733122 | + | 1413 | WP_000199295.1 | PLP-dependent aminotransferase family protein | - |
| FGA23_RS28430 () | 4733365..4733565 | - | 201 | WP_001310455.1 | hypothetical protein | - |
| FGA23_RS24405 () | 4733570..4734322 | - | 753 | Protein_4650 | hypothetical protein | VF |
| FGA23_RS24410 () | 4734789..4736021 | + | 1233 | WP_001136983.1 | multidrug efflux MFS transporter MdtM | - |
| FGA23_RS24415 () | 4736062..4737333 | + | 1272 | WP_001037406.1 | DUF445 domain-containing protein | - |
| FGA23_RS24420 () | 4737449..4738600 | + | 1152 | WP_001302771.1 | 2-hydroxyacyl-CoA dehydratase subunit D | - |
| FGA23_RS24425 () | 4738610..4739377 | + | 768 | WP_000222489.1 | hypothetical protein | - |
| FGA23_RS24430 () | 4739374..4739640 | + | 267 | WP_000657677.1 | DUF3343 domain-containing protein | - |
| FGA23_RS24435 () | 4739952..4742147 | + | 2196 | WP_000535069.1 | hypothetical protein | VF |
| FGA23_RS24445 () | 4742413..4743255 | + | 843 | WP_000746206.1 | YjiK family protein | - |
| FGA23_RS24450 () | 4743323..4744501 | + | 1179 | WP_001089435.1 | MFS transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | NC_002655 | 5456776..5475497 | 0.003 | |||
| Escherichia coli O157:H7 str. Sakai | NC_002695 | 5426911..5445631 | 0.003 |