MGE detailed information
MGE type: Genomic_island MGE length: 37255 bp
Accession: NZ_CP038857 Location: 2316011..2353265 Organism: Escherichia coli strain PigCaeca_2 Replicon: chromosome
Accession: NZ_CP038857 Location: 2316011..2353265 Organism: Escherichia coli strain PigCaeca_2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E5285_RS11275 () | 2316011..2316277 | + | 267 | WP_001301023.1 | type II toxin-antitoxin system antitoxin HipB | Antitoxin Detail |
| E5285_RS11280 () | 2316277..2317599 | + | 1323 | WP_001125439.1 | type II toxin-antitoxin system serine/threonine protein kinase toxin HipA | Toxin Detail |
| E5285_RS11285 () | 2317847..2319241 | + | 1395 | WP_001543774.1 | hypothetical protein ; Integrase | Integrase |
| E5285_RS11290 () | 2319228..2320793 | + | 1566 | WP_032164001.1 | hypothetical protein ; Integrase | Integrase |
| E5285_RS11295 () | 2320777..2323143 | + | 2367 | WP_000788503.1 | hypothetical protein ; Integrase | Integrase |
| E5285_RS11300 () | 2323143..2323577 | + | 435 | WP_001214175.1 | hypothetical protein | - |
| E5285_RS11305 () | 2323944..2324929 | + | 986 | Protein_2190 | IS3 family transposase ISSen4 | Transposase |
| E5285_RS11310 () | 2324994..2325974 | + | 981 | WP_000019445.1 | IS5 family transposase ISKpn26 | Transposase |
| E5285_RS11315 () | 2326162..2326917 | - | 756 | WP_032164002.1 | M48 family metallopeptidase | - |
| E5285_RS11320 () | 2326914..2330198 | - | 3285 | WP_032164003.1 | type I restriction endonuclease subunit R | - |
| E5285_RS11325 () | 2330219..2331523 | - | 1305 | WP_032164004.1 | restriction endonuclease subunit S | - |
| E5285_RS11330 () | 2331513..2333036 | - | 1524 | WP_032164005.1 | type I restriction-modification system subunit M | - |
| E5285_RS11340 () | 2334173..2335048 | + | 876 | WP_001059072.1 | hypothetical protein ; Integrase | Integrase |
| E5285_RS11345 () | 2335032..2335817 | + | 786 | Protein_2197 | hypothetical protein ; Integrase | Integrase |
| E5285_RS11350 () | 2335818..2336561 | - | 744 | Protein_2198 | ATP-binding protein | - |
| E5285_RS11355 () | 2337080..2337940 | - | 861 | WP_000873341.1 | hypothetical protein | - |
| E5285_RS11360 () | 2337937..2338830 | - | 894 | WP_077816080.1 | AAA family ATPase | - |
| E5285_RS11365 () | 2338890..2339540 | - | 651 | WP_089533195.1 | hypothetical protein | - |
| E5285_RS11370 () | 2340080..2340447 | + | 368 | Protein_2202 | MFS transporter | - |
| E5285_RS11375 () | 2340481..2340573 | + | 93 | Protein_2203 | 4-carboxymuconolactone decarboxylase | - |
| E5285_RS11380 () | 2341019..2341227 | + | 209 | Protein_2204 | AraC family transcriptional regulator | - |
| E5285_RS11385 () | 2341482..2342183 | + | 702 | Protein_2205 | Outer membrane usher protein FimD | VF |
| E5285_RS11395 () | 2343517..2344044 | + | 528 | Protein_2207 | Outer membrane usher protein FimD | VF |
| E5285_RS11400 () | 2344058..2344588 | + | 531 | WP_000876770.1 | Protein FimF | VF |
| E5285_RS11405 () | 2344601..2345104 | + | 504 | WP_001556576.1 | Protein FimG | VF |
| E5285_RS11410 () | 2345164..2346078 | + | 915 | WP_000520659.1 | Type 1 fimbrin D-mannose specific adhesin | VF |
| E5285_RS11415 () | 2346412..2348691 | + | 2280 | WP_001556575.1 | acid resistance putative oxidoreductase YdeP | - |
| E5285_RS11420 () | 2348939..2349136 | + | 198 | WP_000543389.1 | two-component system connector SafA | - |
| E5285_RS11425 () | 2349211..2349972 | + | 762 | WP_001556574.1 | acid stress response transcriptional regulator YdeO | - |
| E5285_RS11430 () | 2350374..2352056 | + | 1683 | WP_001295684.1 | sulfatase | - |
| E5285_RS11435 () | 2352108..2353265 | + | 1158 | WP_001299007.1 | anaerobic sulfatase maturase | - |
| E5285_RS11440 () | 2353231..2353353 | - | 123 | WP_120795387.1 | protein YneP | - |
| E5285_RS11445 () | 2353556..2355241 | + | 1686 | WP_000628576.1 | ABC transporter ATP-binding protein/permease | - |
| E5285_RS11450 () | 2355279..2357651 | + | 2373 | WP_000832437.1 | TonB-dependent receptor plug domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|