MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 82129 bp
Accession: NZ_CP039067 Location: 1..82129 Organism: Piscirickettsia salmonis strain Psal-107 Replicon: plasmid unnamed2
Accession: NZ_CP039067 Location: 1..82129 Organism: Piscirickettsia salmonis strain Psal-107 Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Psal107_RS16605 () | 1..972 | + | 972 | WP_054300646.1 | IS701 family transposase ISMhu9 | Transposase |
| Psal107_RS17755 () | 969..1145 | - | 177 | WP_172673426.1 | transposase | - |
| Psal107_RS17760 () | 1139..1363 | - | 225 | WP_196214208.1 | hypothetical protein | - |
| Psal107_RS16620 () | 1549..1848 | + | 300 | WP_075273685.1 | HU family DNA-binding protein | - |
| Psal107_RS16625 () | 1961..3661 | + | 1701 | WP_054300647.1 | DUF4338 domain-containing protein | - |
| Psal107_RS16630 () | 3687..4922 | + | 1236 | WP_054300648.1 | hypothetical protein | - |
| Psal107_RS16635 () | 5039..5365 | - | 327 | WP_054300674.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| Psal107_RS16640 () | 5367..5609 | - | 243 | WP_054300649.1 | hypothetical protein | Antitoxin Detail |
| Psal107_RS16645 () | 6023..6343 | - | 321 | WP_054300650.1 | hypothetical protein | - |
| Psal107_RS16650 () | 6364..6798 | - | 435 | WP_054300651.1 | hypothetical protein | - |
| Psal107_RS16655 () | 6805..7212 | - | 408 | WP_054300652.1 | hypothetical protein | - |
| Psal107_RS16660 () | 7311..7619 | - | 309 | WP_081007087.1 | helix-turn-helix transcriptional regulator | - |
| Psal107_RS16665 () | 7669..7929 | - | 261 | WP_054300654.1 | hypothetical protein | - |
| Psal107_RS16670 () | 7991..8548 | - | 558 | WP_054300675.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| Psal107_RS16675 () | 8931..11630 | + | 2700 | WP_075278623.1 | ATP-dependent helicase | - |
| Psal107_RS16680 () | 11695..11958 | - | 264 | WP_054300655.1 | RNA-binding protein | - |
| Psal107_RS16685 () | 12450..12713 | + | 264 | WP_054300656.1 | hypothetical protein | - |
| Psal107_RS16690 () | 12715..13053 | + | 339 | WP_054300657.1 | hypothetical protein | - |
| Psal107_RS16695 () | 13180..14184 | + | 1005 | WP_075273679.1 | SIR2 family protein | - |
| Psal107_RS16700 () | 14197..15921 | + | 1725 | WP_054300659.1 | ATP-binding protein | - |
| Psal107_RS16705 () | 16425..18692 | - | 2268 | WP_054300661.1 | hypothetical protein | - |
| Psal107_RS16710 () | 19441..22830 | - | 3390 | WP_054300676.1 | TM0106 family RecB-like putative nuclease | - |
| Psal107_RS16715 () | 22907..24265 | - | 1359 | WP_075273687.1 | DEAD/DEAH box helicase | - |
| Psal107_RS16720 () | 24355..24921 | - | 567 | WP_054300664.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| Psal107_RS16725 () | 24925..25611 | - | 687 | WP_017377658.1 | Fic family protein | - |
| Psal107_RS16730 () | 26109..26633 | - | 525 | WP_016212199.1 | hypothetical protein | - |
| Psal107_RS16735 () | 26626..27648 | - | 1023 | WP_016212198.1 | AAA family ATPase | - |
| Psal107_RS16740 () | 28702..29748 | + | 1047 | WP_033923684.1 | hypothetical protein | - |
| Psal107_RS16745 () | 30297..31082 | + | 786 | WP_054300665.1 | class I SAM-dependent methyltransferase | - |
| Psal107_RS16750 () | 31150..32280 | + | 1131 | WP_054300584.1 | hypothetical protein | - |
| Psal107_RS16755 () | 32319..32759 | + | 441 | WP_054300583.1 | thioesterase family protein | - |
| Psal107_RS16760 () | 32767..33504 | + | 738 | WP_054300666.1 | 3-oxoacyl-[acyl-carrier-protein] reductase FabG | VF |
| Psal107_RS16765 () | 33501..34070 | - | 570 | WP_054300667.1 | hypothetical protein | - |
| Psal107_RS16770 () | 34177..34749 | - | 573 | WP_155047022.1 | helix-turn-helix transcriptional regulator | - |
| Psal107_RS16775 () | 35203..35916 | + | 714 | WP_054300669.1 | class I SAM-dependent methyltransferase | - |
| Psal107_RS16780 () | 35929..36402 | + | 474 | WP_054300670.1 | hypothetical protein | - |
| Psal107_RS16785 () | 36418..37161 | + | 744 | WP_081007085.1 | queuosine precursor transporter | - |
| Psal107_RS16790 () | 37161..37607 | + | 447 | WP_054300671.1 | helix-turn-helix domain-containing protein | - |
| Psal107_RS16795 () | 37579..38193 | - | 615 | WP_054300672.1 | helix-turn-helix domain-containing protein | - |
| Psal107_RS16800 () | 38383..38574 | + | 192 | WP_054300607.1 | hypothetical protein | - |
| Psal107_RS16805 () | 38952..39209 | + | 258 | WP_155053509.1 | hypothetical protein | - |
| Psal107_RS16810 () | 39365..40009 | + | 645 | WP_054300609.1 | hypothetical protein | - |
| Psal107_RS16815 () | 40011..40331 | + | 321 | WP_054300610.1 | hypothetical protein | - |
| Psal107_RS16820 () | 40346..40636 | + | 291 | WP_054300611.1 | type IV conjugative transfer system protein TraL | - |
| Psal107_RS16825 () | 40644..41213 | + | 570 | WP_054300612.1 | hypothetical protein | - |
| Psal107_RS16830 () | 41206..41910 | + | 705 | WP_054300613.1 | type-F conjugative transfer system secretin TraK | - |
| Psal107_RS16835 () | 41920..43389 | + | 1470 | WP_054300614.1 | hypothetical protein | - |
| Psal107_RS16840 () | 43395..43838 | + | 444 | WP_054300615.1 | type IV conjugative transfer system lipoprotein TraV | - |
| Psal107_RS16845 () | 43926..44948 | + | 1023 | WP_054300616.1 | type IV secretion system DNA-binding domain-containing protein | - |
| Psal107_RS16850 () | 44997..47576 | + | 2580 | WP_054300617.1 | type IV secretion system protein TraC | - |
| Psal107_RS16855 () | 47551..47910 | + | 360 | WP_155047024.1 | hypothetical protein | - |
| Psal107_RS16860 () | 47903..48520 | + | 618 | WP_054300619.1 | type-F conjugative transfer system protein TraW | - |
| Psal107_RS16865 () | 48539..49009 | + | 471 | WP_054300620.1 | hypothetical protein | - |
| Psal107_RS16870 () | 49023..49325 | + | 303 | WP_054300621.1 | hypothetical protein | - |
| Psal107_RS16875 () | 49361..49663 | + | 303 | WP_054300622.1 | hypothetical protein | - |
| Psal107_RS16880 () | 49656..50645 | + | 990 | WP_054300623.1 | conjugal transfer pilus assembly protein TraU | - |
| Psal107_RS16885 () | 50656..51324 | + | 669 | WP_054300624.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| Psal107_RS16890 () | 51324..53219 | + | 1896 | WP_054300625.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| Psal107_RS16895 () | 53216..54028 | + | 813 | WP_054300626.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| Psal107_RS16900 () | 54025..54516 | + | 492 | WP_054300627.1 | conjugal transfer protein TraF | - |
| Psal107_RS16905 () | 54509..55891 | + | 1383 | WP_054300628.1 | conjugal transfer protein TraH | - |
| Psal107_RS16910 () | 55893..58682 | + | 2790 | WP_054300629.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| Psal107_RS16915 () | 58690..59007 | - | 318 | WP_054300630.1 | hypothetical protein | - |
| Psal107_RS16920 () | 59090..59833 | + | 744 | WP_054300631.1 | complement resistance protein TraT | - |
| Psal107_RS16925 () | 59872..60192 | + | 321 | WP_054300632.1 | hypothetical protein | - |
| Psal107_RS16930 () | 60760..62754 | + | 1995 | WP_054300634.1 | type IV conjugative transfer system coupling protein TraD | - |
| Psal107_RS16935 () | 62754..63506 | + | 753 | WP_081007080.1 | thioredoxin domain-containing protein | - |
| Psal107_RS16940 () | 63518..63697 | + | 180 | WP_054300636.1 | hypothetical protein | - |
| Psal107_RS16945 () | 63788..69766 | + | 5979 | WP_081007081.1 | Multifunctional conjugation protein TraI | Relaxase |
| Psal107_RS16950 () | 69761..70090 | - | 330 | WP_054300638.1 | hypothetical protein | - |
| Psal107_RS16955 () | 70081..70524 | - | 444 | WP_054300639.1 | hypothetical protein | - |
| Psal107_RS16960 () | 71111..71404 | + | 294 | WP_036774899.1 | hypothetical protein | - |
| Psal107_RS16965 () | 71468..72256 | - | 789 | WP_054300640.1 | hypothetical protein | - |
| Psal107_RS16970 () | 72460..73346 | + | 887 | WP_155047025.1 | IS630 family transposase ISAcma25 | Transposase |
| Psal107_RS16975 () | 73350..73838 | - | 489 | WP_054300642.1 | DnaJ domain-containing protein | - |
| Psal107_RS16980 () | 73907..74278 | - | 372 | WP_047927049.1 | hypothetical protein | - |
| Psal107_RS16985 () | 74726..74959 | + | 234 | WP_027242580.1 | hypothetical protein | - |
| Psal107_RS16990 () | 75136..77322 | + | 2187 | WP_027242581.1 | ATP-dependent RecD-like DNA helicase | - |
| Psal107_RS16995 () | 77332..77733 | - | 402 | WP_027242582.1 | helix-turn-helix domain-containing protein | - |
| Psal107_RS17000 () | 77730..78041 | - | 312 | WP_027242583.1 | type II toxin-antitoxin system HigB family toxin | - |
| Psal107_RS17005 () | 78155..78424 | - | 270 | WP_054300643.1 | WGR domain-containing protein | - |
| Psal107_RS17010 () | 78521..80383 | + | 1863 | WP_027242576.1 | RecX family transcriptional regulator | - |
| Psal107_RS17015 () | 80417..80902 | + | 486 | WP_027242575.1 | hypothetical protein | - |
| Psal107_RS17020 () | 80913..81140 | - | 228 | Protein_83 | transposase | - |
| Psal107_RS17025 () | 81136..81312 | + | 177 | Protein_84 | IS30 family transposase ISAs2 | Transposase |
| Psal107_RS17030 () | 81309..81653 | - | 345 | WP_054300644.1 | hypothetical protein | - |
| Psal107_RS17035 () | 81762..82073 | - | 312 | WP_054300645.1 | HU family DNA-binding protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|