MGE detailed information
MGE type: IScluster/Tn MGE length: 33236 bp
Accession: NZ_CP038812 Location: 11618..44853 Organism: Piscirickettsia salmonis strain Psal-001 Replicon: plasmid unnamed1
Accession: NZ_CP038812 Location: 11618..44853 Organism: Piscirickettsia salmonis strain Psal-001 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Psal001_RS16250 () | 6802..7116 | - | 315 | WP_016212150.1 | hypothetical protein | - |
| Psal001_RS16255 () | 7173..8222 | - | 1050 | WP_033923686.1 | transposase | - |
| Psal001_RS16260 () | 8331..9371 | - | 1041 | WP_016211885.1 | DNA-binding protein | - |
| Psal001_RS16265 () | 9385..10014 | - | 630 | WP_129556706.1 | hypothetical protein | - |
| Psal001_RS16270 () | 10105..10404 | - | 300 | WP_016211884.1 | nucleotidyltransferase domain-containing protein | - |
| Psal001_RS16275 () | 10401..10829 | - | 429 | WP_016211886.1 | nucleotidyltransferase substrate binding protein | - |
| Psal001_RS16280 () | 11618..12346 | - | 729 | WP_054300202.1 | IS6 family transposase ISPsa2 | Transposase |
| Psal001_RS16285 () | 12591..13499 | + | 909 | WP_032126832.1 | Chemotaxis protein CheV | VF |
| Psal001_RS16290 () | 13610..14338 | - | 729 | WP_054300202.1 | IS6 family transposase ISPsa2 | Transposase |
| Psal001_RS16295 () | 14450..14644 | - | 195 | WP_155046765.1 | hypothetical protein | - |
| Psal001_RS16300 () | 14568..15482 | + | 915 | Protein_20 | IS30 family transposase IS1655 | Transposase |
| Psal001_RS16305 () | 15531..16259 | + | 729 | WP_054300202.1 | IS6 family transposase ISPsa2 | Transposase |
| Psal001_RS16310 () | 16463..19039 | + | 2577 | WP_016211890.1 | hypothetical protein | - |
| Psal001_RS16315 () | 19264..19401 | - | 138 | WP_155046766.1 | hypothetical protein | - |
| Psal001_RS16320 () | 19445..20419 | + | 975 | WP_075274822.1 | IS30 family transposase ISPlu1 | Transposase |
| Psal001_RS16325 () | 20462..20596 | - | 135 | Protein_25 | IS3 family transposase | - |
| Psal001_RS16330 () | 20620..21348 | - | 729 | WP_075274931.1 | IS6 family transposase ISPsa2 | Transposase |
| Psal001_RS16335 () | 21418..21762 | + | 345 | Protein_27 | IS481 family transposase ISWpi2 | Transposase |
| Psal001_RS16340 () | 21792..22853 | - | 1062 | WP_016212137.1 | hypothetical protein | - |
| Psal001_RS16345 () | 22929..23174 | - | 246 | WP_016212139.1 | hypothetical protein | - |
| Psal001_RS16350 () | 23146..23760 | - | 615 | WP_051307371.1 | hypothetical protein | - |
| Psal001_RS16355 () | 23967..24485 | - | 519 | Protein_31 | IS6 family transposase ISPsa2 | Transposase |
| Psal001_RS16360 () | 24578..25552 | + | 975 | WP_075274955.1 | IS30 family transposase ISPlu1 | Transposase |
| Psal001_RS16365 () | 25583..25801 | - | 219 | Protein_33 | IS6 family transposase ISPsa2 | Transposase |
| Psal001_RS16370 () | 25912..26931 | - | 1020 | WP_129556707.1 | hypothetical protein | - |
| Psal001_RS16380 () | 28858..29130 | + | 273 | WP_032126239.1 | IS3 family transposase ISWsu1 | Transposase |
| Psal001_RS16385 () | 29142..29978 | + | 837 | WP_033923779.1 | IS3 family transposase IS1351 | Transposase |
| Psal001_RS16390 () | 30011..30742 | + | 732 | WP_075275144.1 | IS6 family transposase ISPsa2 | Transposase |
| Psal001_RS16395 () | 30840..31253 | + | 414 | WP_016212014.1 | DUF2190 family protein | - |
| Psal001_RS16400 () | 31548..31946 | + | 399 | WP_016212017.1 | hypothetical protein | - |
| Psal001_RS16405 () | 31976..32221 | + | 246 | WP_047927838.1 | hypothetical protein | - |
| Psal001_RS16410 () | 32218..32517 | + | 300 | WP_016212018.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| Psal001_RS16415 () | 32674..33369 | - | 696 | WP_016212019.1 | IS6 family transposase ISSba18 | Transposase |
| Psal001_RS16420 () | 33705..34082 | + | 378 | Protein_44 | IS6 family transposase ISPsa2 | Transposase |
| Psal001_RS16425 () | 34183..34962 | + | 780 | WP_081377351.1 | IS91 family transposase ISVa3 | Transposase |
| Psal001_RS16430 () | 35150..35482 | + | 333 | WP_032126739.1 | IS91 family transposase ISEc37 | Transposase |
| Psal001_RS16435 () | 35647..36024 | + | 378 | WP_016212154.1 | IS3 family transposase ISSde6 | Transposase |
| Psal001_RS16440 () | 36331..36714 | - | 384 | WP_016212152.1 | hypothetical protein | - |
| Psal001_RS16445 () | 37184..37912 | - | 729 | WP_054300202.1 | IS6 family transposase ISPsa2 | Transposase |
| Psal001_RS16450 () | 38028..38363 | - | 336 | WP_129556708.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| Psal001_RS16455 () | 38356..38598 | - | 243 | WP_016212365.1 | antidote-toxin recognition MazE family protein | Antitoxin Detail |
| Psal001_RS16460 () | 38807..39781 | + | 975 | WP_054300271.1 | IS30 family transposase ISPlu1 | Transposase |
| Psal001_RS16465 () | 39909..40349 | + | 441 | Protein_53 | tyrosine-type recombinase/integrase | - |
| Psal001_RS16470 () | 40417..41145 | + | 729 | WP_075275142.1 | IS6 family transposase ISPsa2 | Transposase |
| Psal001_RS16475 () | 41428..43113 | + | 1686 | WP_075275141.1 | protein kinase | - |
| Psal001_RS18485 () | 43234..43965 | + | 732 | WP_016212311.1 | hypothetical protein | - |
| Psal001_RS16490 () | 44119..44853 | - | 735 | WP_075275140.1 | IS6 family transposase ISPsa2 | Transposase |
| Psal001_RS16495 () | 45338..45493 | + | 156 | Protein_58 | transposase | - |
| Psal001_RS16500 () | 45480..45710 | + | 231 | WP_075275139.1 | hypothetical protein | - |
| Psal001_RS16505 () | 46062..46227 | + | 166 | Protein_60 | transposase | - |
| Psal001_RS16510 () | 46325..46558 | + | 234 | WP_016212404.1 | hypothetical protein | - |
| Psal001_RS16515 () | 46679..47122 | + | 444 | WP_032126756.1 | hypothetical protein | - |
| Psal001_RS16520 () | 47267..47575 | + | 309 | WP_075275138.1 | hypothetical protein | - |
| Psal001_RS16525 () | 47780..49441 | + | 1662 | WP_052047124.1 | AAA family ATPase | - |
| Psal001_RS16530 () | 49451..49852 | - | 402 | WP_016212457.1 | helix-turn-helix domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|