MGE detailed information
MGE type: Genomic_island MGE length: 21197 bp
Accession: NZ_CP038416 Location: 4777227..4798423 Organism: Escherichia coli O157:H7 strain 3-5-1 Replicon: chromosome
Accession: NZ_CP038416 Location: 4777227..4798423 Organism: Escherichia coli O157:H7 strain 3-5-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E4U90_RS23850 () | 4772953..4773495 | + | 543 | WP_000934391.1 | hypothetical protein | - |
| E4U90_RS23855 () | 4773788..4775938 | + | 2151 | WP_001298933.1 | pyruvate/proton symporter BtsT | - |
| E4U90_RS23860 () | 4775988..4776191 | + | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| E4U90_RS23865 () | 4776202..4777158 | + | 957 | WP_001297640.1 | GTPase | - |
| E4U90_RS23870 () | 4777227..4778585 | - | 1359 | WP_001304004.1 | DUF262 domain-containing protein | - |
| E4U90_RS23875 () | 4778594..4778878 | - | 285 | WP_001304005.1 | DUF262 domain-containing protein | - |
| E4U90_RS23880 () | 4779156..4781588 | + | 2433 | WP_000819029.1 | DEAD/DEAH box helicase family protein | - |
| E4U90_RS23885 () | 4781655..4783124 | + | 1470 | WP_001302468.1 | type I restriction-modification system subunit M | - |
| E4U90_RS23890 () | 4783124..4784878 | + | 1755 | WP_000110082.1 | restriction endonuclease subunit S | - |
| - () | 4785028..4785104 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 4785028..4785104 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 4785028..4785104 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 4785028..4785104 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 4785028..4785104 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4785028..4785104 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4785028..4785104 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4785028..4785104 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| E4U90_RS23895 () | 4785099..4785440 | + | 342 | WP_000132630.1 | endoribonuclease SymE | Toxin Detail |
| E4U90_RS23900 () | 4785487..4786650 | - | 1164 | WP_001304006.1 | DUF1524 domain-containing protein | - |
| E4U90_RS23905 () | 4786698..4787579 | - | 882 | WP_001304007.1 | DUF262 domain-containing protein | - |
| E4U90_RS23910 () | 4787676..4787840 | - | 165 | WP_000394274.1 | DUF1127 domain-containing protein | - |
| E4U90_RS23915 () | 4788017..4789429 | + | 1413 | WP_000199295.1 | PLP-dependent aminotransferase family protein | - |
| E4U90_RS23920 () | 4789672..4790604 | - | 933 | WP_000181144.1 | hypothetical protein | VF |
| E4U90_RS23925 () | 4791071..4792303 | + | 1233 | WP_001136983.1 | multidrug efflux MFS transporter MdtM | - |
| E4U90_RS23930 () | 4792344..4793615 | + | 1272 | WP_001037406.1 | DUF445 domain-containing protein | - |
| E4U90_RS23935 () | 4793731..4794882 | + | 1152 | WP_001301805.1 | 2-hydroxyacyl-CoA dehydratase subunit D | - |
| E4U90_RS23940 () | 4794892..4795659 | + | 768 | WP_000222489.1 | hypothetical protein | - |
| E4U90_RS23945 () | 4795656..4795922 | + | 267 | WP_000657677.1 | DUF3343 domain-containing protein | - |
| E4U90_RS23950 () | 4796234..4798423 | + | 2190 | WP_000535067.1 | hypothetical protein | VF |
| E4U90_RS23955 () | 4798689..4799531 | + | 843 | WP_000746206.1 | YjiK family protein | - |
| E4U90_RS23960 () | 4799599..4800777 | + | 1179 | WP_001089435.1 | MFS transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | NC_002655 | 5456776..5475497 | 0.003 | |||
| Escherichia coli O157:H7 str. Sakai | NC_002695 | 5426911..5445631 | 0.003 |