MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 82130 bp
Accession: NZ_CP039203 Location: 1..82130 Organism: Piscirickettsia salmonis strain Psal-163 Replicon: plasmid unnamed2
Accession: NZ_CP039203 Location: 1..82130 Organism: Piscirickettsia salmonis strain Psal-163 Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Psal163_RS16650 () | 1..972 | + | 972 | WP_054300646.1 | transposase | - |
| Psal163_RS17340 () | 969..1145 | - | 177 | WP_172673426.1 | transposase | - |
| Psal163_RS17345 () | 1139..1363 | - | 225 | WP_196214208.1 | hypothetical protein | - |
| Psal163_RS16665 () | 1549..1848 | + | 300 | WP_075273685.1 | HU family DNA-binding protein | - |
| Psal163_RS16670 () | 1961..3661 | + | 1701 | WP_054300647.1 | DUF4338 domain-containing protein | - |
| Psal163_RS16675 () | 3687..4922 | + | 1236 | WP_054300648.1 | hypothetical protein | - |
| Psal163_RS16680 () | 5039..5365 | - | 327 | WP_054300674.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| Psal163_RS16685 () | 5367..5609 | - | 243 | WP_054300649.1 | hypothetical protein | Antitoxin Detail |
| Psal163_RS16690 () | 6023..6343 | - | 321 | WP_054300650.1 | hypothetical protein | - |
| Psal163_RS16695 () | 6364..6798 | - | 435 | WP_054300651.1 | hypothetical protein | - |
| Psal163_RS16700 () | 6805..7212 | - | 408 | WP_054300652.1 | hypothetical protein | - |
| Psal163_RS16705 () | 7311..7619 | - | 309 | WP_081007087.1 | helix-turn-helix transcriptional regulator | - |
| Psal163_RS16710 () | 7669..7929 | - | 261 | WP_054300654.1 | hypothetical protein | - |
| Psal163_RS16715 () | 7991..8548 | - | 558 | WP_054300675.1 | recombinase family protein | - |
| Psal163_RS16720 () | 8931..11630 | + | 2700 | WP_075278623.1 | ATP-dependent helicase | - |
| Psal163_RS16725 () | 11695..11958 | - | 264 | WP_054300655.1 | RNA-binding protein | - |
| Psal163_RS16730 () | 12450..12713 | + | 264 | WP_054300656.1 | hypothetical protein | - |
| Psal163_RS16735 () | 12715..13053 | + | 339 | WP_054300657.1 | hypothetical protein | - |
| Psal163_RS16740 () | 13180..14184 | + | 1005 | WP_075273679.1 | SIR2 family protein | - |
| Psal163_RS16745 () | 14197..15921 | + | 1725 | WP_054300659.1 | ATP-binding protein | - |
| Psal163_RS16750 () | 16425..18692 | - | 2268 | WP_054300661.1 | hypothetical protein | - |
| Psal163_RS16755 () | 19441..22830 | - | 3390 | WP_054300676.1 | TM0106 family RecB-like putative nuclease | - |
| Psal163_RS16760 () | 22907..24265 | - | 1359 | WP_075273687.1 | DEAD/DEAH box helicase | - |
| Psal163_RS16765 () | 24355..24921 | - | 567 | WP_054300664.1 | recombinase family protein | - |
| Psal163_RS16770 () | 24925..25611 | - | 687 | WP_017377658.1 | Fic family protein | - |
| Psal163_RS16775 () | 26109..26633 | - | 525 | WP_016212199.1 | hypothetical protein | - |
| Psal163_RS16780 () | 26626..27648 | - | 1023 | WP_016212198.1 | AAA family ATPase | - |
| Psal163_RS16785 () | 28703..29749 | + | 1047 | WP_033923684.1 | hypothetical protein | - |
| Psal163_RS16790 () | 30298..31083 | + | 786 | WP_054300665.1 | class I SAM-dependent methyltransferase | - |
| Psal163_RS16795 () | 31151..32281 | + | 1131 | WP_054300584.1 | hypothetical protein | - |
| Psal163_RS16800 () | 32320..32760 | + | 441 | WP_054300583.1 | thioesterase family protein | - |
| Psal163_RS16805 () | 32768..33505 | + | 738 | WP_054300666.1 | SDR family oxidoreductase | - |
| Psal163_RS16810 () | 33502..34071 | - | 570 | WP_054300667.1 | hypothetical protein | - |
| Psal163_RS16815 () | 34178..34750 | - | 573 | WP_155047022.1 | helix-turn-helix transcriptional regulator | - |
| Psal163_RS16820 () | 35204..35917 | + | 714 | WP_054300669.1 | class I SAM-dependent methyltransferase | - |
| Psal163_RS16825 () | 35930..36403 | + | 474 | WP_054300670.1 | hypothetical protein | - |
| Psal163_RS16830 () | 36419..37162 | + | 744 | WP_081007085.1 | queuosine precursor transporter | - |
| Psal163_RS16835 () | 37162..37608 | + | 447 | WP_054300671.1 | helix-turn-helix domain-containing protein | - |
| Psal163_RS16840 () | 37580..38194 | - | 615 | WP_054300672.1 | helix-turn-helix domain-containing protein | - |
| Psal163_RS16845 () | 38384..38575 | + | 192 | WP_054300607.1 | hypothetical protein | - |
| Psal163_RS16850 () | 38953..39210 | + | 258 | WP_155053509.1 | hypothetical protein | - |
| Psal163_RS16855 () | 39366..40010 | + | 645 | WP_054300609.1 | hypothetical protein | - |
| Psal163_RS16860 () | 40012..40332 | + | 321 | WP_054300610.1 | hypothetical protein | - |
| Psal163_RS16865 () | 40347..40637 | + | 291 | WP_054300611.1 | type IV conjugative transfer system protein TraL | - |
| Psal163_RS16870 () | 40645..41214 | + | 570 | WP_054300612.1 | hypothetical protein | - |
| Psal163_RS16875 () | 41207..41911 | + | 705 | WP_054300613.1 | type-F conjugative transfer system secretin TraK | - |
| Psal163_RS16880 () | 41921..43390 | + | 1470 | WP_054300614.1 | hypothetical protein | - |
| Psal163_RS16885 () | 43396..43839 | + | 444 | WP_054300615.1 | type IV conjugative transfer system lipoprotein TraV | - |
| Psal163_RS16890 () | 43927..44949 | + | 1023 | WP_054300616.1 | type IV secretion system DNA-binding domain-containing protein | - |
| Psal163_RS16895 () | 44998..47577 | + | 2580 | WP_054300617.1 | type IV secretion system protein TraC | - |
| Psal163_RS16900 () | 47603..47911 | + | 309 | WP_155066178.1 | hypothetical protein | - |
| Psal163_RS16905 () | 47904..48521 | + | 618 | WP_054300619.1 | type-F conjugative transfer system protein TraW | - |
| Psal163_RS16910 () | 48540..49010 | + | 471 | WP_054300620.1 | hypothetical protein | - |
| Psal163_RS16915 () | 49024..49326 | + | 303 | WP_054300621.1 | hypothetical protein | - |
| Psal163_RS16920 () | 49362..49664 | + | 303 | WP_054300622.1 | hypothetical protein | - |
| Psal163_RS16925 () | 49657..50646 | + | 990 | WP_054300623.1 | conjugal transfer pilus assembly protein TraU | - |
| Psal163_RS16930 () | 50657..51325 | + | 669 | WP_054300624.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| Psal163_RS16935 () | 51325..53220 | + | 1896 | WP_054300625.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| Psal163_RS16940 () | 53217..54029 | + | 813 | WP_054300626.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| Psal163_RS16945 () | 54026..54517 | + | 492 | WP_054300627.1 | conjugal transfer protein TraF | - |
| Psal163_RS16950 () | 54510..55892 | + | 1383 | WP_054300628.1 | conjugal transfer protein TraH | - |
| Psal163_RS16955 () | 55894..58683 | + | 2790 | WP_054300629.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| Psal163_RS16960 () | 58691..59008 | - | 318 | WP_054300630.1 | hypothetical protein | - |
| Psal163_RS16965 () | 59091..59834 | + | 744 | WP_054300631.1 | complement resistance protein TraT | - |
| Psal163_RS16970 () | 59873..60193 | + | 321 | WP_054300632.1 | hypothetical protein | - |
| Psal163_RS16975 () | 60761..62755 | + | 1995 | WP_054300634.1 | type IV conjugative transfer system coupling protein TraD | - |
| Psal163_RS16980 () | 62758..63507 | + | 750 | WP_054300635.1 | thioredoxin domain-containing protein | - |
| Psal163_RS16985 () | 63519..63698 | + | 180 | WP_054300636.1 | hypothetical protein | - |
| Psal163_RS16990 () | 63789..69767 | + | 5979 | WP_081007081.1 | conjugative transfer relaxase/helicase TraI | - |
| Psal163_RS16995 () | 69762..70091 | - | 330 | WP_054300638.1 | hypothetical protein | - |
| Psal163_RS17000 () | 70082..70525 | - | 444 | WP_054300639.1 | hypothetical protein | - |
| Psal163_RS17005 () | 71112..71405 | + | 294 | WP_036774899.1 | hypothetical protein | - |
| Psal163_RS17010 () | 71469..72257 | - | 789 | WP_054300640.1 | hypothetical protein | - |
| Psal163_RS17015 () | 72461..73347 | + | 887 | WP_155047025.1 | IS630 family transposase | - |
| Psal163_RS17020 () | 73351..73839 | - | 489 | WP_054300642.1 | DnaJ domain-containing protein | - |
| Psal163_RS17025 () | 73908..74279 | - | 372 | WP_047927049.1 | hypothetical protein | - |
| Psal163_RS17030 () | 74727..74960 | + | 234 | WP_027242580.1 | hypothetical protein | - |
| Psal163_RS17035 () | 75137..77323 | + | 2187 | WP_027242581.1 | ATP-dependent RecD-like DNA helicase | - |
| Psal163_RS17040 () | 77333..77734 | - | 402 | WP_027242582.1 | helix-turn-helix domain-containing protein | - |
| Psal163_RS17045 () | 77731..78042 | - | 312 | WP_027242583.1 | type II toxin-antitoxin system HigB family toxin | - |
| Psal163_RS17050 () | 78156..78425 | - | 270 | WP_054300643.1 | WGR domain-containing protein | - |
| Psal163_RS17055 () | 78522..80384 | + | 1863 | WP_027242576.1 | RecX family transcriptional regulator | - |
| Psal163_RS17060 () | 80418..80903 | + | 486 | WP_027242575.1 | hypothetical protein | - |
| Psal163_RS17065 () | 80914..81141 | - | 228 | Protein_83 | transposase | - |
| Psal163_RS17070 () | 81137..81313 | + | 177 | Protein_84 | IS30 family transposase | - |
| Psal163_RS17075 () | 81310..81654 | - | 345 | WP_054300644.1 | hypothetical protein | - |
| Psal163_RS17080 () | 81763..82074 | - | 312 | WP_054300645.1 | HU family DNA-binding protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|