MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 109807 bp
Accession: NZ_CP038882 Location: 1..109807 Organism: Piscirickettsia salmonis strain Psal-003 Replicon: plasmid unnamed1
Accession: NZ_CP038882 Location: 1..109807 Organism: Piscirickettsia salmonis strain Psal-003 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Psal003_RS16285 () | 1..702 | + | 702 | WP_016212122.1 | ParA family protein | - |
| Psal003_RS16290 () | 656..1579 | + | 924 | WP_016212121.1 | ParB/RepB/Spo0J family partition protein | - |
| Psal003_RS16295 () | 1662..1969 | + | 308 | Protein_2 | IS6 family transposase ISPsa2 | Transposase |
| Psal003_RS16300 () | 2013..2378 | + | 366 | WP_032126205.1 | IS630 family transposase ISTer1 | Transposase |
| Psal003_RS16305 () | 2324..2824 | + | 501 | WP_129556705.1 | IS630 family transposase ISAcma25 | Transposase |
| Psal003_RS16310 () | 2883..3857 | + | 975 | WP_036771330.1 | IS30 family transposase ISPlu1 | Transposase |
| Psal003_RS16315 () | 4012..4292 | + | 281 | Protein_6 | IS6 family transposase ISPsa2 | Transposase |
| Psal003_RS16320 () | 4370..5452 | + | 1083 | WP_054300162.1 | IS481 family transposase ISFw3 | Transposase |
| Psal003_RS16325 () | 5488..5664 | + | 177 | Protein_8 | IS6 family transposase ISPsa2 | Transposase |
| Psal003_RS16330 () | 5817..6779 | - | 963 | WP_016212151.1 | tyrosine-type recombinase/integrase | - |
| Psal003_RS16335 () | 6803..7117 | - | 315 | WP_016212150.1 | hypothetical protein | - |
| Psal003_RS16340 () | 7174..8223 | - | 1050 | WP_033923686.1 | IS701 family transposase ISAeme11 | Transposase |
| Psal003_RS16345 () | 8332..9372 | - | 1041 | WP_016211885.1 | DNA-binding protein | - |
| Psal003_RS16350 () | 9386..10015 | - | 630 | WP_129556706.1 | hypothetical protein | - |
| Psal003_RS16355 () | 10106..10405 | - | 300 | WP_016211884.1 | nucleotidyltransferase domain-containing protein | - |
| Psal003_RS16360 () | 10402..10830 | - | 429 | WP_016211886.1 | nucleotidyltransferase substrate binding protein | - |
| Psal003_RS16365 () | 11619..12347 | - | 729 | WP_054300202.1 | IS6 family transposase ISPsa2 | Transposase |
| Psal003_RS16370 () | 12592..13500 | + | 909 | WP_032126832.1 | Chemotaxis protein CheV | VF |
| Psal003_RS16375 () | 13611..14339 | - | 729 | WP_054300202.1 | IS6 family transposase ISPsa2 | Transposase |
| Psal003_RS16380 () | 14451..14618 | - | 168 | WP_168183278.1 | hypothetical protein | - |
| Psal003_RS16385 () | 14569..15483 | + | 915 | Protein_20 | IS30 family transposase IS1655 | Transposase |
| Psal003_RS16390 () | 15532..16260 | + | 729 | WP_054300202.1 | IS6 family transposase ISPsa2 | Transposase |
| Psal003_RS16395 () | 16464..19040 | + | 2577 | WP_016211890.1 | hypothetical protein | - |
| Psal003_RS16400 () | 19446..20420 | + | 975 | WP_054300271.1 | IS30 family transposase ISPlu1 | Transposase |
| Psal003_RS16405 () | 20463..20597 | - | 135 | Protein_24 | IS3 family transposase | - |
| Psal003_RS16410 () | 20621..21349 | - | 729 | WP_075274931.1 | IS6 family transposase ISPsa2 | Transposase |
| Psal003_RS16415 () | 21419..21763 | + | 345 | Protein_26 | IS481 family transposase ISWpi2 | Transposase |
| Psal003_RS16420 () | 21793..22854 | - | 1062 | WP_016212137.1 | hypothetical protein | - |
| Psal003_RS16425 () | 22930..23175 | - | 246 | WP_016212139.1 | hypothetical protein | - |
| Psal003_RS16430 () | 23147..23761 | - | 615 | WP_051307371.1 | hypothetical protein | - |
| Psal003_RS16435 () | 23968..24486 | - | 519 | Protein_30 | IS6 family transposase ISPsa2 | Transposase |
| Psal003_RS16440 () | 24579..25553 | + | 975 | WP_075274955.1 | IS30 family transposase ISPlu1 | Transposase |
| Psal003_RS16445 () | 25584..25802 | - | 219 | Protein_32 | IS6 family transposase ISPsa2 | Transposase |
| Psal003_RS16450 () | 25913..26932 | - | 1020 | WP_129556707.1 | hypothetical protein | - |
| Psal003_RS16460 () | 28859..29131 | + | 273 | WP_032126239.1 | IS3 family transposase ISWsu1 | Transposase |
| Psal003_RS16465 () | 29143..29979 | + | 837 | WP_033923779.1 | IS3 family transposase IS1351 | Transposase |
| Psal003_RS16470 () | 30012..30743 | + | 732 | WP_075275144.1 | IS6 family transposase ISPsa2 | Transposase |
| Psal003_RS16475 () | 30841..31254 | + | 414 | WP_016212014.1 | DUF2190 family protein | - |
| Psal003_RS16480 () | 31549..31797 | + | 249 | WP_155062499.1 | hypothetical protein | - |
| Psal003_RS16490 () | 32936..33181 | + | 246 | WP_047927838.1 | hypothetical protein | - |
| Psal003_RS16495 () | 33178..33477 | + | 300 | WP_016212018.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| Psal003_RS16500 () | 33634..34329 | - | 696 | WP_016212019.1 | IS6 family transposase ISSba18 | Transposase |
| Psal003_RS16505 () | 34665..35042 | + | 378 | Protein_44 | IS6 family transposase ISPsa2 | Transposase |
| Psal003_RS18270 () | 35035..35343 | + | 309 | Protein_45 | IS91 family transposase ISVa3 | Transposase |
| Psal003_RS16510 () | 35341..35922 | + | 582 | WP_155085000.1 | IS91 family transposase ISVa3 | Transposase |
| Psal003_RS16520 () | 36111..36443 | + | 333 | WP_032126739.1 | IS91 family transposase ISEc37 | Transposase |
| Psal003_RS16525 () | 36608..36985 | + | 378 | WP_016212154.1 | IS3 family transposase ISSde6 | Transposase |
| Psal003_RS16530 () | 37292..37675 | - | 384 | WP_016212152.1 | hypothetical protein | - |
| Psal003_RS16535 () | 38145..38873 | - | 729 | WP_054300202.1 | IS6 family transposase ISPsa2 | Transposase |
| Psal003_RS16540 () | 38959..39159 | + | 201 | WP_098082839.1 | hypothetical protein | - |
| Psal003_RS16545 () | 39327..39695 | + | 369 | WP_016211775.1 | HNH endonuclease | - |
| Psal003_RS16550 () | 39797..40471 | + | 675 | WP_016211773.1 | hypothetical protein | - |
| Psal003_RS16560 () | 40924..41289 | + | 366 | WP_032126362.1 | IS630 family transposase ISTer1 | Transposase |
| Psal003_RS16565 () | 41235..41810 | + | 576 | WP_075273327.1 | IS630 family transposase ISAcma25 | Transposase |
| Psal003_RS16570 () | 42017..42751 | + | 735 | WP_032126360.1 | hypothetical protein | - |
| Psal003_RS16575 () | 42874..43932 | - | 1059 | WP_016211895.1 | hypothetical protein | - |
| Psal003_RS16580 () | 44441..45187 | + | 747 | WP_016211894.1 | AAA family ATPase | - |
| Psal003_RS16585 () | 45188..45592 | + | 405 | WP_016211897.1 | hypothetical protein | - |
| Psal003_RS16590 () | 45686..45838 | - | 153 | Protein_60 | site-specific integrase | - |
| Psal003_RS16595 () | 45986..46801 | - | 816 | WP_081007042.1 | IS91 family transposase ISVsa9 | Transposase |
| Psal003_RS16600 () | 47406..48134 | - | 729 | WP_054300202.1 | IS6 family transposase ISPsa2 | Transposase |
| Psal003_RS16605 () | 48576..48902 | - | 327 | WP_016212298.1 | hypothetical protein | - |
| Psal003_RS16610 () | 49143..49619 | + | 477 | WP_051307374.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| Psal003_RS16615 () | 49734..50027 | + | 294 | WP_075275158.1 | IS3 family transposase ISPca2 | Transposase |
| Psal003_RS16620 () | 49988..50668 | + | 681 | Protein_66 | IS3 family transposase ISMasp3 | Transposase |
| Psal003_RS16625 () | 50873..51175 | + | 303 | WP_098082791.1 | IS3 family transposase ISHor1 | Transposase |
| Psal003_RS16630 () | 51184..51885 | - | 702 | WP_129556698.1 | IS6 family transposase ISPsa2 | Transposase |
| Psal003_RS16635 () | 51975..52565 | - | 591 | WP_016211912.1 | site-specific integrase | - |
| Psal003_RS16640 () | 52838..53098 | + | 261 | WP_032126795.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| Psal003_RS16645 () | 53102..53374 | + | 273 | WP_016211910.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| Psal003_RS16650 () | 53700..54821 | - | 1122 | WP_016211913.1 | hypothetical protein | - |
| Psal003_RS16655 () | 55254..55652 | + | 399 | WP_075273786.1 | IS30 family transposase ISMae39 | Transposase |
| Psal003_RS16660 () | 55661..56218 | - | 558 | WP_081377915.1 | IS3 family transposase ISMasp3 | Transposase |
| Psal003_RS16665 () | 56363..56692 | - | 330 | WP_081377914.1 | IS3 family transposase ISLbl1 | Transposase |
| Psal003_RS16670 () | 56809..57102 | - | 294 | WP_032126637.1 | IS3 family transposase ISPca2 | Transposase |
| Psal003_RS16675 () | 57162..57764 | + | 603 | Protein_77 | IS30 family transposase IS4351 | Transposase |
| Psal003_RS16680 () | 58101..58475 | + | 375 | WP_016212499.1 | hypothetical protein | - |
| Psal003_RS16685 () | 58483..58677 | + | 195 | Protein_79 | IS6 family transposase ISPsa2 | Transposase |
| Psal003_RS16690 () | 58680..58853 | - | 174 | WP_016212410.1 | IS3 family transposase IS1302 | Transposase |
| Psal003_RS16695 () | 59101..59550 | + | 450 | WP_016212408.1 | hypothetical protein | - |
| Psal003_RS16700 () | 59543..59707 | + | 165 | WP_016212412.1 | hypothetical protein | - |
| Psal003_RS18275 () | 59912..60046 | + | 135 | Protein_83 | IS982 family transposase | - |
| Psal003_RS16710 () | 60740..61468 | - | 729 | WP_054300202.1 | IS6 family transposase ISPsa2 | Transposase |
| Psal003_RS16715 () | 61498..61722 | - | 225 | WP_054300590.1 | hypothetical protein | - |
| Psal003_RS16720 () | 62030..62230 | + | 201 | WP_129556699.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| Psal003_RS16725 () | 62224..62559 | + | 336 | WP_016211871.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| Psal003_RS16730 () | 63125..63388 | + | 264 | WP_032126138.1 | RNA-binding protein | - |
| Psal003_RS16735 () | 63943..64746 | + | 804 | WP_016211872.1 | hypothetical protein | - |
| Psal003_RS16740 () | 64867..65391 | + | 525 | WP_051307367.1 | hypothetical protein | - |
| Psal003_RS16750 () | 65816..66058 | - | 243 | WP_032126346.1 | hypothetical protein | - |
| Psal003_RS16755 () | 66125..66865 | - | 741 | WP_033923775.1 | Dihydroanticapsin 7-dehydrogenase | VF |
| Psal003_RS16760 () | 66913..67341 | - | 429 | WP_016212413.1 | hypothetical protein | - |
| Psal003_RS16765 () | 67446..67628 | + | 183 | WP_075273800.1 | IS701 family transposase ISAeme11 | Transposase |
| Psal003_RS16770 () | 67675..68403 | + | 729 | WP_017377694.1 | IS6 family transposase ISPsa2 | Transposase |
| Psal003_RS16775 () | 68607..68825 | + | 219 | WP_164997253.1 | IS5 family transposase ISFtu2 | Transposase |
| Psal003_RS16780 () | 68785..69240 | + | 456 | WP_081007004.1 | IS5 family transposase ISRel13 | Transposase |
| Psal003_RS16785 () | 69346..70407 | + | 1062 | WP_054300148.1 | IS701 family transposase ISAeme11 | Transposase |
| Psal003_RS16790 () | 70447..70950 | - | 504 | WP_080728342.1 | helix-turn-helix transcriptional regulator | - |
| Psal003_RS16795 () | 71265..71597 | - | 333 | WP_032126739.1 | IS91 family transposase ISEc37 | Transposase |
| Psal003_RS16800 () | 71844..72368 | - | 525 | WP_129556701.1 | IS91 family transposase ISVsa9 | Transposase |
| Psal003_RS16805 () | 72777..73484 | + | 708 | WP_075275159.1 | hypothetical protein | - |
| Psal003_RS16810 () | 73505..74658 | + | 1154 | WP_129556702.1 | IS3 family transposase ISMasp3 | Transposase |
| Psal003_RS16815 () | 74690..75106 | + | 417 | Protein_104 | IS6 family transposase ISPsa2 | Transposase |
| Psal003_RS16820 () | 75122..75658 | - | 537 | Protein_105 | IS481 family transposase ISWpi2 | Transposase |
| Psal003_RS16825 () | 75642..76217 | - | 576 | WP_075273327.1 | IS630 family transposase ISAcma25 | Transposase |
| Psal003_RS16830 () | 76163..76528 | - | 366 | WP_032126362.1 | IS630 family transposase ISTer1 | Transposase |
| Psal003_RS16835 () | 76594..77139 | - | 546 | Protein_108 | IS481 family transposase ISRpe1 | Transposase |
| Psal003_RS16840 () | 77249..77326 | + | 78 | Protein_109 | IS6 family transposase | - |
| Psal003_RS18280 () | 77329..77709 | - | 381 | WP_155047268.1 | IS3 family transposase IS1302 | Transposase |
| Psal003_RS16850 () | 77876..78337 | - | 462 | WP_016212398.1 | hypothetical protein | - |
| Psal003_RS16855 () | 78600..79436 | + | 837 | WP_075273816.1 | IS30 family transposase ISPlu1 | Transposase |
| Psal003_RS16860 () | 79762..80988 | + | 1227 | WP_129556717.1 | hypothetical protein | - |
| Psal003_RS16865 () | 81079..81606 | + | 528 | Protein_114 | IS6 family transposase ISPsa2 | Transposase |
| Psal003_RS16870 () | 81643..82617 | - | 975 | WP_075274955.1 | IS30 family transposase ISPlu1 | Transposase |
| Psal003_RS16875 () | 82775..83047 | + | 273 | WP_016212260.1 | hypothetical protein | - |
| Psal003_RS16880 () | 83067..83291 | + | 225 | WP_016212257.1 | hypothetical protein | - |
| Psal003_RS16885 () | 83628..83831 | + | 204 | WP_032126838.1 | hypothetical protein | - |
| Psal003_RS16890 () | 83828..83998 | + | 171 | WP_016212255.1 | hypothetical protein | - |
| Psal003_RS16895 () | 84185..85267 | - | 1083 | WP_075273820.1 | IS481 family transposase ISFw3 | Transposase |
| Psal003_RS16900 () | 85424..85924 | + | 501 | WP_075273822.1 | IS91 family transposase ISVsa9 | Transposase |
| Psal003_RS16905 () | 86026..86283 | - | 258 | WP_075274741.1 | hypothetical protein | - |
| Psal003_RS16915 () | 87566..88591 | - | 1026 | Protein_124 | IS3 family transposase ISPca2 | Transposase |
| Psal003_RS16920 () | 88788..88958 | + | 171 | WP_155046769.1 | hypothetical protein | - |
| Psal003_RS16925 () | 89288..90103 | + | 816 | WP_081377350.1 | IS91 family transposase ISVsa9 | Transposase |
| Psal003_RS16930 () | 90349..90939 | + | 591 | WP_059372616.1 | site-specific integrase | - |
| Psal003_RS16935 () | 91905..92924 | + | 1020 | WP_016211879.1 | ParA family protein | - |
| Psal003_RS16940 () | 92937..94277 | + | 1341 | WP_016211878.1 | hypothetical protein | - |
| Psal003_RS16945 () | 94574..94741 | - | 168 | WP_155046770.1 | IS3 family transposase ISXau3 | Transposase |
| Psal003_RS16950 () | 94797..95525 | + | 729 | WP_054300202.1 | IS6 family transposase ISPsa2 | Transposase |
| Psal003_RS16955 () | 95494..97182 | - | 1689 | WP_016212168.1 | hypothetical protein | - |
| Psal003_RS16960 () | 97526..98500 | + | 975 | WP_075275149.1 | IS30 family transposase ISPlu1 | Transposase |
| Psal003_RS16965 () | 98726..99214 | + | 489 | WP_129556703.1 | hypothetical protein | VF |
| Psal003_RS16970 () | 99272..100000 | + | 729 | WP_016211956.1 | hypothetical protein | - |
| Psal003_RS16975 () | 100457..101437 | + | 981 | WP_016211955.1 | hypothetical protein | - |
| Psal003_RS16980 () | 101583..102311 | - | 729 | WP_054300202.1 | IS6 family transposase ISPsa2 | Transposase |
| Psal003_RS16985 () | 102615..102794 | + | 180 | WP_032126843.1 | hypothetical protein | - |
| Psal003_RS16990 () | 103013..103309 | + | 297 | WP_032126844.1 | hypothetical protein | - |
| Psal003_RS16995 () | 103404..103865 | + | 462 | WP_016212118.1 | hypothetical protein | - |
| Psal003_RS17000 () | 104221..104631 | - | 411 | Protein_141 | IS6 family transposase ISPsa2 | Transposase |
| Psal003_RS17005 () | 104784..105758 | - | 975 | WP_075274955.1 | IS30 family transposase ISPlu1 | Transposase |
| Psal003_RS17010 () | 105850..106128 | - | 279 | Protein_143 | IS6 family transposase ISPsa2 | Transposase |
| Psal003_RS17015 () | 106208..107058 | + | 851 | Protein_144 | IS630 family transposase | - |
| Psal003_RS17020 () | 107134..108108 | + | 975 | WP_075274955.1 | IS30 family transposase ISPlu1 | Transposase |
| Psal003_RS17025 () | 108144..108599 | + | 456 | Protein_146 | IS6 family transposase ISPsa2 | Transposase |
| Psal003_RS17030 () | 108602..108931 | - | 330 | WP_129556704.1 | IS3 family transposase IS1302 | Transposase |
| Psal003_RS17035 () | 109159..109610 | - | 452 | Protein_148 | IS6 family transposase ISPsa2 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|