MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 90105 bp
Accession: NZ_CP038909 Location: 1..90105 Organism: Piscirickettsia salmonis strain Psal-009 Replicon: plasmid unnamed1
Accession: NZ_CP038909 Location: 1..90105 Organism: Piscirickettsia salmonis strain Psal-009 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Psal009_RS17465 () | 1..747 | + | 747 | WP_016211894.1 | AAA family ATPase | - |
| Psal009_RS17470 () | 748..1152 | + | 405 | WP_016211897.1 | hypothetical protein | - |
| Psal009_RS17475 () | 1246..1398 | - | 153 | Protein_2 | site-specific integrase | - |
| Psal009_RS17480 () | 1546..2361 | - | 816 | WP_081377350.1 | IS91 family transposase ISVsa9 | Transposase |
| Psal009_RS17490 () | 2992..3878 | + | 887 | WP_155046942.1 | IS630 family transposase ISAcma25 | Transposase |
| Psal009_RS17495 () | 4017..4154 | + | 138 | WP_155047273.1 | hypothetical protein | - |
| Psal009_RS17500 () | 4285..5256 | - | 972 | WP_196214178.1 | IS91 family transposase ISVsa9 | Transposase |
| Psal009_RS17505 () | 5181..5420 | - | 240 | WP_075275277.1 | transposase zinc-binding domain-containing protein | - |
| Psal009_RS17510 () | 5673..6401 | - | 729 | WP_155047272.1 | IS6 family transposase ISPsa2 | Transposase |
| Psal009_RS17515 () | 6611..7582 | - | 972 | WP_033923677.1 | IS91 family transposase ISVsa9 | Transposase |
| Psal009_RS17520 () | 7507..7746 | - | 240 | WP_075275277.1 | transposase zinc-binding domain-containing protein | - |
| Psal009_RS17525 () | 8303..8629 | - | 327 | WP_016212298.1 | hypothetical protein | - |
| Psal009_RS17530 () | 8870..9346 | + | 477 | WP_051307374.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| Psal009_RS17535 () | 9461..10578 | + | 1118 | WP_155047271.1 | IS3 family transposase ISMasp3 | Transposase |
| Psal009_RS17540 () | 10582..11088 | - | 507 | WP_129556449.1 | IS630 family transposase ISAcma25 | Transposase |
| Psal009_RS17545 () | 11103..11468 | - | 366 | WP_054300249.1 | IS630 family transposase ISTer1 | Transposase |
| Psal009_RS17550 () | 11582..12283 | - | 702 | WP_129556698.1 | IS6 family transposase ISPsa2 | Transposase |
| Psal009_RS17555 () | 12373..12963 | - | 591 | WP_016211912.1 | site-specific integrase | - |
| Psal009_RS17560 () | 13236..13496 | + | 261 | WP_032126795.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| Psal009_RS17565 () | 13500..13772 | + | 273 | WP_016211910.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| Psal009_RS17570 () | 14098..15219 | - | 1122 | WP_016211913.1 | hypothetical protein | - |
| Psal009_RS17575 () | 15652..16050 | + | 399 | WP_075273786.1 | IS30 family transposase ISMae39 | Transposase |
| Psal009_RS17585 () | 17272..17874 | + | 603 | Protein_23 | IS30 family transposase IS4351 | Transposase |
| Psal009_RS17590 () | 18211..18585 | + | 375 | WP_016212499.1 | hypothetical protein | - |
| Psal009_RS17595 () | 18593..18787 | + | 195 | Protein_25 | IS6 family transposase ISPsa2 | Transposase |
| Psal009_RS17600 () | 18790..18963 | - | 174 | WP_016212410.1 | IS3 family transposase IS1302 | Transposase |
| Psal009_RS17605 () | 19211..19660 | + | 450 | WP_016212408.1 | hypothetical protein | - |
| Psal009_RS17610 () | 19653..19817 | + | 165 | WP_016212412.1 | hypothetical protein | - |
| Psal009_RS17615 () | 20118..20744 | + | 627 | WP_059372613.1 | hypothetical protein | - |
| Psal009_RS17620 () | 20734..21036 | + | 303 | WP_075273790.1 | hypothetical protein | - |
| Psal009_RS17625 () | 21005..21424 | - | 420 | Protein_31 | IS6 family transposase ISPsa2 | Transposase |
| Psal009_RS17630 () | 21581..22552 | - | 972 | WP_196214178.1 | IS91 family transposase ISVsa9 | Transposase |
| Psal009_RS17635 () | 22477..22716 | - | 240 | WP_075275277.1 | transposase zinc-binding domain-containing protein | - |
| Psal009_RS17640 () | 22882..23193 | - | 312 | Protein_34 | IS6 family transposase ISPsa2 | Transposase |
| Psal009_RS17645 () | 23223..23447 | - | 225 | WP_054300590.1 | hypothetical protein | - |
| Psal009_RS17650 () | 23755..23955 | + | 201 | WP_129556699.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| Psal009_RS17655 () | 23949..24284 | + | 336 | WP_016211871.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| Psal009_RS17660 () | 24850..25113 | + | 264 | WP_032126138.1 | RNA-binding protein | - |
| Psal009_RS19165 () | 25668..26468 | + | 801 | WP_196214177.1 | hypothetical protein | - |
| Psal009_RS17670 () | 26606..26989 | - | 384 | WP_155046940.1 | hypothetical protein | - |
| Psal009_RS17675 () | 27194..28045 | - | 852 | WP_155066233.1 | hypothetical protein | - |
| Psal009_RS17680 () | 28163..28459 | - | 297 | WP_016212010.1 | hypothetical protein | - |
| Psal009_RS17685 () | 28476..29174 | - | 699 | WP_016212008.1 | hypothetical protein | - |
| Psal009_RS17690 () | 29212..29502 | - | 291 | WP_032126227.1 | hypothetical protein | - |
| Psal009_RS17695 () | 30429..31315 | + | 887 | WP_155047053.1 | IS630 family transposase ISAcma25 | Transposase |
| Psal009_RS17700 () | 31356..31670 | + | 315 | WP_054300520.1 | IS630 family transposase ISTer1 | Transposase |
| Psal009_RS17705 () | 31616..32191 | + | 576 | WP_075273359.1 | IS630 family transposase ISAcma25 | Transposase |
| Psal009_RS17710 () | 32242..33645 | - | 1404 | WP_016211797.1 | aldehyde dehydrogenase family protein | - |
| Psal009_RS17715 () | 33807..34865 | - | 1059 | WP_054300521.1 | acyl-CoA/acyl-ACP dehydrogenase | - |
| Psal009_RS17720 () | 35551..35745 | + | 195 | WP_016211795.1 | hypothetical protein | - |
| Psal009_RS17725 () | 35883..36869 | - | 987 | WP_036794771.1 | APC family permease | - |
| Psal009_RS17730 () | 37592..37846 | - | 255 | WP_016212044.1 | hypothetical protein | - |
| Psal009_RS17735 () | 38620..38838 | + | 219 | WP_036777801.1 | hypothetical protein | - |
| Psal009_RS17740 () | 39701..40429 | + | 729 | WP_155047052.1 | hypothetical protein | - |
| Psal009_RS17745 () | 40574..41443 | + | 870 | WP_155047051.1 | hypothetical protein | - |
| Psal009_RS17750 () | 41755..42045 | - | 291 | WP_016210130.1 | PAAR domain-containing protein | - |
| Psal009_RS17755 () | 42222..43460 | + | 1239 | WP_036777805.1 | MFS transporter | - |
| Psal009_RS17760 () | 43687..44238 | + | 552 | WP_016210137.1 | hypothetical protein | - |
| Psal009_RS17765 () | 44261..44968 | + | 708 | WP_162034403.1 | queuosine precursor transporter | - |
| Psal009_RS17770 () | 45002..46300 | + | 1299 | WP_016210141.1 | MFS transporter | - |
| Psal009_RS17775 () | 46390..47628 | - | 1239 | WP_196214161.1 | cysteine desulfurase-like protein | - |
| Psal009_RS17780 () | 47866..48213 | + | 348 | WP_016210136.1 | DUF4286 family protein | - |
| Psal009_RS17785 () | 48214..49986 | - | 1773 | WP_016210121.1 | single-stranded-DNA-specific exonuclease RecJ | - |
| Psal009_RS17790 () | 49976..50950 | - | 975 | WP_032126492.1 | hypothetical protein | - |
| Psal009_RS17795 () | 51577..52269 | + | 693 | WP_016210122.1 | hypothetical protein | - |
| Psal009_RS17800 () | 52509..53084 | - | 576 | WP_075273327.1 | IS630 family transposase ISAcma25 | Transposase |
| Psal009_RS17805 () | 53030..53395 | - | 366 | WP_032126362.1 | IS630 family transposase ISTer1 | Transposase |
| Psal009_RS17810 () | 54358..54735 | + | 378 | WP_016210140.1 | hypothetical protein | - |
| Psal009_RS17815 () | 54752..55774 | + | 1023 | WP_016210131.1 | hypothetical protein | - |
| Psal009_RS17820 () | 55809..57236 | - | 1428 | WP_036777812.1 | amino acid permease | - |
| Psal009_RS17825 () | 57949..60321 | - | 2373 | WP_129556442.1 | phosphoenolpyruvate synthase | - |
| Psal009_RS17830 () | 60394..61212 | + | 819 | WP_016210132.1 | kinase/pyrophosphorylase | - |
| Psal009_RS17835 () | 61579..61842 | + | 264 | WP_016210128.1 | hypothetical protein | - |
| Psal009_RS17840 () | 61936..62220 | + | 285 | WP_036777815.1 | hypothetical protein | - |
| Psal009_RS17845 () | 62224..62961 | + | 738 | WP_155047050.1 | hypothetical protein | - |
| Psal009_RS17850 () | 63014..63589 | - | 576 | WP_075273298.1 | IS630 family transposase ISAcma25 | Transposase |
| Psal009_RS17855 () | 63535..63702 | - | 168 | WP_155046705.1 | IS630 family transposase ISTer1 | Transposase |
| Psal009_RS17860 () | 63943..64188 | - | 246 | WP_054300397.1 | IS630 family transposase ISTer1 | Transposase |
| Psal009_RS19170 () | 64383..64559 | + | 177 | WP_016212130.1 | hypothetical protein | - |
| Psal009_RS17865 () | 64594..65478 | - | 885 | WP_032126495.1 | N-acetylneuraminate lyase | - |
| Psal009_RS17870 () | 65569..66315 | - | 747 | WP_016212128.1 | solute symporter family protein | - |
| Psal009_RS17875 () | 66543..66734 | - | 192 | Protein_82 | N-acetylmannosamine-6-phosphate 2-epimerase | - |
| Psal009_RS17880 () | 67229..68020 | - | 792 | WP_016210870.1 | 3-hydroxybutyrate dehydrogenase | - |
| Psal009_RS17885 () | 68172..68417 | - | 246 | WP_016210862.1 | hypothetical protein | - |
| Psal009_RS17890 () | 68569..68799 | + | 231 | WP_016210861.1 | hypothetical protein | - |
| Psal009_RS17895 () | 68825..69604 | - | 780 | WP_036778898.1 | TatD family hydrolase | - |
| Psal009_RS17900 () | 69636..69935 | - | 300 | WP_016210868.1 | hypothetical protein | VF |
| Psal009_RS17905 () | 69932..70897 | - | 966 | WP_032126490.1 | DNA polymerase III subunit delta' | - |
| Psal009_RS17910 () | 71246..72472 | + | 1227 | WP_129556441.1 | MFS transporter | - |
| Psal009_RS17915 () | 73200..74810 | + | 1611 | WP_016210857.1 | hypothetical protein | - |
| Psal009_RS17920 () | 75255..75869 | + | 615 | Protein_91 | hypothetical protein | - |
| Psal009_RS17930 () | 77115..77894 | + | 780 | WP_155047276.1 | hypothetical protein | - |
| Psal009_RS17935 () | 77891..78388 | + | 498 | WP_155047275.1 | DNA polymerase | - |
| Psal009_RS17940 () | 78444..78842 | - | 399 | WP_052047108.1 | IS91 family transposase ISVsa9 | Transposase |
| Psal009_RS17945 () | 78976..79266 | + | 291 | WP_129556716.1 | phage major capsid protein | - |
| Psal009_RS17950 () | 79280..79876 | - | 597 | WP_016210655.1 | hypothetical protein | - |
| Psal009_RS19175 () | 80043..80198 | + | 156 | WP_016210656.1 | hypothetical protein | - |
| Psal009_RS17955 () | 80195..80506 | + | 312 | WP_016210663.1 | head-tail connector protein | - |
| Psal009_RS17960 () | 80503..80826 | + | 324 | WP_016210667.1 | phage head closure protein | - |
| Psal009_RS17965 () | 80819..81214 | + | 396 | WP_016210658.1 | HK97 gp10 family phage protein | - |
| Psal009_RS17970 () | 81211..81561 | + | 351 | WP_016210651.1 | hypothetical protein | - |
| Psal009_RS17975 () | 81561..81983 | + | 423 | WP_016210664.1 | hypothetical protein | - |
| Psal009_RS17980 () | 81985..82218 | + | 234 | Protein_104 | hypothetical protein | - |
| Psal009_RS17985 () | 82281..83186 | + | 906 | WP_032126790.1 | IS481 family transposase ISRhba4 | Transposase |
| Psal009_RS17990 () | 83571..83963 | + | 393 | WP_129556697.1 | hypothetical protein | - |
| Psal009_RS17995 () | 84446..85783 | + | 1338 | WP_016211776.1 | hypothetical protein | - |
| Psal009_RS18000 () | 85951..86319 | + | 369 | WP_016211775.1 | HNH endonuclease | - |
| Psal009_RS18005 () | 86421..87095 | + | 675 | WP_016211773.1 | hypothetical protein | - |
| Psal009_RS18015 () | 87682..88416 | + | 735 | WP_032126360.1 | hypothetical protein | - |
| Psal009_RS18020 () | 88539..89597 | - | 1059 | WP_016211895.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|