MGE detailed information
MGE type: Genomic_island MGE length: 26173 bp
Accession: NZ_CP038499 Location: 1949146..1975318 Organism: Dickeya dianthicola strain LAR.16.03.LID Replicon: chromosome
Accession: NZ_CP038499 Location: 1949146..1975318 Organism: Dickeya dianthicola strain LAR.16.03.LID Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E4659_RS08975 (E4659_09105) | 1944607..1945785 | + | 1179 | WP_024105478.1 | efflux RND transporter periplasmic adaptor subunit | - |
| E4659_RS08980 (E4659_09110) | 1945796..1947322 | + | 1527 | WP_024105479.1 | DHA2 family efflux MFS transporter permease subunit | - |
| E4659_RS08985 (E4659_09115) | 1947499..1948314 | + | 816 | WP_232483795.1 | helix-turn-helix domain-containing protein | - |
| E4659_RS08990 (E4659_09120) | 1948519..1949004 | + | 486 | WP_024105481.1 | DUF2501 domain-containing protein | - |
| E4659_RS08995 (E4659_09125) | 1949146..1949736 | - | 591 | WP_024108562.1 | flavin reductase family protein | - |
| E4659_RS09000 (E4659_09130) | 1950117..1950449 | + | 333 | WP_024105483.1 | DUF1971 domain-containing protein | - |
| E4659_RS09005 (E4659_09135) | 1950460..1950798 | + | 339 | WP_024105484.1 | DUF1869 domain-containing protein | - |
| E4659_RS09010 (E4659_09140) | 1950926..1951915 | + | 990 | Protein_1770 | IS3 family transposase | - |
| E4659_RS09015 (E4659_09145) | 1952007..1952882 | + | 876 | WP_024108563.1 | DUF2971 domain-containing protein | - |
| E4659_RS09020 (E4659_09150) | 1953069..1953962 | - | 894 | WP_024108564.1 | MBL fold metallo-hydrolase | - |
| E4659_RS09025 (E4659_09155) | 1954522..1955142 | - | 621 | WP_024108565.1 | flavin reductase family protein | - |
| E4659_RS09030 (E4659_09160) | 1955368..1955781 | - | 414 | WP_024108566.1 | tautomerase family protein | - |
| E4659_RS09035 (E4659_09165) | 1955846..1956256 | - | 411 | WP_024108567.1 | hypothetical protein | - |
| E4659_RS09040 (E4659_09170) | 1956338..1957231 | - | 894 | WP_024108568.1 | Acetyl esterase | VF |
| E4659_RS09045 (E4659_09175) | 1957240..1958223 | - | 984 | WP_024108569.1 | MBL fold metallo-hydrolase | - |
| E4659_RS09050 (E4659_09180) | 1958489..1958974 | + | 486 | WP_024108570.1 | helix-turn-helix domain-containing protein | - |
| E4659_RS09055 (E4659_09185) | 1959070..1959204 | + | 135 | Protein_1779 | winged helix-turn-helix transcriptional regulator | - |
| E4659_RS09060 (E4659_09190) | 1959226..1959957 | + | 732 | Protein_1780 | zincin-like metallopeptidase domain-containing protein | - |
| E4659_RS09065 (E4659_09195) | 1960284..1960520 | + | 237 | WP_024108345.1 | type II toxin-antitoxin system CcdA family antitoxin | Antitoxin Detail |
| E4659_RS09070 (E4659_09200) | 1960523..1960837 | + | 315 | WP_024108344.1 | CcdB family protein | Toxin Detail |
| E4659_RS09075 (E4659_09205) | 1961480..1961998 | + | 519 | WP_024108343.1 | hypothetical protein | VF |
| E4659_RS09080 (E4659_09210) | 1962111..1963967 | + | 1857 | WP_024108342.1 | hypothetical protein | VF |
| E4659_RS09085 | 1963993..1964277 | + | 285 | Protein_1785 | type VI secretion system PAAR protein | - |
| E4659_RS09090 (E4659_09220) | 1964517..1965392 | + | 876 | WP_024108340.1 | DUF6402 family protein | - |
| E4659_RS09095 (E4659_09225) | 1965389..1965820 | + | 432 | WP_071599229.1 | DUF6201 family protein | - |
| E4659_RS09100 | 1965914..1965958 | + | 45 | Protein_1788 | hypothetical protein | - |
| E4659_RS09105 | 1966007..1966216 | + | 210 | WP_234003768.1 | hypothetical protein | - |
| E4659_RS09115 | 1966430..1966573 | + | 144 | WP_234003767.1 | RHS repeat domain-containing protein | - |
| E4659_RS09120 (E4659_09235) | 1966629..1966847 | + | 219 | WP_024108337.1 | hypothetical protein | - |
| E4659_RS09125 | 1966989..1967194 | + | 206 | Protein_1792 | hypothetical protein | - |
| E4659_RS09130 (E4659_09245) | 1967256..1968182 | - | 927 | WP_024108336.1 | hypothetical protein | - |
| E4659_RS09135 (E4659_09255) | 1968882..1969178 | + | 297 | WP_103415962.1 | DUF736 domain-containing protein | - |
| E4659_RS09140 (E4659_09260) | 1969291..1970574 | - | 1284 | WP_024108655.1 | hypothetical protein ; Integrase | Integrase |
| E4659_RS09150 (E4659_09270) | 1970921..1971712 | - | 792 | WP_024105495.1 | DgsA anti-repressor MtfA | - |
| E4659_RS09160 (E4659_09280) | 1972315..1972662 | + | 348 | WP_024105496.1 | DUF3168 domain-containing protein | - |
| E4659_RS09165 (E4659_09285) | 1972756..1974993 | + | 2238 | WP_024108656.1 | discoidin domain-containing protein | - |
| E4659_RS09170 (E4659_09290) | 1975151..1975318 | + | 168 | WP_024105498.1 | YqaE/Pmp3 family membrane protein | - |
| E4659_RS09175 (E4659_09295) | 1975389..1975943 | - | 555 | WP_024105499.1 | flavodoxin family protein | - |
| E4659_RS09180 (E4659_09300) | 1976225..1977277 | - | 1053 | WP_024105500.1 | glycosyltransferase | - |
| E4659_RS09185 (E4659_09305) | 1977393..1977788 | - | 396 | WP_024105501.1 | acyl-CoA thioesterase | - |
| E4659_RS09190 (E4659_09310) | 1977878..1978636 | - | 759 | WP_024105502.1 | molybdopterin-synthase adenylyltransferase MoeB | - |
| E4659_RS09195 (E4659_09315) | 1978636..1979871 | - | 1236 | WP_024105503.1 | molybdopterin molybdotransferase MoeA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|