MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 93897 bp
Accession: NZ_CP039855 Location: 1..93897 Organism: Salmonella enterica subsp. enterica serovar 14[5]12:i:- strain PNCS014864 Replicon: plasmid PNCS014864 strain 14[5]12:i:-
Accession: NZ_CP039855 Location: 1..93897 Organism: Salmonella enterica subsp. enterica serovar 14[5]12:i:- strain PNCS014864 Replicon: plasmid PNCS014864 strain 14[5]12:i:-
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E5O08_RS23510 () | 1..741 | + | 741 | WP_001230719.1 | type-F conjugative transfer system secretin TraK | - |
| E5O08_RS23515 () | 741..2162 | + | 1422 | WP_000146700.1 | conjugal transfer protein TraB | - |
| E5O08_RS23520 () | 2152..2748 | + | 597 | WP_000527896.1 | conjugal transfer protein TraP | - |
| E5O08_RS23525 () | 2726..2971 | + | 246 | WP_010999944.1 | DUF2689 domain-containing protein | - |
| E5O08_RS23530 () | 2968..3483 | + | 516 | WP_001079995.1 | type IV conjugative transfer system lipoprotein TraV | - |
| E5O08_RS23535 () | 3618..3839 | + | 222 | WP_001278699.1 | conjugal transfer protein TraR | - |
| E5O08_RS23540 () | 3832..4299 | + | 468 | WP_000549562.1 | hypothetical protein | - |
| E5O08_RS23545 () | 4416..4679 | + | 264 | WP_001239256.1 | hypothetical protein | - |
| E5O08_RS23550 () | 4695..7343 | + | 2649 | WP_000793310.1 | type IV secretion system protein TraC | - |
| E5O08_RS23555 () | 7318..7704 | + | 387 | WP_000105164.1 | type-F conjugative transfer system protein TrbI | - |
| E5O08_RS23560 () | 7701..8333 | + | 633 | WP_000871995.1 | type-F conjugative transfer system protein TraW | - |
| E5O08_RS23565 () | 8330..9322 | + | 993 | WP_000833320.1 | conjugal transfer pilus assembly protein TraU | - |
| E5O08_RS23570 () | 9341..9649 | + | 309 | WP_010999945.1 | hypothetical protein | - |
| E5O08_RS23575 () | 9634..10272 | + | 639 | WP_000554823.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| E5O08_RS23580 () | 10309..10728 | + | 420 | WP_001229397.1 | HNH endonuclease | - |
| E5O08_RS23585 () | 10725..12551 | + | 1827 | WP_000827528.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| E5O08_RS23590 () | 12562..12777 | + | 216 | WP_000700023.1 | conjugal transfer protein TrbE | - |
| E5O08_RS23595 () | 12789..13538 | + | 750 | WP_001226854.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| E5O08_RS23600 () | 13752..14045 | + | 294 | WP_001233881.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| E5O08_RS23605 () | 14032..14580 | + | 549 | WP_000055840.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| E5O08_RS23610 () | 14570..15952 | + | 1383 | WP_001161719.1 | conjugal transfer protein TraH | - |
| E5O08_RS23615 () | 15949..18771 | + | 2823 | WP_001007086.1 | conjugal transfer mating pair stabilization protein TraG | - |
| E5O08_RS23620 () | 18787..19281 | + | 495 | WP_010999946.1 | entry exclusion protein | - |
| E5O08_RS23625 () | 19317..20048 | + | 732 | WP_000782438.1 | complement resistance protein TraT | - |
| E5O08_RS23630 () | 20425..22659 | + | 2235 | WP_000009319.1 | type IV conjugative transfer system coupling protein TraD | - |
| E5O08_RS23635 () | 22668..23066 | - | 399 | WP_000911322.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| E5O08_RS23640 () | 23066..23296 | - | 231 | WP_001526804.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| E5O08_RS23645 () | 23375..28633 | + | 5259 | WP_000986921.1 | conjugative transfer relaxase/helicase TraI | - |
| E5O08_RS23650 () | 28653..29393 | + | 741 | WP_000177629.1 | conjugal transfer pilus acetylase TraX | - |
| E5O08_RS23655 () | 29448..30011 | + | 564 | WP_000139307.1 | fertility inhibition protein FinO | - |
| E5O08_RS23660 () | 30126..30410 | + | 285 | WP_000477658.1 | hypothetical protein | - |
| E5O08_RS23665 () | 30423..30578 | + | 156 | WP_000983042.1 | hypothetical protein | - |
| E5O08_RS23670 () | 30744..31186 | + | 443 | Protein_33 | phospholipase | - |
| E5O08_RS23680 () | 31365..31631 | + | 267 | WP_010999936.1 | replication regulatory protein RepA | - |
| E5O08_RS23685 () | 31881..31958 | + | 78 | WP_001541552.1 | RepA leader peptide Tap | - |
| E5O08_RS23690 () | 31939..32820 | + | 882 | WP_001738692.1 | incFII family plasmid replication initiator RepA | - |
| E5O08_RS23700 () | 33680..33901 | + | 222 | WP_071533052.1 | SdiA-regulated domain-containing protein | - |
| E5O08_RS23705 () | 33998..34756 | - | 759 | WP_000417898.1 | AraC family transcriptional regulator | - |
| E5O08_RS23710 () | 35023..35580 | - | 558 | WP_000725062.1 | complement resistance protein Rck | - |
| E5O08_RS23715 () | 35670..36569 | - | 900 | WP_010999938.1 | YjiK family protein | - |
| E5O08_RS23725 () | 36702..37355 | - | 654 | WP_000178592.1 | DsbA family protein | - |
| E5O08_RS23730 () | 37600..37950 | - | 351 | WP_001526811.1 | helix-turn-helix transcriptional regulator | - |
| E5O08_RS23735 () | 37935..38147 | - | 213 | WP_000004313.1 | transcriptional regulator PefI | - |
| E5O08_RS23740 () | 38579..39454 | - | 876 | WP_014343944.1 | hypothetical protein | - |
| E5O08_RS23745 () | 39707..40264 | - | 558 | WP_010999940.1 | membrane protein | - |
| E5O08_RS23750 () | 40279..40971 | - | 693 | WP_001038510.1 | fimbrial chaperone PefD | - |
| E5O08_RS23755 () | 40964..43372 | - | 2409 | WP_000007893.1 | outer membrane usher protein PefC | - |
| E5O08_RS23760 () | 43600..44118 | - | 519 | WP_000748205.1 | major pilin PefA | - |
| E5O08_RS23765 () | 44393..44695 | - | 303 | WP_000979451.1 | transcriptional regulator PefB | - |
| E5O08_RS23775 () | 45414..45795 | + | 382 | Protein_50 | NirD/YgiW/YdeI family stress tolerance protein | - |
| E5O08_RS23780 () | 46072..46408 | + | 337 | Protein_51 | site-specific integrase | - |
| E5O08_RS23785 () | 46667..47656 | - | 990 | WP_001527061.1 | RepB family plasmid replication initiator protein | - |
| E5O08_RS23790 () | 48150..48446 | - | 297 | WP_001687482.1 | hypothetical protein | - |
| E5O08_RS23800 () | 48930..49451 | - | 522 | WP_010999942.1 | hypothetical protein | - |
| E5O08_RS23805 () | 50127..50345 | + | 219 | WP_000813641.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| E5O08_RS23810 () | 50347..50652 | + | 306 | WP_001159863.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| E5O08_RS23815 () | 50654..50944 | + | 291 | WP_001266176.1 | hypothetical protein | - |
| E5O08_RS23820 () | 50941..51462 | + | 522 | WP_000198608.1 | hypothetical protein | - |
| E5O08_RS23825 () | 51497..52279 | + | 783 | WP_000082169.1 | site-specific integrase | - |
| E5O08_RS23830 () | 52288..53001 | + | 714 | Protein_60 | EAL domain-containing protein | - |
| E5O08_RS23840 () | 53005..53514 | + | 510 | WP_001541544.1 | CaiF/GrlA family transcriptional regulator | - |
| E5O08_RS23845 () | 53508..53993 | + | 486 | WP_000905606.1 | membrane protein | - |
| E5O08_RS23850 () | 54270..54557 | - | 288 | WP_071530243.1 | hypothetical protein | - |
| E5O08_RS23855 () | 54713..55273 | + | 561 | WP_000900095.1 | inverse autotransporter beta domain-containing protein | - |
| E5O08_RS23860 () | 55340..55690 | - | 351 | WP_001541541.1 | helix-turn-helix domain-containing protein | - |
| E5O08_RS23865 () | 55747..56171 | + | 425 | Protein_66 | IS200/IS605 family transposase | - |
| E5O08_RS23870 () | 56298..56948 | - | 651 | WP_001575489.1 | SPI-2 type III secretion system effector cysteine hydrolase SpvD | - |
| E5O08_RS23875 () | 57209..57934 | - | 726 | WP_001122242.1 | type III secretion system effector phosphothreonine lyase SpvC | - |
| E5O08_RS23880 () | 58215..59990 | - | 1776 | WP_001676648.1 | SPI-2 type III secretion system effector NAD(+)--protein-arginine ADP-ribosyltransferase SpvB | - |
| E5O08_RS23885 () | 60172..60939 | - | 768 | WP_023892969.1 | virulence protein SpvA | - |
| E5O08_RS23890 () | 61113..61277 | - | 165 | WP_001576629.1 | glycoside hydrolase family protein | - |
| E5O08_RS23895 () | 61451..62344 | - | 894 | WP_000346691.1 | virulence genes transcriptional activator SpvR | - |
| E5O08_RS23900 () | 62952..63989 | + | 1038 | WP_001121399.1 | IS630 family transposase | - |
| E5O08_RS23905 () | 64178..65203 | - | 1026 | WP_001576625.1 | ExeA family protein | - |
| E5O08_RS23910 () | 65136..66800 | - | 1665 | WP_000098783.1 | IS481 family transposase | - |
| E5O08_RS23915 () | 66784..67344 | - | 561 | WP_001240331.1 | recombinase family protein | - |
| E5O08_RS23920 () | 67551..68291 | - | 741 | WP_001541566.1 | carbonic anhydrase | - |
| E5O08_RS23930 () | 68946..69434 | - | 489 | WP_001135407.1 | hypothetical protein | - |
| E5O08_RS23935 () | 69693..70808 | + | 1116 | WP_001247118.1 | DNA-binding protein | - |
| E5O08_RS23940 () | 70894..71310 | + | 417 | WP_001541564.1 | hypothetical protein | - |
| E5O08_RS23945 () | 71494..71829 | + | 336 | WP_001527010.1 | hypothetical protein | - |
| E5O08_RS23950 () | 71886..72452 | + | 567 | WP_001541562.1 | DUF2913 family protein | - |
| E5O08_RS23955 () | 72484..73425 | - | 942 | WP_000728917.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| E5O08_RS23960 () | 73840..75045 | + | 1206 | WP_000427676.1 | AAA family ATPase | - |
| E5O08_RS23965 () | 75045..76019 | + | 975 | WP_000064274.1 | ParB/RepB/Spo0J family partition protein | - |
| E5O08_RS23970 () | 76101..77375 | - | 1275 | WP_000457541.1 | Y-family DNA polymerase | - |
| E5O08_RS23975 () | 77375..77797 | - | 423 | WP_000925627.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| E5O08_RS23980 () | 78308..78778 | + | 471 | WP_000490265.1 | hypothetical protein | - |
| E5O08_RS23985 () | 78771..79127 | + | 357 | WP_000369839.1 | hypothetical protein | - |
| E5O08_RS23995 () | 79509..80189 | + | 681 | WP_000088645.1 | DNA methylase | - |
| E5O08_RS24000 () | 80189..80410 | + | 222 | WP_001109588.1 | hypothetical protein | - |
| E5O08_RS24005 () | 80466..80879 | + | 414 | WP_000990114.1 | DUF1380 family protein | - |
| E5O08_RS24010 () | 80951..81715 | + | 765 | WP_001246548.1 | membrane protein | - |
| E5O08_RS24020 () | 82154..82645 | + | 492 | WP_149143712.1 | antirestriction protein | - |
| E5O08_RS24025 () | 82712..83146 | + | 435 | WP_000274533.1 | DUF1380 family protein | - |
| E5O08_RS24030 () | 83382..83705 | + | 324 | WP_000015983.1 | DNA polymerase III subunit theta | - |
| E5O08_RS24040 () | 84400..84918 | + | 519 | WP_000741240.1 | single-stranded DNA-binding protein SSB2 | - |
| E5O08_RS24045 () | 84973..85215 | + | 243 | WP_000131520.1 | DUF905 domain-containing protein | - |
| E5O08_RS24050 () | 85284..87281 | + | 1998 | WP_000117513.1 | ParB/RepB/Spo0J family partition protein | - |
| E5O08_RS24055 () | 87321..87755 | + | 435 | WP_010999943.1 | conjugation system SOS inhibitor PsiB | - |
| E5O08_RS24060 () | 87752..88489 | + | 738 | WP_000581933.1 | plasmid SOS inhibition protein A | - |
| E5O08_RS24065 () | 88999..89400 | + | 402 | Protein_102 | DUF945 domain-containing protein | - |
| E5O08_RS24070 () | 89462..89817 | + | 356 | Protein_103 | DUF945 domain-containing protein | - |
| E5O08_RS24075 () | 90128..90598 | - | 471 | WP_001526856.1 | transglycosylase SLT domain-containing protein | - |
| E5O08_RS24085 () | 91013..91393 | + | 381 | WP_001151546.1 | relaxosome protein TraM | - |
| E5O08_RS24090 () | 91586..92272 | + | 687 | WP_000336297.1 | PAS domain-containing protein | - |
| E5O08_RS24095 () | 92366..92593 | + | 228 | WP_001676655.1 | conjugal transfer relaxosome protein TraY | - |
| E5O08_RS24100 () | 92635..92997 | + | 363 | WP_001274201.1 | type IV conjugative transfer system pilin TraA | - |
| E5O08_RS24105 () | 93012..93323 | + | 312 | WP_000012129.1 | type IV conjugative transfer system protein TraL | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|