MGE detailed information
MGE type: Genomic_island MGE length: 10759 bp
Accession: NZ_CP038505 Location: 4137655..4148413 Organism: Escherichia coli strain 28Eco12 Replicon: chromosome
Accession: NZ_CP038505 Location: 4137655..4148413 Organism: Escherichia coli strain 28Eco12 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DC440_RS20490 () | 4133001..4133783 | - | 783 | WP_001550661.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | - |
| DC440_RS20495 () | 4134099..4137308 | + | 3210 | WP_060624753.1 | RNA-directed DNA polymerase | - |
| DC440_RS20500 () | 4137469..4137609 | + | 141 | WP_001308408.1 | ash family protein | - |
| DC440_RS20505 () | 4137655..4138125 | + | 471 | WP_000201185.1 | hypothetical protein | - |
| DC440_RS27125 () | 4138122..4138224 | + | 103 | Protein_3918 | helix-turn-helix domain-containing protein | - |
| DC440_RS27130 () | 4138316..4138474 | + | 159 | Protein_3919 | integrase | - |
| DC440_RS20520 () | 4138679..4139932 | - | 1254 | WP_001550659.1 | glutamate-5-semialdehyde dehydrogenase | - |
| DC440_RS20525 () | 4139944..4141047 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| DC440_RS20530 () | 4141335..4142390 | + | 1056 | WP_000749881.1 | phosphoporin PhoE | - |
| DC440_RS20535 () | 4142429..4142830 | - | 402 | WP_000174684.1 | sigma factor-binding protein Crl | - |
| DC440_RS20540 () | 4142888..4144132 | - | 1245 | WP_000189541.1 | esterase FrsA | - |
| - () | 4143548..4143628 | - | 81 | NuclAT_11 | - | - |
| - () | 4143548..4143628 | - | 81 | NuclAT_11 | - | - |
| - () | 4143548..4143628 | - | 81 | NuclAT_11 | - | - |
| - () | 4143548..4143628 | - | 81 | NuclAT_11 | - | - |
| DC440_RS20545 () | 4144224..4144682 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| DC440_RS20550 () | 4144943..4146400 | + | 1458 | WP_001293009.1 | cytosol nonspecific dipeptidase | - |
| DC440_RS27240 () | 4146457..4146809 | - | 353 | Protein_3927 | peptide chain release factor H | - |
| DC440_RS20560 () | 4146805..4147011 | - | 207 | Protein_3928 | RtcB family protein | - |
| DC440_RS20565 () | 4147257..4147709 | - | 453 | WP_019842500.1 | GNAT family N-acetyltransferase | - |
| DC440_RS20570 () | 4147719..4148117 | - | 399 | WP_001263491.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| DC440_RS20575 () | 4148120..4148413 | - | 294 | WP_000554755.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| DC440_RS20580 () | 4148465..4149520 | - | 1056 | WP_001550655.1 | DNA polymerase IV | - |
| DC440_RS20585 () | 4149591..4150376 | - | 786 | WP_019842510.1 | putative lateral flagellar export/assembly protein LafU | - |
| DC440_RS20590 () | 4150348..4152060 | + | 1713 | Protein_3934 | flagellar biosynthesis protein FlhA | - |
| DC440_RS20595 () | 4152165..4152443 | + | 279 | WP_000598760.1 | type II toxin-antitoxin system HicA family toxin | - |
| DC440_RS20600 () | 4152436..4152792 | + | 357 | WP_001030484.1 | type II toxin-antitoxin system HicB family antitoxin | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|