MGE detailed information
MGE type: IScluster/Tn MGE length: 33184 bp
Accession: NZ_CP038877 Location: 11619..44802 Organism: Piscirickettsia salmonis strain Psal-002 Replicon: plasmid unnamed1
Accession: NZ_CP038877 Location: 11619..44802 Organism: Piscirickettsia salmonis strain Psal-002 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Psal002_RS16375 () | 6803..7117 | - | 315 | WP_016212150.1 | hypothetical protein | - |
| Psal002_RS16380 () | 7174..8223 | - | 1050 | WP_033923686.1 | transposase | - |
| Psal002_RS16385 () | 8332..9372 | - | 1041 | WP_016211885.1 | DNA-binding protein | - |
| Psal002_RS16390 () | 9386..10015 | - | 630 | WP_129556706.1 | hypothetical protein | - |
| Psal002_RS16395 () | 10106..10405 | - | 300 | WP_016211884.1 | nucleotidyltransferase domain-containing protein | - |
| Psal002_RS16400 () | 10402..10830 | - | 429 | WP_016211886.1 | nucleotidyltransferase substrate binding protein | - |
| Psal002_RS16405 () | 11619..12347 | - | 729 | WP_054300202.1 | IS6 family transposase ISPsa2 | Transposase |
| Psal002_RS16410 () | 12592..13500 | + | 909 | WP_032126832.1 | Chemotaxis protein CheV | VF |
| Psal002_RS16415 () | 13611..14339 | - | 729 | WP_054300202.1 | IS6 family transposase ISPsa2 | Transposase |
| Psal002_RS16420 () | 14407..14565 | - | 159 | WP_155062492.1 | hypothetical protein | - |
| Psal002_RS16425 () | 14516..15430 | + | 915 | Protein_20 | IS30 family transposase IS1655 | Transposase |
| Psal002_RS16430 () | 15479..16207 | + | 729 | WP_054300202.1 | IS6 family transposase ISPsa2 | Transposase |
| Psal002_RS16435 () | 16411..18987 | + | 2577 | WP_016211890.1 | hypothetical protein | - |
| Psal002_RS16445 () | 19393..20367 | + | 975 | WP_075274822.1 | IS30 family transposase ISPlu1 | Transposase |
| Psal002_RS16450 () | 20410..20544 | - | 135 | Protein_24 | IS3 family transposase | - |
| Psal002_RS16455 () | 20568..21296 | - | 729 | WP_075274931.1 | IS6 family transposase ISPsa2 | Transposase |
| Psal002_RS16460 () | 21366..21710 | + | 345 | Protein_26 | IS481 family transposase ISWpi2 | Transposase |
| Psal002_RS16465 () | 21740..22801 | - | 1062 | WP_016212137.1 | hypothetical protein | - |
| Psal002_RS16470 () | 22877..23122 | - | 246 | WP_016212139.1 | hypothetical protein | - |
| Psal002_RS16475 () | 23094..23708 | - | 615 | WP_051307371.1 | hypothetical protein | - |
| Psal002_RS16480 () | 23915..24433 | - | 519 | Protein_30 | IS6 family transposase ISPsa2 | Transposase |
| Psal002_RS16485 () | 24526..25500 | + | 975 | WP_075274955.1 | IS30 family transposase ISPlu1 | Transposase |
| Psal002_RS16490 () | 25531..25749 | - | 219 | Protein_32 | IS6 family transposase ISPsa2 | Transposase |
| Psal002_RS16495 () | 25860..26879 | - | 1020 | WP_129556707.1 | hypothetical protein | - |
| Psal002_RS16505 () | 28806..29078 | + | 273 | WP_032126239.1 | IS3 family transposase ISWsu1 | Transposase |
| Psal002_RS16510 () | 29090..29926 | + | 837 | WP_033923779.1 | IS3 family transposase IS1351 | Transposase |
| Psal002_RS16515 () | 29959..30690 | + | 732 | WP_075275144.1 | IS6 family transposase ISPsa2 | Transposase |
| Psal002_RS16520 () | 30788..31201 | + | 414 | WP_016212014.1 | DUF2190 family protein | - |
| Psal002_RS16525 () | 31496..31894 | + | 399 | WP_016212017.1 | hypothetical protein | - |
| Psal002_RS16530 () | 31924..32169 | + | 246 | WP_047927838.1 | hypothetical protein | - |
| Psal002_RS16535 () | 32166..32465 | + | 300 | WP_016212018.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| Psal002_RS16540 () | 32622..33317 | - | 696 | WP_016212019.1 | IS6 family transposase ISSba18 | Transposase |
| Psal002_RS16545 () | 33653..34030 | + | 378 | Protein_43 | IS6 family transposase ISPsa2 | Transposase |
| Psal002_RS18685 () | 34023..34331 | + | 309 | Protein_44 | IS91 family transposase ISVa3 | Transposase |
| Psal002_RS16550 () | 34329..34910 | + | 582 | WP_155085000.1 | IS91 family transposase ISVa3 | Transposase |
| Psal002_RS16560 () | 35099..35431 | + | 333 | WP_032126739.1 | IS91 family transposase ISEc37 | Transposase |
| Psal002_RS16565 () | 35596..35973 | + | 378 | WP_016212154.1 | IS3 family transposase ISSde6 | Transposase |
| Psal002_RS16570 () | 36280..36663 | - | 384 | WP_016212152.1 | hypothetical protein | - |
| Psal002_RS16575 () | 37133..37861 | - | 729 | WP_054300202.1 | IS6 family transposase ISPsa2 | Transposase |
| Psal002_RS16580 () | 37977..38312 | - | 336 | WP_129556708.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| Psal002_RS16585 () | 38305..38547 | - | 243 | WP_016212365.1 | antidote-toxin recognition MazE family protein | Antitoxin Detail |
| Psal002_RS16590 () | 38756..39730 | + | 975 | WP_054300271.1 | IS30 family transposase ISPlu1 | Transposase |
| Psal002_RS16595 () | 39858..40298 | + | 441 | Protein_53 | tyrosine-type recombinase/integrase | - |
| Psal002_RS16600 () | 40366..41094 | + | 729 | WP_075275142.1 | IS6 family transposase ISPsa2 | Transposase |
| Psal002_RS16605 () | 41377..43062 | + | 1686 | WP_075275141.1 | protein kinase | - |
| Psal002_RS18690 () | 43183..43914 | + | 732 | WP_016212311.1 | hypothetical protein | - |
| Psal002_RS16620 () | 44068..44802 | - | 735 | WP_075275140.1 | IS6 family transposase ISPsa2 | Transposase |
| Psal002_RS16625 () | 45287..45442 | + | 156 | Protein_58 | transposase | - |
| Psal002_RS16630 () | 45429..45659 | + | 231 | WP_075275139.1 | hypothetical protein | - |
| Psal002_RS16635 () | 46000..46218 | + | 219 | WP_016212407.1 | transposase | - |
| Psal002_RS16640 () | 46274..46507 | + | 234 | WP_016212404.1 | hypothetical protein | - |
| Psal002_RS16645 () | 46628..47071 | + | 444 | WP_032126756.1 | hypothetical protein | - |
| Psal002_RS16650 () | 47216..47524 | + | 309 | WP_075275138.1 | hypothetical protein | - |
| Psal002_RS16655 () | 47756..49390 | + | 1635 | WP_155274486.1 | AAA family ATPase | - |
| Psal002_RS16660 () | 49400..49801 | - | 402 | WP_016212457.1 | helix-turn-helix domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|