MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 81938 bp
Accession: NZ_CP039466 Location: 1..81938 Organism: Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN001118 Replicon: plasmid pCFSAN001118
Accession: NZ_CP039466 Location: 1..81938 Organism: Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN001118 Replicon: plasmid pCFSAN001118
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E3387_RS23020 () | 1..2592 | + | 2592 | WP_001808381.1 | type IV secretion system protein TraC | - |
| E3387_RS23025 () | 2589..3053 | + | 465 | WP_024143549.1 | type-F conjugative transfer system protein TrbI | - |
| E3387_RS23030 () | 3053..3688 | + | 636 | WP_000715590.1 | type-F conjugative transfer system protein TraW | - |
| E3387_RS23035 () | 3685..4680 | + | 996 | WP_004558357.1 | conjugal transfer pilus assembly protein TraU | - |
| E3387_RS23040 () | 4691..5059 | + | 369 | WP_020833555.1 | hypothetical protein | - |
| E3387_RS23045 () | 5056..5670 | + | 615 | WP_020833554.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| E3387_RS23050 () | 5667..7520 | + | 1854 | WP_020833553.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| E3387_RS23055 () | 7517..8296 | + | 780 | WP_004558353.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| E3387_RS23060 () | 8318..8929 | + | 612 | WP_020833552.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| E3387_RS23065 () | 8929..10290 | + | 1362 | WP_020833551.1 | F-type conjugal transfer protein TraH | - |
| E3387_RS23070 () | 10292..13102 | + | 2811 | Protein_10 | conjugal transfer mating pair stabilization protein TraG | - |
| E3387_RS23075 () | 13200..13760 | + | 561 | WP_020833549.1 | hypothetical protein | - |
| E3387_RS23080 () | 13936..14673 | + | 738 | WP_020833548.1 | complement resistance protein TraT | - |
| E3387_RS23085 () | 14824..17058 | + | 2235 | WP_020833547.1 | type IV conjugative transfer system coupling protein TraD | - |
| E3387_RS23090 () | 17058..22361 | + | 5304 | WP_020833546.1 | conjugative transfer relaxase/helicase TraI | - |
| E3387_RS23095 () | 22380..22946 | + | 567 | WP_000493830.1 | DUF2726 domain-containing protein | - |
| E3387_RS23100 () | 22943..23674 | + | 732 | WP_020833545.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| E3387_RS23105 () | 23914..24384 | + | 471 | Protein_17 | phospholipase D family protein | - |
| E3387_RS23110 () | 24528..24794 | + | 267 | WP_001576653.1 | replication regulatory protein RepA | - |
| E3387_RS23115 () | 25044..25121 | + | 78 | WP_001541552.1 | RepA leader peptide Tap | - |
| E3387_RS23120 () | 25102..25983 | + | 882 | WP_023193063.1 | incFII family plasmid replication initiator RepA | - |
| E3387_RS23130 () | 26939..27208 | + | 270 | WP_000084547.1 | hypothetical protein | Antitoxin Detail |
| E3387_RS23135 () | 27205..27486 | + | 282 | WP_000970006.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | Toxin Detail |
| E3387_RS23140 () | 27638..28228 | - | 591 | WP_031607984.1 | plasmid pRiA4b ORF-3 family protein | - |
| E3387_RS23145 () | 29473..29982 | + | 510 | WP_131535394.1 | hypothetical protein | - |
| E3387_RS23150 () | 30291..31163 | + | 873 | WP_077915507.1 | helix-turn-helix transcriptional regulator | - |
| E3387_RS23155 () | 31360..32061 | + | 702 | WP_023251326.1 | transcriptional activator SprB | - |
| E3387_RS23160 () | 32242..32634 | - | 393 | Protein_27 | transposase family protein | - |
| E3387_RS23165 () | 32650..33966 | - | 1317 | WP_136537661.1 | hypothetical protein | - |
| E3387_RS23170 () | 34591..35076 | - | 486 | Protein_29 | transposase | - |
| E3387_RS23550 () | 35166..35624 | - | 459 | WP_086790286.1 | LysR family transcriptional regulator | - |
| E3387_RS23555 () | 35989..36294 | - | 306 | WP_023193066.1 | hypothetical protein | - |
| E3387_RS23180 () | 36282..36452 | - | 171 | Protein_32 | transposase | - |
| E3387_RS23185 () | 36599..36844 | - | 246 | WP_131535392.1 | hypothetical protein | - |
| E3387_RS23195 () | 38063..38210 | + | 148 | Protein_34 | transposase | - |
| E3387_RS23200 () | 38367..40793 | - | 2427 | WP_000471149.1 | fimbrial biogenesis outer membrane usher protein | - |
| E3387_RS23205 () | 40813..41499 | - | 687 | WP_136555962.1 | molecular chaperone | - |
| E3387_RS23210 () | 42023..43222 | + | 1200 | WP_020833591.1 | IS256 family transposase | - |
| E3387_RS23215 () | 43302..43853 | - | 552 | WP_020833590.1 | hypothetical protein | - |
| E3387_RS23220 () | 44547..47294 | + | 2748 | WP_023193067.1 | inverse autotransporter beta domain-containing protein | - |
| E3387_RS23225 () | 47306..48358 | + | 1053 | WP_020833588.1 | Ig-like domain-containing protein | - |
| E3387_RS23230 () | 48557..49279 | + | 723 | WP_000742239.1 | LuxR C-terminal-related transcriptional regulator | - |
| E3387_RS23235 () | 50067..50438 | + | 372 | WP_100215268.1 | DUF1311 domain-containing protein | - |
| E3387_RS23240 () | 51258..51476 | + | 219 | WP_000813642.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| E3387_RS23245 () | 51478..51783 | + | 306 | WP_020833585.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| E3387_RS23250 () | 52092..52874 | + | 783 | WP_020833584.1 | site-specific integrase | - |
| E3387_RS23255 () | 53025..53966 | - | 942 | WP_000728920.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| E3387_RS23260 () | 54597..54851 | + | 255 | WP_001749329.1 | hypothetical protein | - |
| E3387_RS23265 () | 55540..56745 | + | 1206 | WP_000427674.1 | AAA family ATPase | - |
| E3387_RS23270 () | 56745..57719 | + | 975 | WP_020833582.1 | ParB/RepB/Spo0J family partition protein | - |
| E3387_RS23275 () | 57801..59075 | - | 1275 | WP_020833581.1 | Y-family DNA polymerase | - |
| E3387_RS23280 () | 59075..59498 | - | 424 | Protein_51 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| E3387_RS23285 () | 59678..60349 | - | 672 | WP_020833580.1 | SOS response-associated peptidase family protein | - |
| E3387_RS23290 () | 60709..61386 | + | 678 | WP_020833579.1 | DNA methylase | - |
| E3387_RS23295 () | 61386..61607 | + | 222 | WP_020833578.1 | hypothetical protein | - |
| E3387_RS23300 () | 61618..62037 | + | 420 | WP_020833577.1 | DUF1380 domain-containing protein | - |
| E3387_RS23305 () | 62092..62871 | + | 780 | WP_020833576.1 | hypothetical protein | - |
| E3387_RS23310 () | 63277..63783 | + | 507 | WP_020833575.1 | antirestriction protein ArdA | - |
| E3387_RS23315 () | 63826..64017 | + | 192 | WP_020833574.1 | hypothetical protein | - |
| E3387_RS23320 () | 64210..64463 | + | 254 | Protein_59 | DNA polymerase III subunit theta | - |
| E3387_RS23325 () | 64498..64814 | + | 317 | Protein_60 | hypothetical protein | - |
| E3387_RS23560 () | 64955..65176 | - | 222 | WP_114053208.1 | hypothetical protein | - |
| E3387_RS23335 () | 65507..66061 | + | 555 | WP_020833571.1 | single-stranded DNA-binding protein | - |
| E3387_RS23340 () | 66114..66356 | + | 243 | WP_024143550.1 | DUF905 domain-containing protein | - |
| E3387_RS23345 () | 66427..68460 | + | 2034 | WP_020833569.1 | ParB/RepB/Spo0J family partition protein | - |
| E3387_RS23350 () | 68501..68935 | + | 435 | WP_015059789.1 | conjugation system SOS inhibitor PsiB | - |
| E3387_RS23355 () | 68932..69660 | + | 729 | WP_020833568.1 | plasmid SOS inhibition protein A | - |
| E3387_RS23360 () | 69657..70010 | + | 354 | WP_020833567.1 | hypothetical protein | - |
| E3387_RS23365 () | 70365..70739 | + | 375 | WP_020833566.1 | hypothetical protein | - |
| E3387_RS23370 () | 71465..71869 | + | 405 | WP_020833565.1 | hypothetical protein | - |
| E3387_RS23375 () | 71926..72273 | + | 348 | WP_000550116.1 | hypothetical protein | - |
| E3387_RS23380 () | 72368..72514 | + | 147 | WP_001159046.1 | hypothetical protein | - |
| E3387_RS23385 () | 72561..73385 | + | 825 | WP_020833564.1 | N-6 DNA methylase | - |
| E3387_RS23390 () | 74032..74562 | + | 531 | WP_000556935.1 | antirestriction protein | - |
| E3387_RS23395 () | 74573..75028 | - | 456 | WP_020833563.1 | transglycosylase SLT domain-containing protein | - |
| E3387_RS23400 () | 75497..75877 | + | 381 | WP_020833562.1 | relaxosome protein TraM | - |
| E3387_RS23405 () | 76174..76622 | + | 449 | Protein_76 | helix-turn-helix domain-containing protein | - |
| E3387_RS23410 () | 76828..77061 | + | 234 | WP_000662610.1 | TraY domain-containing protein | - |
| E3387_RS23415 () | 77178..77537 | + | 360 | WP_001054221.1 | type IV conjugative transfer system pilin TraA | - |
| E3387_RS23420 () | 77539..77844 | + | 306 | WP_000398849.1 | type IV conjugative transfer system protein TraL | - |
| E3387_RS23425 () | 77864..78427 | + | 564 | WP_001535119.1 | type IV conjugative transfer system protein TraE | - |
| E3387_RS23430 () | 78417..79157 | + | 741 | WP_020833560.1 | type-F conjugative transfer system secretin TraK | - |
| E3387_RS23435 () | 79144..80505 | + | 1362 | WP_000024509.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| E3387_RS23440 () | 80616..80840 | + | 225 | WP_008455352.1 | TraR/DksA C4-type zinc finger protein | - |
| E3387_RS23445 () | 80844..81296 | + | 453 | WP_020833558.1 | hypothetical protein | - |
| E3387_RS23450 () | 81314..81928 | + | 615 | WP_020833557.1 | type IV conjugative transfer system lipoprotein TraV | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|