MGE detailed information
MGE type: Prophage MGE length: 81270 bp
Accession: NZ_CP039837 Location: 4333331..4414600 Organism: Escherichia coli O157:H7 strain USDA5905 Replicon: chromosome
Accession: NZ_CP039837 Location: 4333331..4414600 Organism: Escherichia coli O157:H7 strain USDA5905 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E3175_RS21390 () | 4329623..4330579 | + | 957 | WP_000121361.1 | molybdenum cofactor insertion chaperone PaoD | - |
| E3175_RS21395 () | 4330758..4331885 | - | 1128 | WP_000171068.1 | MFS transporter | - |
| E3175_RS21400 () | 4332027..4333085 | - | 1059 | WP_001303808.1 | alpha/beta hydrolase | - |
| E3175_RS21405 () | 4333331..4334233 | + | 903 | WP_013009125.1 | HTH-type transcriptional regulator PgrR | VF |
| E3175_RS21410 () | 4334936..4335214 | - | 279 | WP_001301751.1 | hypothetical protein | - |
| E3175_RS21415 () | 4335380..4336102 | - | 723 | WP_000361969.1 | putative oxidoreductase | VF |
| E3175_RS21420 () | 4336201..4337100 | + | 900 | WP_000687183.1 | HTH-type transcriptional regulator PgrR | VF |
| E3175_RS21425 () | 4337775..4338730 | + | 956 | Protein_4197 | hypothetical protein | - |
| E3175_RS21430 () | 4338863..4341196 | - | 2334 | WP_000016222.1 | toprim domain-containing protein | - |
| E3175_RS21435 () | 4341210..4341533 | - | 324 | WP_000562750.1 | DUF5375 family protein | - |
| E3175_RS21440 () | 4341533..4341754 | - | 222 | WP_001071227.1 | hypothetical protein | - |
| E3175_RS21445 () | 4341751..4342308 | - | 558 | WP_000973390.1 | host cell division inhibitor Icd-like protein | - |
| E3175_RS21450 () | 4342305..4342565 | - | 261 | WP_001244581.1 | AlpA family transcriptional regulator | - |
| E3175_RS21455 () | 4343484..4344236 | + | 753 | WP_000154958.1 | septation initiation protein | - |
| E3175_RS21460 () | 4344233..4344784 | + | 552 | WP_000968317.1 | Polarity suppression protein | - |
| E3175_RS21465 () | 4344790..4345062 | + | 273 | WP_001185340.1 | ogr/Delta-like zinc finger family protein | - |
| E3175_RS21470 () | 4345472..4346038 | - | 567 | WP_000350115.1 | hypothetical protein | - |
| E3175_RS21475 () | 4346106..4347290 | - | 1185 | WP_001359621.1 | hypothetical protein | - |
| E3175_RS21480 () | 4347283..4347741 | - | 459 | WP_000251689.1 | hypothetical protein | - |
| E3175_RS21485 () | 4347741..4348358 | - | 618 | WP_001303996.1 | hypothetical protein | - |
| E3175_RS21490 () | 4348331..4348747 | - | 417 | WP_024174675.1 | hypothetical protein | - |
| E3175_RS21495 () | 4348751..4349932 | - | 1182 | WP_001130501.1 | Prophage integrase IntS ; Integrase | Integrase |
| E3175_RS21500 () | 4350563..4351924 | + | 1362 | Protein_4212 | hypothetical protein | VF |
| E3175_RS21505 () | 4352341..4353321 | - | 981 | WP_000950786.1 | hypothetical protein | VF |
| E3175_RS21510 () | 4353492..4353632 | + | 141 | Protein_4214 | site-specific integrase | - |
| E3175_RS21515 () | 4353945..4354089 | - | 145 | Protein_4215 | tail fiber assembly protein | - |
| E3175_RS21520 () | 4354321..4354911 | - | 591 | WP_001132164.1 | hypothetical protein | VF |
| E3175_RS21525 () | 4355094..4355720 | + | 627 | WP_001144082.1 | hypothetical protein | VF |
| E3175_RS21530 () | 4355823..4356445 | + | 623 | Protein_4218 | hypothetical protein | VF |
| E3175_RS21535 () | 4356461..4357033 | - | 573 | WP_001117988.1 | hypothetical protein | VF |
| E3175_RS21540 () | 4357145..4357414 | - | 270 | WP_001024023.1 | phage tail fiber C-terminal domain-containing protein | - |
| E3175_RS21545 () | 4357416..4358732 | - | 1317 | WP_000741872.1 | ISNCY family transposase KIS | Transposase |
| E3175_RS21550 () | 4358792..4359391 | - | 600 | WP_001233141.1 | Outer membrane protein X | VF |
| E3175_RS21555 () | 4359462..4362874 | - | 3413 | Protein_4223 | host specificity protein J | - |
| E3175_RS21560 () | 4362935..4363537 | - | 603 | WP_000090854.1 | tail assembly protein | - |
| E3175_RS21565 () | 4363474..4364217 | - | 744 | WP_000140754.1 | C40 family peptidase | - |
| E3175_RS21570 () | 4364223..4364921 | - | 699 | WP_001152567.1 | phage minor tail protein L | - |
| E3175_RS21575 () | 4364921..4365250 | - | 330 | WP_000847379.1 | phage tail protein | - |
| E3175_RS21580 () | 4365247..4367826 | - | 2580 | WP_100089164.1 | phage tail tape measure protein | - |
| E3175_RS21585 () | 4367819..4368253 | - | 435 | WP_000459456.1 | phage tail assembly protein T | - |
| E3175_RS21590 () | 4368235..4368657 | - | 423 | WP_000479189.1 | phage minor tail protein G | - |
| E3175_RS21595 () | 4368673..4369413 | - | 741 | WP_001419284.1 | phage tail protein | - |
| E3175_RS21600 () | 4369421..4369816 | - | 396 | WP_000683050.1 | phage minor tail U family protein | - |
| E3175_RS21605 () | 4369813..4370346 | - | 534 | WP_000155463.1 | phage tail protein | - |
| E3175_RS21610 () | 4370358..4370711 | - | 354 | WP_001204539.1 | tail attachment protein | - |
| E3175_RS21615 () | 4370704..4371078 | - | 375 | WP_000201530.1 | hypothetical protein | - |
| E3175_RS21620 () | 4371130..4372158 | - | 1029 | WP_000522651.1 | major capsid protein | - |
| E3175_RS21625 () | 4372216..4372563 | - | 348 | WP_000256821.1 | head decoration protein | - |
| E3175_RS21630 () | 4372600..4374105 | - | 1506 | WP_100089185.1 | S49 family peptidase | - |
| E3175_RS21635 () | 4374095..4375687 | - | 1593 | WP_174846757.1 | phage portal protein | - |
| E3175_RS21640 () | 4375684..4375890 | - | 207 | WP_000259002.1 | head-tail joining protein | - |
| E3175_RS21645 () | 4375874..4377802 | - | 1929 | WP_174846758.1 | phage terminase large subunit family protein | - |
| E3175_RS21650 () | 4377774..4378283 | - | 510 | WP_000235440.1 | terminase small subunit | - |
| E3175_RS21655 () | 4378685..4378909 | + | 225 | WP_013009113.1 | YlcI/YnfO family protein | - |
| E3175_RS21660 () | 4378990..4379304 | - | 315 | WP_001302717.1 | PerC family transcriptional regulator | - |
| E3175_RS21665 () | 4379831..4380013 | - | 183 | WP_072020783.1 | prophage lysis lipoprotein RzoD | - |
| E3175_RS21670 () | 4380230..4380727 | - | 498 | WP_000075132.1 | lysozyme RrrD | - |
| E3175_RS21675 () | 4380727..4380942 | - | 216 | WP_024164617.1 | class II holin family protein | - |
| E3175_RS21680 () | 4381380..4383221 | - | 1842 | WP_000026511.1 | DUF1737 domain-containing protein | - |
| E3175_RS21685 () | 4383518..4383649 | - | 132 | WP_001419325.1 | DUF3927 family protein | - |
| E3175_RS21700 () | 4384151..4384669 | - | 519 | WP_000512794.1 | DUF1133 family protein | - |
| E3175_RS21705 () | 4384660..4385331 | - | 672 | WP_001028867.1 | serine/threonine protein phosphatase | - |
| E3175_RS21710 () | 4385328..4385933 | - | 606 | WP_001107957.1 | recombination protein NinG | - |
| E3175_RS21715 () | 4385926..4386096 | - | 171 | WP_000566862.1 | protein ninF | - |
| E3175_RS21720 () | 4386093..4386275 | - | 183 | WP_001254239.1 | NinE family protein | - |
| E3175_RS21725 () | 4386272..4386799 | - | 528 | WP_000153282.1 | phage N-6-adenine-methyltransferase | - |
| E3175_RS21730 () | 4386796..4387236 | - | 441 | WP_141079606.1 | recombination protein NinB | - |
| E3175_RS21735 () | 4387310..4387600 | - | 291 | WP_000145894.1 | protein ren | - |
| E3175_RS21740 () | 4387597..4388298 | - | 702 | WP_000788868.1 | Replication protein P | - |
| E3175_RS21745 () | 4388295..4389194 | - | 900 | WP_000185433.1 | replication protein | - |
| E3175_RS21750 () | 4389227..4389520 | - | 294 | WP_000251069.1 | lambda phage CII family protein | - |
| E3175_RS21755 () | 4389640..4389855 | - | 216 | WP_001194218.1 | helix-turn-helix domain-containing protein | - |
| E3175_RS21760 () | 4389959..4390591 | + | 633 | WP_000028392.1 | LexA family transcriptional regulator | - |
| E3175_RS21765 () | 4390588..4390992 | + | 405 | WP_000618044.1 | hypothetical protein | - |
| E3175_RS21770 () | 4391211..4391403 | + | 193 | Protein_4264 | antitermination protein | - |
| E3175_RS21775 () | 4391668..4392150 | - | 483 | WP_000281856.1 | superinfection exclusion B family protein | - |
| E3175_RS21780 () | 4392417..4392617 | + | 201 | WP_000213973.1 | antirestriction Ral family protein | - |
| E3175_RS21785 () | 4392841..4393005 | + | 165 | WP_001198861.1 | protease FtsH-inhibitory lysogeny factor CIII | - |
| E3175_RS21790 () | 4392974..4393117 | + | 144 | WP_000372937.1 | host cell division inhibitory peptide Kil | - |
| E3175_RS21795 () | 4393191..4393487 | + | 297 | WP_000995449.1 | host-nuclease inhibitor protein Gam | - |
| E3175_RS21800 () | 4393493..4394278 | + | 786 | WP_001418384.1 | phage recombination protein Bet | - |
| E3175_RS21805 () | 4394275..4394955 | + | 681 | WP_000186844.1 | YqaJ viral recombinase family protein | - |
| E3175_RS21810 () | 4394952..4395134 | + | 183 | WP_000682316.1 | DUF1317 domain-containing protein | - |
| E3175_RS21815 () | 4395107..4395298 | + | 192 | WP_000548536.1 | DUF1382 family protein | - |
| E3175_RS21820 () | 4395309..4395590 | + | 282 | WP_001386642.1 | cell division protein ZapA | - |
| E3175_RS21825 () | 4395689..4395910 | + | 222 | WP_000763359.1 | TraR/DksA family transcriptional regulator | - |
| E3175_RS21830 () | 4395907..4396413 | + | 507 | WP_001289865.1 | ead/Ea22-like family protein | - |
| E3175_RS21835 () | 4396410..4397174 | + | 765 | WP_000103020.1 | DUF550 domain-containing protein | - |
| E3175_RS21840 () | 4397275..4397619 | + | 345 | WP_001281200.1 | hypothetical protein | - |
| E3175_RS21845 () | 4397709..4398041 | + | 333 | Protein_4279 | helix-turn-helix domain-containing protein | - |
| E3175_RS21850 () | 4397933..4399093 | + | 1161 | WP_000023577.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| E3175_RS21860 () | 4399298..4400551 | - | 1254 | WP_000893281.1 | glutamate-5-semialdehyde dehydrogenase | - |
| E3175_RS21865 () | 4400563..4401666 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| E3175_RS21870 () | 4401954..4403009 | + | 1056 | WP_000749881.1 | phosphoporin PhoE | - |
| E3175_RS21875 () | 4403048..4403449 | - | 402 | WP_000174701.1 | sigma factor-binding protein Crl | - |
| E3175_RS21880 () | 4403507..4404751 | - | 1245 | WP_000189554.1 | esterase FrsA | - |
| - () | 4404167..4404247 | - | 81 | NuclAT_10 | - | - |
| - () | 4404167..4404247 | - | 81 | NuclAT_10 | - | - |
| - () | 4404167..4404247 | - | 81 | NuclAT_10 | - | - |
| - () | 4404167..4404247 | - | 81 | NuclAT_10 | - | - |
| E3175_RS21885 () | 4404843..4405301 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| E3175_RS21890 () | 4405562..4407019 | + | 1458 | WP_001293009.1 | cytosol nonspecific dipeptidase | - |
| E3175_RS21895 () | 4407076..4407633 | - | 558 | WP_023438539.1 | peptide chain release factor H | - |
| E3175_RS21900 () | 4407545..4407811 | - | 267 | WP_001303804.1 | hypothetical protein | - |
| E3175_RS21905 () | 4408118..4408570 | - | 453 | WP_001059871.1 | GNAT family N-acetyltransferase | - |
| E3175_RS21910 () | 4408580..4408978 | - | 399 | WP_001263495.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| E3175_RS21915 () | 4408981..4409274 | - | 294 | WP_000554757.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| E3175_RS21920 () | 4409326..4410381 | - | 1056 | WP_001226186.1 | DNA polymerase IV | - |
| E3175_RS21925 () | 4410452..4411237 | - | 786 | WP_000207556.1 | Chemotaxis protein LafU | VF |
| E3175_RS21930 () | 4411182..4412921 | + | 1740 | WP_001301901.1 | Flagellar biosynthesis protein FlhA | VF |
| E3175_RS21935 () | 4413154..4413651 | - | 498 | Protein_4296 | REP-associated tyrosine transposase RayT | - |
| E3175_RS21940 () | 4413827..4414600 | - | 774 | WP_000543891.1 | Murein DD-endopeptidase MepH | VF |
| E3175_RS21945 () | 4414786..4415046 | + | 261 | WP_000729705.1 | type II toxin-antitoxin system antitoxin DinJ | - |
| E3175_RS21950 () | 4415049..4415327 | + | 279 | WP_000615979.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | - |
| E3175_RS21955 () | 4415483..4416223 | + | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
| E3175_RS21960 () | 4416194..4416961 | - | 768 | WP_001301698.1 | class II glutamine amidotransferase | - |
| E3175_RS21965 () | 4417066..4417644 | - | 579 | WP_000284050.1 | D-sedoheptulose 7-phosphate isomerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|