MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 40972 bp
Accession: NZ_CP039233 Location: 1..40972 Organism: Piscirickettsia salmonis strain SR1 Replicon: plasmid unnamed6
Accession: NZ_CP039233 Location: 1..40972 Organism: Piscirickettsia salmonis strain SR1 Replicon: plasmid unnamed6
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PsalSR1_RS24495 () | 8..991 | + | 984 | WP_196427444.1 | ParA family protein | - |
| PsalSR1_RS24500 () | 1008..2489 | + | 1482 | WP_155589645.1 | hypothetical protein | - |
| PsalSR1_RS24505 () | 2917..4146 | - | 1230 | WP_155589646.1 | IS91 family transposase ISVsa9 | Transposase |
| PsalSR1_RS24510 () | 4289..4522 | - | 234 | Protein_3 | site-specific integrase | - |
| PsalSR1_RS24515 () | 4709..4891 | + | 183 | WP_155589695.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| PsalSR1_RS24520 () | 4906..5310 | + | 405 | WP_155589647.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| PsalSR1_RS24525 () | 5398..6198 | + | 801 | WP_196427445.1 | methyltransferase domain-containing protein | - |
| PsalSR1_RS24530 () | 6195..7007 | - | 813 | WP_155589649.1 | Transcriptional activator protein AnoR | VF |
| PsalSR1_RS24535 () | 7011..8255 | - | 1245 | WP_155589650.1 | MFS transporter | - |
| PsalSR1_RS24540 () | 8470..8613 | + | 144 | WP_155589651.1 | hypothetical protein | - |
| PsalSR1_RS24545 () | 8638..9069 | + | 432 | WP_155589652.1 | hypothetical protein | - |
| PsalSR1_RS24550 () | 9089..9862 | + | 774 | WP_196427446.1 | queuosine precursor transporter | - |
| PsalSR1_RS24555 () | 9845..10630 | - | 786 | WP_155589654.1 | Malonyl-[acyl-carrier protein] O-methyltransferase | VF |
| PsalSR1_RS24560 () | 10763..11506 | + | 744 | WP_016211067.1 | helix-turn-helix transcriptional regulator | - |
| PsalSR1_RS24565 () | 11720..12025 | + | 306 | WP_155589655.1 | hypothetical protein | - |
| PsalSR1_RS24570 () | 12180..12479 | + | 300 | WP_155589656.1 | hypothetical protein | - |
| PsalSR1_RS24575 () | 12526..13341 | + | 816 | WP_155589657.1 | hypothetical protein | - |
| PsalSR1_RS24580 () | 13364..13924 | + | 561 | WP_155589658.1 | hypothetical protein | - |
| PsalSR1_RS24585 () | 13893..14255 | + | 363 | WP_155589659.1 | hypothetical protein | - |
| PsalSR1_RS24590 () | 14248..14595 | + | 348 | WP_155589660.1 | hypothetical protein | - |
| PsalSR1_RS24595 () | 14592..14831 | + | 240 | WP_155589661.1 | hypothetical protein | - |
| PsalSR1_RS24600 () | 14824..15213 | + | 390 | WP_155589662.1 | hypothetical protein | - |
| PsalSR1_RS24605 () | 15234..15494 | + | 261 | WP_155589663.1 | hypothetical protein | - |
| PsalSR1_RS24610 () | 15496..15969 | + | 474 | WP_155589664.1 | single-stranded DNA-binding protein | - |
| PsalSR1_RS24615 () | 16093..16509 | + | 417 | WP_155589665.1 | hypothetical protein | - |
| PsalSR1_RS24620 () | 16657..16929 | + | 273 | WP_196427447.1 | type II toxin-antitoxin system MqsR family toxin | - |
| PsalSR1_RS24625 () | 16931..17416 | + | 486 | WP_155589667.1 | type II toxin-antitoxin system MqsA family antitoxin | - |
| PsalSR1_RS24630 () | 17452..18450 | + | 999 | WP_155589668.1 | DNA-protecting protein DprA | - |
| PsalSR1_RS24635 () | 18461..19717 | + | 1257 | WP_155589669.1 | HAD hydrolase-like protein | - |
| PsalSR1_RS24640 () | 19909..20292 | + | 384 | WP_155589670.1 | HNH endonuclease | - |
| PsalSR1_RS24645 () | 20366..20860 | + | 495 | WP_155589671.1 | phage terminase small subunit P27 family | - |
| PsalSR1_RS24650 () | 20853..22277 | + | 1425 | WP_196427440.1 | terminase large subunit | - |
| PsalSR1_RS24655 () | 22282..22536 | + | 255 | WP_196427441.1 | hypothetical protein | - |
| PsalSR1_RS24660 () | 22533..23774 | + | 1242 | WP_155589674.1 | phage portal protein | - |
| PsalSR1_RS24665 () | 23722..24165 | + | 444 | WP_155589675.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| PsalSR1_RS24670 () | 24185..24391 | + | 207 | WP_196427442.1 | hypothetical protein | - |
| PsalSR1_RS24675 () | 24447..24830 | + | 384 | WP_155589677.1 | hypothetical protein | - |
| PsalSR1_RS24680 () | 24782..25639 | + | 858 | WP_155589678.1 | phage major capsid protein | - |
| PsalSR1_RS24685 () | 25760..27115 | + | 1356 | WP_155589679.1 | hypothetical protein | - |
| PsalSR1_RS25620 () | 27132..27287 | + | 156 | WP_196427443.1 | hypothetical protein | - |
| PsalSR1_RS24690 () | 27284..27595 | + | 312 | WP_155589680.1 | head-tail connector protein | - |
| PsalSR1_RS24695 () | 27592..27915 | + | 324 | WP_155589681.1 | phage head closure protein | - |
| PsalSR1_RS24700 () | 27924..28304 | + | 381 | Protein_42 | HK97 gp10 family phage protein | - |
| PsalSR1_RS24705 () | 28301..28651 | + | 351 | WP_155589682.1 | hypothetical protein | - |
| PsalSR1_RS24710 () | 28651..29073 | + | 423 | WP_155589683.1 | hypothetical protein | - |
| PsalSR1_RS24715 () | 29075..29397 | + | 323 | Protein_45 | hypothetical protein | - |
| PsalSR1_RS24720 () | 29442..29717 | + | 276 | WP_155589684.1 | DUF4035 domain-containing protein | - |
| PsalSR1_RS24725 () | 29721..31798 | + | 2078 | Protein_47 | phage tail tape measure protein | - |
| PsalSR1_RS24730 () | 31791..32132 | + | 342 | WP_155589685.1 | phage tail protein | - |
| PsalSR1_RS24735 () | 32129..32800 | + | 672 | WP_155589686.1 | phage minor tail protein L | - |
| PsalSR1_RS24740 () | 32751..33515 | + | 765 | WP_155589687.1 | C40 family peptidase | - |
| PsalSR1_RS24745 () | 33505..34062 | + | 558 | WP_155589688.1 | tail assembly protein | - |
| PsalSR1_RS24750 () | 34059..37346 | + | 3288 | WP_155589689.1 | host specificity protein J | - |
| PsalSR1_RS24755 () | 37346..38485 | + | 1140 | WP_155589690.1 | hypothetical protein | - |
| PsalSR1_RS24760 () | 38497..39150 | + | 654 | WP_155589691.1 | DUF4376 domain-containing protein | - |
| PsalSR1_RS24765 () | 39150..39587 | + | 438 | WP_155589692.1 | hypothetical protein | - |
| PsalSR1_RS24770 () | 39587..40015 | + | 429 | WP_155589693.1 | hypothetical protein | - |
| PsalSR1_RS24775 () | 40110..40341 | - | 232 | Protein_57 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|