MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 93838 bp
Accession: NZ_CP039718 Location: 1..93838 Organism: Salmonella enterica subsp. enterica serovar 14[5]12:i:- strain PNCS000211 Replicon: plasmid PNCS000211 strain 14[5]12:i:-
Accession: NZ_CP039718 Location: 1..93838 Organism: Salmonella enterica subsp. enterica serovar 14[5]12:i:- strain PNCS000211 Replicon: plasmid PNCS000211 strain 14[5]12:i:-
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E5N97_RS24845 () | 1..741 | + | 741 | WP_001230719.1 | type-F conjugative transfer system secretin TraK | - |
| E5N97_RS24850 () | 741..2162 | + | 1422 | WP_000146700.1 | conjugal transfer protein TraB | - |
| E5N97_RS24855 () | 2152..2748 | + | 597 | WP_000527896.1 | conjugal transfer protein TraP | - |
| E5N97_RS24860 () | 2726..2971 | + | 246 | WP_010999944.1 | DUF2689 domain-containing protein | - |
| E5N97_RS24865 () | 2968..3483 | + | 516 | WP_001079995.1 | type IV conjugative transfer system lipoprotein TraV | - |
| E5N97_RS24870 () | 3618..3839 | + | 222 | WP_001278699.1 | conjugal transfer protein TraR | - |
| E5N97_RS24875 () | 3832..4299 | + | 468 | WP_000549562.1 | hypothetical protein | - |
| E5N97_RS24880 () | 4416..4679 | + | 264 | WP_001239255.1 | hypothetical protein | - |
| E5N97_RS24885 () | 4695..7343 | + | 2649 | WP_000793310.1 | type IV secretion system protein TraC | - |
| E5N97_RS24890 () | 7318..7704 | + | 387 | WP_000105164.1 | type-F conjugative transfer system protein TrbI | - |
| E5N97_RS24895 () | 7701..8333 | + | 633 | WP_000871995.1 | type-F conjugative transfer system protein TraW | - |
| E5N97_RS24900 () | 8330..9322 | + | 993 | WP_000833320.1 | conjugal transfer pilus assembly protein TraU | - |
| E5N97_RS24905 () | 9341..9649 | + | 309 | WP_010999945.1 | hypothetical protein | - |
| E5N97_RS24910 () | 9634..10272 | + | 639 | WP_000554823.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| E5N97_RS24915 () | 10309..10728 | + | 420 | WP_001229397.1 | HNH endonuclease | - |
| E5N97_RS24920 () | 10725..12551 | + | 1827 | WP_000827528.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| E5N97_RS24925 () | 12562..12777 | + | 216 | WP_000700023.1 | conjugal transfer protein TrbE | - |
| E5N97_RS24930 () | 12789..13538 | + | 750 | WP_001226854.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| E5N97_RS24935 () | 13752..14045 | + | 294 | WP_001233881.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| E5N97_RS24940 () | 14032..14580 | + | 549 | WP_000055840.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| E5N97_RS24945 () | 14570..15952 | + | 1383 | WP_001161719.1 | conjugal transfer protein TraH | - |
| E5N97_RS24950 () | 15949..18771 | + | 2823 | WP_001007086.1 | conjugal transfer mating pair stabilization protein TraG | - |
| E5N97_RS24955 () | 18787..19281 | + | 495 | WP_010999946.1 | entry exclusion protein | - |
| E5N97_RS24960 () | 19317..20048 | + | 732 | WP_000782438.1 | complement resistance protein TraT | - |
| E5N97_RS24965 () | 20425..22587 | + | 2163 | WP_000009318.1 | type IV conjugative transfer system coupling protein TraD | - |
| E5N97_RS24970 () | 22596..22994 | - | 399 | WP_000911322.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| E5N97_RS24975 () | 22994..23224 | - | 231 | WP_001526804.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| E5N97_RS24980 () | 23303..28561 | + | 5259 | WP_000986921.1 | conjugative transfer relaxase/helicase TraI | - |
| E5N97_RS24985 () | 28581..29321 | + | 741 | WP_000177629.1 | conjugal transfer pilus acetylase TraX | - |
| E5N97_RS24990 () | 29376..29939 | + | 564 | WP_000139307.1 | fertility inhibition protein FinO | - |
| E5N97_RS24995 () | 30054..30338 | + | 285 | WP_000477658.1 | hypothetical protein | - |
| E5N97_RS25000 () | 30351..30506 | + | 156 | WP_000983042.1 | hypothetical protein | - |
| E5N97_RS25005 () | 30672..31114 | + | 443 | Protein_33 | phospholipase | - |
| E5N97_RS25015 () | 31293..31559 | + | 267 | WP_010999936.1 | replication regulatory protein RepA | - |
| E5N97_RS25020 () | 31809..31886 | + | 78 | WP_001541552.1 | RepA leader peptide Tap | - |
| E5N97_RS25025 () | 31867..32748 | + | 882 | WP_001738692.1 | incFII family plasmid replication initiator RepA | - |
| E5N97_RS25035 () | 33608..33829 | + | 222 | WP_071533052.1 | SdiA-regulated domain-containing protein | - |
| E5N97_RS25040 () | 33926..34684 | - | 759 | WP_000417898.1 | AraC family transcriptional regulator | - |
| E5N97_RS25045 () | 34951..35508 | - | 558 | WP_000725062.1 | complement resistance protein Rck | - |
| E5N97_RS25050 () | 35598..36497 | - | 900 | WP_010999938.1 | YjiK family protein | - |
| E5N97_RS25055 () | 36630..37283 | - | 654 | WP_000178592.1 | DsbA family protein | - |
| E5N97_RS25060 () | 37528..37878 | - | 351 | WP_001526811.1 | helix-turn-helix transcriptional regulator | - |
| E5N97_RS25065 () | 37863..38075 | - | 213 | WP_000004313.1 | transcriptional regulator PefI | - |
| E5N97_RS25070 () | 38507..39382 | - | 876 | WP_014343944.1 | hypothetical protein | - |
| E5N97_RS25075 () | 39635..40192 | - | 558 | WP_010999940.1 | membrane protein | - |
| E5N97_RS25080 () | 40207..40899 | - | 693 | WP_001038510.1 | fimbrial chaperone PefD | - |
| E5N97_RS25085 () | 40892..43300 | - | 2409 | WP_000007893.1 | outer membrane usher protein PefC | - |
| E5N97_RS25090 () | 43528..44046 | - | 519 | WP_000748205.1 | major pilin PefA | - |
| E5N97_RS25095 () | 44321..44623 | - | 303 | WP_000979451.1 | transcriptional regulator PefB | - |
| E5N97_RS25105 () | 45342..45723 | + | 382 | Protein_50 | NirD/YgiW/YdeI family stress tolerance protein | - |
| E5N97_RS25110 () | 46000..46336 | + | 337 | Protein_51 | site-specific integrase | - |
| E5N97_RS25115 () | 46595..47584 | - | 990 | WP_001527061.1 | RepB family plasmid replication initiator protein | - |
| E5N97_RS25120 () | 48078..48374 | - | 297 | WP_001687482.1 | hypothetical protein | - |
| E5N97_RS25130 () | 48858..49379 | - | 522 | WP_010999942.1 | hypothetical protein | - |
| E5N97_RS25135 () | 50055..50273 | + | 219 | WP_000813641.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| E5N97_RS25140 () | 50275..50580 | + | 306 | WP_001159863.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| E5N97_RS25145 () | 50582..50872 | + | 291 | WP_001266176.1 | hypothetical protein | - |
| E5N97_RS25150 () | 50869..51390 | + | 522 | WP_000198608.1 | hypothetical protein | - |
| E5N97_RS25155 () | 51425..52207 | + | 783 | WP_000082169.1 | site-specific integrase | - |
| E5N97_RS25160 () | 52216..52929 | + | 714 | Protein_60 | EAL domain-containing protein | - |
| E5N97_RS25170 () | 52933..53442 | + | 510 | WP_001541544.1 | CaiF/GrlA family transcriptional regulator | - |
| E5N97_RS25175 () | 53436..53921 | + | 486 | WP_000905606.1 | membrane protein | - |
| E5N97_RS25180 () | 54198..54485 | - | 288 | WP_071530243.1 | hypothetical protein | - |
| E5N97_RS25185 () | 54641..55201 | + | 561 | WP_000900095.1 | inverse autotransporter beta domain-containing protein | - |
| E5N97_RS25190 () | 55268..55618 | - | 351 | WP_001541541.1 | helix-turn-helix domain-containing protein | - |
| E5N97_RS25195 () | 55675..56099 | + | 425 | Protein_66 | IS200/IS605 family transposase | - |
| E5N97_RS25200 () | 56226..56876 | - | 651 | WP_001575489.1 | SPI-2 type III secretion system effector cysteine hydrolase SpvD | - |
| E5N97_RS25205 () | 57137..57862 | - | 726 | WP_001122242.1 | type III secretion system effector phosphothreonine lyase SpvC | - |
| E5N97_RS25210 () | 58143..59918 | - | 1776 | WP_001676648.1 | SPI-2 type III secretion system effector NAD(+)--protein-arginine ADP-ribosyltransferase SpvB | - |
| E5N97_RS25215 () | 60100..60867 | - | 768 | WP_001526990.1 | virulence protein SpvA | - |
| E5N97_RS25220 () | 61041..61205 | - | 165 | WP_001576629.1 | glycoside hydrolase family protein | - |
| E5N97_RS25225 () | 61379..62272 | - | 894 | WP_000346691.1 | virulence genes transcriptional activator SpvR | - |
| E5N97_RS25230 () | 62881..63918 | + | 1038 | WP_001121399.1 | IS630 family transposase | - |
| E5N97_RS25235 () | 64107..65132 | - | 1026 | WP_001576625.1 | ExeA family protein | - |
| E5N97_RS25240 () | 65065..66729 | - | 1665 | WP_000098783.1 | IS481 family transposase | - |
| E5N97_RS25245 () | 66713..67273 | - | 561 | WP_001240331.1 | recombinase family protein | - |
| E5N97_RS25250 () | 67480..68220 | - | 741 | WP_001541566.1 | carbonic anhydrase | - |
| E5N97_RS25260 () | 68875..69363 | - | 489 | WP_001135407.1 | hypothetical protein | - |
| E5N97_RS25265 () | 69622..70737 | + | 1116 | WP_001247118.1 | DNA-binding protein | - |
| E5N97_RS25270 () | 70823..71239 | + | 417 | WP_001541564.1 | hypothetical protein | - |
| E5N97_RS25275 () | 71423..71758 | + | 336 | WP_001527010.1 | hypothetical protein | - |
| E5N97_RS25280 () | 71815..72381 | + | 567 | WP_001541562.1 | DUF2913 family protein | - |
| E5N97_RS25285 () | 72413..73354 | - | 942 | WP_000728917.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| E5N97_RS25290 () | 73769..74974 | + | 1206 | WP_000427676.1 | AAA family ATPase | - |
| E5N97_RS25295 () | 74974..75948 | + | 975 | WP_000064274.1 | ParB/RepB/Spo0J family partition protein | - |
| E5N97_RS25300 () | 76030..77304 | - | 1275 | WP_000457541.1 | Y-family DNA polymerase | - |
| E5N97_RS25305 () | 77304..77726 | - | 423 | WP_000925627.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| E5N97_RS25310 () | 78237..78707 | + | 471 | WP_000490265.1 | hypothetical protein | - |
| E5N97_RS25315 () | 78700..79056 | + | 357 | WP_000369839.1 | hypothetical protein | - |
| E5N97_RS25325 () | 79438..80118 | + | 681 | WP_000088645.1 | DNA methylase | - |
| E5N97_RS25330 () | 80118..80339 | + | 222 | WP_001109588.1 | hypothetical protein | - |
| E5N97_RS25335 () | 80395..80808 | + | 414 | WP_000990114.1 | DUF1380 family protein | - |
| E5N97_RS25340 () | 80880..81644 | + | 765 | WP_001246548.1 | membrane protein | - |
| E5N97_RS25350 () | 82083..82574 | + | 492 | WP_149143712.1 | antirestriction protein | - |
| E5N97_RS25355 () | 82641..83075 | + | 435 | WP_000274533.1 | DUF1380 family protein | - |
| E5N97_RS25360 () | 83311..83634 | + | 324 | WP_000015983.1 | DNA polymerase III subunit theta | - |
| E5N97_RS25370 () | 84341..84859 | + | 519 | WP_000741240.1 | single-stranded DNA-binding protein SSB2 | - |
| E5N97_RS25375 () | 84914..85156 | + | 243 | WP_000131520.1 | DUF905 domain-containing protein | - |
| E5N97_RS25380 () | 85225..87222 | + | 1998 | WP_000117513.1 | ParB/RepB/Spo0J family partition protein | - |
| E5N97_RS25385 () | 87262..87696 | + | 435 | WP_010999943.1 | conjugation system SOS inhibitor PsiB | - |
| E5N97_RS25390 () | 87693..88430 | + | 738 | WP_000581933.1 | plasmid SOS inhibition protein A | - |
| E5N97_RS25395 () | 88940..89341 | + | 402 | Protein_102 | DUF945 domain-containing protein | - |
| E5N97_RS25400 () | 89403..89758 | + | 356 | Protein_103 | DUF945 domain-containing protein | - |
| E5N97_RS25405 () | 90069..90539 | - | 471 | WP_001526856.1 | transglycosylase SLT domain-containing protein | - |
| E5N97_RS25415 () | 90954..91334 | + | 381 | WP_136571529.1 | relaxosome protein TraM | - |
| E5N97_RS25420 () | 91527..92213 | + | 687 | WP_000336297.1 | PAS domain-containing protein | - |
| E5N97_RS25425 () | 92307..92534 | + | 228 | WP_001676655.1 | conjugal transfer relaxosome protein TraY | - |
| E5N97_RS25430 () | 92576..92938 | + | 363 | WP_001274201.1 | type IV conjugative transfer system pilin TraA | - |
| E5N97_RS25435 () | 92953..93264 | + | 312 | WP_000012129.1 | type IV conjugative transfer system protein TraL | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|