MGE detailed information
MGE type: Genomic_island MGE length: 21219 bp
Accession: NZ_CP038419 Location: 4853197..4874415 Organism: Escherichia coli O157:H7 strain 2-6-2 Replicon: chromosome
Accession: NZ_CP038419 Location: 4853197..4874415 Organism: Escherichia coli O157:H7 strain 2-6-2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E4U89_RS24415 () | 4848923..4849465 | + | 543 | WP_000934391.1 | hypothetical protein | - |
| E4U89_RS24420 () | 4849758..4851908 | + | 2151 | WP_001298933.1 | pyruvate/proton symporter BtsT | - |
| E4U89_RS24425 () | 4851958..4852161 | + | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| E4U89_RS24430 () | 4852172..4853128 | + | 957 | WP_001297640.1 | GTPase | - |
| E4U89_RS24435 () | 4853197..4854555 | - | 1359 | WP_001304004.1 | DUF262 domain-containing protein | - |
| E4U89_RS24440 () | 4854564..4854848 | - | 285 | WP_001304005.1 | DUF262 domain-containing protein | - |
| E4U89_RS24445 () | 4855126..4857558 | + | 2433 | WP_000819018.1 | DEAD/DEAH box helicase family protein | - |
| E4U89_RS24450 () | 4857625..4859094 | + | 1470 | WP_001302468.1 | type I restriction-modification system subunit M | - |
| E4U89_RS24455 () | 4859094..4860848 | + | 1755 | WP_000110082.1 | restriction endonuclease subunit S | - |
| - () | 4860998..4861074 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 4860998..4861074 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 4860998..4861074 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 4860998..4861074 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 4860998..4861074 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4860998..4861074 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4860998..4861074 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4860998..4861074 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| E4U89_RS24460 () | 4861069..4861410 | + | 342 | WP_000132630.1 | endoribonuclease SymE | Toxin Detail |
| E4U89_RS24465 () | 4861457..4862620 | - | 1164 | WP_001304006.1 | DUF1524 domain-containing protein | - |
| E4U89_RS24470 () | 4862668..4863549 | - | 882 | WP_001304007.1 | DUF262 domain-containing protein | - |
| E4U89_RS24475 () | 4863646..4863810 | - | 165 | WP_000394274.1 | DUF1127 domain-containing protein | - |
| E4U89_RS24480 () | 4863987..4865399 | + | 1413 | WP_000199295.1 | PLP-dependent aminotransferase family protein | - |
| E4U89_RS24485 () | 4865642..4865842 | - | 201 | WP_001310455.1 | hypothetical protein | - |
| E4U89_RS24490 () | 4865817..4866599 | - | 783 | WP_001303778.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| E4U89_RS24495 () | 4867066..4868298 | + | 1233 | WP_001136983.1 | multidrug efflux MFS transporter MdtM | - |
| E4U89_RS24500 () | 4868339..4869610 | + | 1272 | WP_001037406.1 | DUF445 domain-containing protein | - |
| E4U89_RS24505 () | 4869726..4870877 | + | 1152 | WP_001302931.1 | 2-hydroxyacyl-CoA dehydratase subunit D | - |
| E4U89_RS24510 () | 4870887..4871654 | + | 768 | WP_000222489.1 | hypothetical protein | - |
| E4U89_RS24515 () | 4871651..4871917 | + | 267 | WP_000657677.1 | DUF3343 domain-containing protein | - |
| E4U89_RS24520 () | 4872229..4874415 | + | 2187 | WP_000535053.1 | T3SS effector pentapeptide repeat protein EspX6 | - |
| E4U89_RS24525 () | 4874681..4875523 | + | 843 | WP_000746206.1 | YjiK family protein | - |
| E4U89_RS24530 () | 4875591..4876769 | + | 1179 | WP_001089435.1 | MFS transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | NC_002655 | 5456776..5475497 | 0.003 | |||
| Escherichia coli O157:H7 str. Sakai | NC_002695 | 5426911..5445631 | 0.003 |