MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 81942 bp
Accession: NZ_CP039497 Location: 1..81942 Organism: Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000661 Replicon: plasmid pCFSAN000661
Accession: NZ_CP039497 Location: 1..81942 Organism: Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000661 Replicon: plasmid pCFSAN000661
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E3382_RS22950 () | 1..873 | + | 873 | Protein_0 | helix-turn-helix transcriptional regulator | - |
| E3382_RS22955 () | 1070..1771 | + | 702 | WP_023251326.1 | transcriptional activator SprB | - |
| E3382_RS22960 () | 1952..2344 | - | 393 | Protein_2 | transposase family protein | - |
| E3382_RS22965 () | 2360..3820 | - | 1461 | WP_000834698.1 | hypothetical protein | - |
| E3382_RS22970 () | 4302..4787 | - | 486 | Protein_4 | transposase | - |
| E3382_RS23460 () | 4877..5335 | - | 459 | WP_086790286.1 | LysR family transcriptional regulator | - |
| E3382_RS23465 () | 5700..6005 | - | 306 | WP_023193066.1 | hypothetical protein | - |
| E3382_RS22980 () | 5993..6163 | - | 171 | Protein_7 | transposase | - |
| E3382_RS22985 () | 6310..6555 | - | 246 | WP_131535392.1 | hypothetical protein | - |
| E3382_RS22995 () | 7774..7921 | + | 148 | Protein_9 | transposase | - |
| E3382_RS23000 () | 8078..10504 | - | 2427 | WP_000471149.1 | fimbrial biogenesis outer membrane usher protein | - |
| E3382_RS23005 () | 10524..11231 | - | 708 | WP_020833592.1 | molecular chaperone | - |
| E3382_RS23010 () | 11607..12806 | + | 1200 | WP_020833591.1 | IS256 family transposase | - |
| E3382_RS23015 () | 12886..13437 | - | 552 | WP_020833590.1 | hypothetical protein | - |
| E3382_RS23020 () | 14131..16878 | + | 2748 | WP_023193067.1 | inverse autotransporter beta domain-containing protein | - |
| E3382_RS23025 () | 16890..17942 | + | 1053 | WP_020833588.1 | Ig-like domain-containing protein | - |
| E3382_RS23030 () | 18141..18863 | + | 723 | WP_000742239.1 | LuxR C-terminal-related transcriptional regulator | - |
| E3382_RS23035 () | 19651..20022 | + | 372 | WP_100215268.1 | DUF1311 domain-containing protein | - |
| E3382_RS23040 () | 20842..21060 | + | 219 | WP_000813642.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| E3382_RS23045 () | 21062..21367 | + | 306 | WP_020833585.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| E3382_RS23050 () | 21676..22458 | + | 783 | WP_020833584.1 | site-specific integrase | - |
| E3382_RS23055 () | 22609..23550 | - | 942 | WP_000728920.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| E3382_RS23060 () | 24181..24435 | + | 255 | WP_001749329.1 | hypothetical protein | - |
| E3382_RS23065 () | 25124..26329 | + | 1206 | WP_000427674.1 | AAA family ATPase | - |
| E3382_RS23070 () | 26329..27303 | + | 975 | WP_020833582.1 | ParB/RepB/Spo0J family partition protein | - |
| E3382_RS23075 () | 27385..28659 | - | 1275 | WP_020833581.1 | Y-family DNA polymerase | - |
| E3382_RS23080 () | 28659..29082 | - | 424 | Protein_26 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| E3382_RS23085 () | 29262..29933 | - | 672 | WP_020833580.1 | SOS response-associated peptidase family protein | - |
| E3382_RS23090 () | 30293..30970 | + | 678 | WP_020833579.1 | DNA methylase | - |
| E3382_RS23095 () | 30970..31191 | + | 222 | WP_020833578.1 | hypothetical protein | - |
| E3382_RS23100 () | 31202..31621 | + | 420 | WP_020833577.1 | DUF1380 domain-containing protein | - |
| E3382_RS23105 () | 31676..32455 | + | 780 | WP_020833576.1 | hypothetical protein | - |
| E3382_RS23110 () | 32861..33367 | + | 507 | WP_020833575.1 | antirestriction protein ArdA | - |
| E3382_RS23115 () | 33410..33601 | + | 192 | WP_020833574.1 | hypothetical protein | - |
| E3382_RS23120 () | 33794..34047 | + | 254 | Protein_34 | DNA polymerase III subunit theta | - |
| E3382_RS23125 () | 34082..34398 | + | 317 | Protein_35 | hypothetical protein | - |
| E3382_RS23470 () | 34539..34760 | - | 222 | WP_114053208.1 | hypothetical protein | - |
| E3382_RS23135 () | 35091..35645 | + | 555 | WP_020833571.1 | single-stranded DNA-binding protein | - |
| E3382_RS23140 () | 35698..35940 | + | 243 | WP_024143550.1 | DUF905 domain-containing protein | - |
| E3382_RS23145 () | 36011..38044 | + | 2034 | WP_020833569.1 | ParB/RepB/Spo0J family partition protein | - |
| E3382_RS23150 () | 38085..38519 | + | 435 | WP_015059789.1 | conjugation system SOS inhibitor PsiB | - |
| E3382_RS23155 () | 38516..39244 | + | 729 | WP_020833568.1 | plasmid SOS inhibition protein A | - |
| E3382_RS23160 () | 39241..39594 | + | 354 | WP_020833567.1 | hypothetical protein | - |
| E3382_RS23165 () | 39949..40323 | + | 375 | WP_020833566.1 | hypothetical protein | - |
| E3382_RS23175 () | 41176..41580 | + | 405 | WP_020833565.1 | hypothetical protein | - |
| E3382_RS23180 () | 41637..41984 | + | 348 | WP_000550116.1 | hypothetical protein | - |
| E3382_RS23185 () | 42079..42225 | + | 147 | WP_001159046.1 | hypothetical protein | - |
| E3382_RS23190 () | 42272..43096 | + | 825 | WP_020833564.1 | N-6 DNA methylase | - |
| E3382_RS23195 () | 43743..44273 | + | 531 | WP_000556935.1 | antirestriction protein | - |
| E3382_RS23200 () | 44284..44739 | - | 456 | WP_020833563.1 | transglycosylase SLT domain-containing protein | - |
| E3382_RS23205 () | 45208..45588 | + | 381 | WP_020833562.1 | relaxosome protein TraM | - |
| E3382_RS23210 () | 45885..46334 | + | 450 | WP_020833561.1 | helix-turn-helix domain-containing protein | - |
| E3382_RS23215 () | 46540..46773 | + | 234 | WP_000662610.1 | TraY domain-containing protein | - |
| E3382_RS23220 () | 46890..47249 | + | 360 | WP_001054221.1 | type IV conjugative transfer system pilin TraA | - |
| E3382_RS23225 () | 47251..47556 | + | 306 | WP_000398849.1 | type IV conjugative transfer system protein TraL | - |
| E3382_RS23230 () | 47576..48139 | + | 564 | WP_001535119.1 | type IV conjugative transfer system protein TraE | - |
| E3382_RS23235 () | 48129..48869 | + | 741 | WP_020833560.1 | type-F conjugative transfer system secretin TraK | - |
| E3382_RS23240 () | 48856..50217 | + | 1362 | WP_000024509.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| E3382_RS23245 () | 50328..50552 | + | 225 | WP_008455352.1 | TraR/DksA C4-type zinc finger protein | - |
| E3382_RS23250 () | 50556..51008 | + | 453 | WP_020833558.1 | hypothetical protein | - |
| E3382_RS23255 () | 51026..51640 | + | 615 | WP_020833557.1 | type IV conjugative transfer system lipoprotein TraV | - |
| E3382_RS23260 () | 51651..54242 | + | 2592 | WP_001808381.1 | type IV secretion system protein TraC | - |
| E3382_RS23265 () | 54239..54703 | + | 465 | WP_024143549.1 | type-F conjugative transfer system protein TrbI | - |
| E3382_RS23270 () | 54703..55338 | + | 636 | WP_000715590.1 | type-F conjugative transfer system protein TraW | - |
| E3382_RS23275 () | 55335..56330 | + | 996 | WP_004558357.1 | conjugal transfer pilus assembly protein TraU | - |
| E3382_RS23280 () | 56341..56709 | + | 369 | WP_020833555.1 | hypothetical protein | - |
| E3382_RS23285 () | 56706..57320 | + | 615 | WP_020833554.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| E3382_RS23290 () | 57317..59170 | + | 1854 | WP_020833553.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| E3382_RS23295 () | 59167..59946 | + | 780 | WP_004558353.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| E3382_RS23300 () | 59968..60579 | + | 612 | WP_020833552.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| E3382_RS23305 () | 60579..61940 | + | 1362 | WP_020833551.1 | F-type conjugal transfer protein TraH | - |
| E3382_RS23310 () | 61942..64839 | + | 2898 | WP_020833550.1 | conjugal transfer mating pair stabilization protein TraG | - |
| E3382_RS23315 () | 64851..65411 | + | 561 | WP_020833549.1 | hypothetical protein | - |
| E3382_RS23320 () | 65587..66324 | + | 738 | WP_020833548.1 | complement resistance protein TraT | - |
| E3382_RS23325 () | 66475..68709 | + | 2235 | WP_020833547.1 | type IV conjugative transfer system coupling protein TraD | - |
| E3382_RS23330 () | 68709..74012 | + | 5304 | WP_020833546.1 | conjugative transfer relaxase/helicase TraI | - |
| E3382_RS23335 () | 74031..74597 | + | 567 | WP_000493830.1 | DUF2726 domain-containing protein | - |
| E3382_RS23340 () | 74594..75325 | + | 732 | WP_020833545.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| E3382_RS23345 () | 75565..76035 | + | 471 | Protein_78 | phospholipase D family protein | - |
| E3382_RS23350 () | 76179..76445 | + | 267 | WP_001576653.1 | replication regulatory protein RepA | - |
| E3382_RS23355 () | 76695..76772 | + | 78 | WP_001541552.1 | RepA leader peptide Tap | - |
| E3382_RS23360 () | 76753..77634 | + | 882 | WP_023193063.1 | incFII family plasmid replication initiator RepA | - |
| E3382_RS23370 () | 78590..78859 | + | 270 | WP_000084547.1 | hypothetical protein | - |
| E3382_RS23375 () | 78856..79137 | + | 282 | WP_000970006.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | - |
| E3382_RS23380 () | 79289..79879 | - | 591 | WP_031607984.1 | plasmid pRiA4b ORF-3 family protein | - |
| E3382_RS23385 () | 81125..81634 | + | 510 | WP_131535394.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|