MGE detailed information
MGE type: Genomic_island MGE length: 22202 bp
Accession: NZ_CP038505 Location: 884053..906254 Organism: Escherichia coli strain 28Eco12 Replicon: chromosome
Accession: NZ_CP038505 Location: 884053..906254 Organism: Escherichia coli strain 28Eco12 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DC440_RS04330 () | 879907..880362 | + | 456 | WP_001087289.1 | type II secretion system major pseudopilin GspG | - |
| DC440_RS04335 () | 880366..880929 | + | 564 | WP_001115120.1 | type II secretion system minor pseudopilin GspH | - |
| DC440_RS04340 () | 880926..881297 | + | 372 | WP_000820073.1 | type II secretion system minor pseudopilin GspI | - |
| DC440_RS04345 () | 881294..881899 | + | 606 | WP_060624723.1 | type II secretion system minor pseudopilin GspJ | - |
| DC440_RS04350 () | 881899..882876 | + | 978 | WP_001357646.1 | type II secretion system minor pseudopilin GspK | - |
| DC440_RS04355 () | 882873..884051 | + | 1179 | WP_060624722.1 | type II secretion system protein GspL | - |
| DC440_RS04360 () | 884053..884589 | + | 537 | WP_021522237.1 | Type II secretion system protein M | VF |
| DC440_RS04365 () | 885646..886422 | + | 777 | WP_049144537.1 | Polysialic acid transport protein KpsM | VF |
| DC440_RS04370 () | 886419..887090 | + | 672 | WP_049144536.1 | Polysialic acid transport ATP-binding protein KpsT | VF |
| DC440_RS04375 () | 887101..889347 | + | 2247 | WP_049144535.1 | glycosyltransferase | - |
| DC440_RS04380 () | 889347..890102 | + | 756 | WP_049144534.1 | hypothetical protein | - |
| DC440_RS04385 () | 890111..891124 | + | 1014 | WP_000115194.1 | UDP-glucose 4-epimerase | VF |
| DC440_RS04390 () | 891277..892310 | + | 1034 | Protein_851 | IS481 family transposase | - |
| DC440_RS04395 () | 892361..893587 | - | 1227 | WP_049144533.1 | hypothetical protein | VF |
| DC440_RS04400 () | 893622..895649 | - | 2028 | WP_049144532.1 | hypothetical protein | VF |
| DC440_RS04405 () | 895646..896386 | - | 741 | WP_049144531.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | VF |
| DC440_RS04410 () | 896396..898072 | - | 1677 | WP_001606112.1 | Polysialic acid transport protein KpsD | VF |
| DC440_RS04415 () | 898096..899244 | - | 1149 | WP_060624721.1 | hypothetical protein | VF |
| DC440_RS04420 () | 899316..900299 | - | 984 | WP_001366845.1 | Arabinose 5-phosphate isomerase KpsF | VF |
| DC440_RS27020 () | 901106..901261 | - | 156 | WP_000729638.1 | IS110 family transposase ISEc32 | Transposase |
| DC440_RS04425 () | 901747..902640 | - | 894 | WP_001114681.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| DC440_RS04430 () | 902633..903028 | - | 396 | WP_000208383.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | Antitoxin Detail |
| DC440_RS04435 () | 903097..903942 | - | 846 | WP_001529401.1 | DUF4942 domain-containing protein | - |
| DC440_RS04440 () | 904027..904224 | - | 198 | WP_000839293.1 | DUF957 domain-containing protein | - |
| DC440_RS04445 () | 904241..904729 | - | 489 | WP_000761699.1 | hypothetical protein | - |
| DC440_RS04450 () | 904726..905103 | - | 378 | WP_000854689.1 | TA system toxin CbtA family protein | Toxin Detail |
| DC440_RS04455 () | 905180..905560 | - | 381 | WP_001285598.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| DC440_RS04460 () | 905610..906254 | - | 645 | WP_021566525.1 | hypothetical protein | - |
| DC440_RS04465 () | 906273..906494 | - | 222 | WP_000692300.1 | DUF987 domain-containing protein | - |
| DC440_RS04470 () | 906557..907033 | - | 477 | WP_001186774.1 | RadC family protein | - |
| DC440_RS04475 () | 907048..907533 | - | 486 | WP_000849565.1 | antirestriction protein | - |
| DC440_RS04480 () | 907588..908406 | - | 819 | WP_001234620.1 | DUF945 domain-containing protein | - |
| DC440_RS04490 () | 908507..908740 | - | 234 | WP_001119727.1 | DUF905 family protein | - |
| DC440_RS04495 () | 908819..909274 | - | 456 | WP_032232850.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|