MGE detailed information
MGE type: Genomic_island MGE length: 22207 bp
Accession: NZ_CP038857 Location: 3743968..3766174 Organism: Escherichia coli strain PigCaeca_2 Replicon: chromosome
Accession: NZ_CP038857 Location: 3743968..3766174 Organism: Escherichia coli strain PigCaeca_2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E5285_RS18315 () | 3739083..3739865 | + | 783 | WP_001260503.1 | flagellar biosynthetic protein FliR | - |
| E5285_RS18320 () | 3739855..3740994 | + | 1140 | WP_000785661.1 | flagellar type III secretion system protein FlhB | - |
| E5285_RS18325 () | 3740978..3743071 | + | 2094 | WP_135927377.1 | flagellar biosynthesis protein FlhA | - |
| E5285_RS18330 () | 3743295..3743792 | - | 498 | WP_000006255.1 | REP-associated tyrosine transposase RayT | - |
| E5285_RS18335 () | 3743968..3744717 | - | 750 | WP_024192679.1 | Murein DD-endopeptidase MepH | VF |
| E5285_RS18340 () | 3744927..3745187 | + | 261 | WP_000729703.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| E5285_RS18345 () | 3745190..3745468 | + | 279 | WP_000615983.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| E5285_RS18350 () | 3745624..3746364 | + | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
| E5285_RS18355 () | 3746335..3747102 | - | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| E5285_RS18360 () | 3747308..3747886 | - | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| E5285_RS18365 () | 3748126..3750570 | + | 2445 | WP_000973083.1 | Acyl-coenzyme A dehydrogenase | VF |
| E5285_RS18370 () | 3750613..3751059 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| E5285_RS18375 () | 3751240..3752010 | + | 771 | WP_001118036.1 | 2-oxoglutaramate amidase | - |
| E5285_RS18380 () | 3752051..3753187 | - | 1137 | WP_032227780.1 | ISAs1 family transposase ISEc1 | Transposase |
| E5285_RS18385 () | 3753618..3754010 | - | 393 | WP_001101839.1 | hypothetical protein | - |
| E5285_RS18390 () | 3753988..3757323 | - | 3336 | Protein_3566 | Protein RhsD | VF |
| E5285_RS18395 () | 3757322..3758626 | + | 1305 | Protein_3567 | hypothetical protein | VF |
| E5285_RS18400 () | 3758637..3759989 | + | 1353 | WP_001087741.1 | hypothetical protein | VF |
| E5285_RS18405 () | 3760013..3760495 | + | 483 | WP_001284199.1 | Major exported protein | VF |
| E5285_RS18410 () | 3760539..3761453 | + | 915 | WP_000908057.1 | hypothetical protein | - |
| E5285_RS18415 () | 3761463..3761942 | + | 480 | WP_016241900.1 | hypothetical protein | - |
| E5285_RS18420 () | 3762079..3762864 | - | 786 | WP_001053628.1 | hypothetical protein | - |
| E5285_RS18430 () | 3763403..3764134 | - | 732 | WP_001300756.1 | DNA polymerase III subunit epsilon | - |
| E5285_RS18435 () | 3764199..3764666 | + | 468 | WP_000917883.1 | ribonuclease HI | - |
| E5285_RS18440 () | 3764663..3765385 | - | 723 | WP_001297210.1 | class I SAM-dependent methyltransferase | - |
| E5285_RS18445 () | 3765419..3766174 | + | 756 | WP_001052717.1 | hydroxyacylglutathione hydrolase | - |
| E5285_RS18450 () | 3766246..3767604 | + | 1359 | WP_000644685.1 | murein transglycosylase D | - |
| E5285_RS18455 () | 3767652..3768248 | - | 597 | Protein_3578 | methyltransferase domain-containing protein | - |
| E5285_RS18460 () | 3768279..3769079 | - | 801 | WP_001230983.1 | endonuclease/exonuclease/phosphatase family protein | - |
| E5285_RS18465 () | 3769320..3770234 | + | 915 | WP_000648577.1 | LysR family transcriptional regulator | - |
| E5285_RS18470 () | 3770231..3771034 | - | 804 | WP_000997050.1 | 2,5-didehydrogluconate reductase DkgB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|