MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 92513 bp
Accession: NZ_CP038401 Location: 1..92513 Organism: Escherichia coli O157:H7 strain DEC4E Replicon: plasmid pDEC4E-1
Accession: NZ_CP038401 Location: 1..92513 Organism: Escherichia coli O157:H7 strain DEC4E Replicon: plasmid pDEC4E-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E3154_RS26305 () | 2589..3464 | + | 876 | WP_001302175.1 | Type II secretion system protein C | VF |
| E3154_RS26310 () | 3465..5432 | + | 1968 | WP_001302177.1 | Type II secretion system protein D | VF |
| E3154_RS26315 () | 5432..6937 | + | 1506 | WP_000092338.1 | Type II secretion system protein E | VF |
| E3154_RS26320 () | 6939..8162 | + | 1224 | WP_001173152.1 | Type II secretion system protein F | VF |
| E3154_RS26325 () | 8193..8627 | + | 435 | WP_001231211.1 | Type II secretion system protein G | VF |
| E3154_RS26330 () | 8624..9178 | + | 555 | WP_000082929.1 | Putative type II secretion system protein H | VF |
| E3154_RS26335 () | 9193..9540 | + | 348 | WP_000173396.1 | Type II secretion system protein I | VF |
| E3154_RS26340 () | 9537..10136 | + | 600 | WP_000082782.1 | Type II secretion system protein J | VF |
| E3154_RS26345 () | 10133..11110 | + | 978 | WP_000776550.1 | Putative type II secretion system protein K | VF |
| E3154_RS26350 () | 11149..12321 | + | 1173 | WP_071525076.1 | Type II secretion system protein L | VF |
| E3154_RS26355 () | 12308..12820 | + | 513 | WP_001004187.1 | Type II secretion system protein M | VF |
| E3154_RS26360 () | 12878..13711 | + | 834 | WP_000096786.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| E3154_RS26365 () | 13803..14204 | + | 402 | WP_000971918.1 | GspS family T2SS pilot lipoprotein variant EptO | - |
| E3154_RS26370 () | 14383..15554 | + | 1172 | Protein_14 | IS3 family transposase ISLad1 | Transposase |
| E3154_RS26375 () | 16095..16610 | + | 516 | WP_000839950.1 | Hemolysin-activating lysine-acyltransferase HlyC | VF |
| E3154_RS26380 () | 16612..19608 | + | 2997 | WP_000217739.1 | Hemolysin, chromosomal | VF |
| E3154_RS26385 () | 19658..21778 | + | 2121 | WP_000987091.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| E3154_RS26390 () | 21782..23221 | + | 1440 | WP_001213545.1 | Hemolysin secretion protein D, chromosomal | VF |
| E3154_RS26395 () | 23342..23834 | + | 493 | Protein_19 | Transcriptional repressor MprA | VF |
| E3154_RS26400 () | 23965..24195 | + | 231 | WP_010891288.1 | hypothetical protein | - |
| E3154_RS26405 () | 24316..25056 | + | 741 | WP_001066920.1 | IS91 family transposase ISMno23 | Transposase |
| E3154_RS26410 () | 25341..26318 | - | 978 | WP_000361615.1 | RepB family plasmid replication initiator protein | - |
| E3154_RS26415 () | 26726..26926 | - | 201 | WP_000708307.1 | hypothetical protein | - |
| E3154_RS26420 () | 26923..27543 | - | 621 | WP_001248529.1 | hypothetical protein | - |
| E3154_RS26425 () | 27540..28223 | - | 684 | WP_010891291.1 | DNA-binding protein | - |
| E3154_RS26430 () | 28682..28900 | + | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| E3154_RS26435 () | 28902..29207 | + | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| E3154_RS26440 () | 29208..30014 | + | 807 | WP_000016989.1 | site-specific integrase | - |
| E3154_RS26450 () | 32612..33778 | + | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| E3154_RS26455 () | 33778..34749 | + | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| E3154_RS26460 () | 35444..36346 | + | 903 | WP_000273919.1 | DUF1281 domain-containing protein | - |
| E3154_RS26465 () | 36350..36655 | + | 306 | WP_010891292.1 | hypothetical protein | - |
| E3154_RS26470 () | 36732..37415 | + | 684 | WP_000085946.1 | DNA methylase | - |
| E3154_RS26475 () | 37416..37637 | + | 222 | WP_001104869.1 | hypothetical protein | - |
| E3154_RS26480 () | 37531..38085 | + | 555 | WP_001358893.1 | DUF1380 family protein | - |
| E3154_RS26485 () | 38131..38464 | + | 334 | Protein_37 | hypothetical protein | - |
| E3154_RS26490 () | 38780..39352 | + | 573 | WP_001310284.1 | DUF1472 domain-containing protein | - |
| E3154_RS26495 () | 39448..39750 | + | 303 | WP_010891293.1 | antirestriction protein | - |
| E3154_RS26500 () | 39797..40219 | + | 423 | WP_000271685.1 | DUF1380 family protein | - |
| E3154_RS26505 () | 40216..40407 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| E3154_RS26510 () | 40526..40915 | + | 390 | WP_001303399.1 | hypothetical protein | - |
| E3154_RS26515 () | 41403..41633 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| E3154_RS26520 () | 41685..43046 | + | 1362 | WP_000199442.1 | DUF3560 domain-containing protein | - |
| E3154_RS26525 () | 43093..43656 | + | 564 | WP_001302171.1 | class I SAM-dependent methyltransferase | - |
| E3154_RS26530 () | 43742..44197 | - | 456 | WP_001358896.1 | hypothetical protein | - |
| E3154_RS26535 () | 44267..44473 | + | 207 | WP_000547965.1 | hypothetical protein | - |
| E3154_RS26540 () | 44499..44951 | + | 453 | WP_000290823.1 | single-stranded DNA-binding protein | - |
| E3154_RS26545 () | 45008..45241 | + | 234 | WP_000005995.1 | DUF905 family protein | - |
| E3154_RS26550 () | 45307..47265 | + | 1959 | WP_000117168.1 | ParB/RepB/Spo0J family partition protein | - |
| E3154_RS26555 () | 47320..47754 | + | 435 | WP_000845908.1 | conjugation system SOS inhibitor PsiB | - |
| E3154_RS26560 () | 47751..48512 | + | 762 | WP_001276250.1 | plasmid SOS inhibition protein A | - |
| - () | 48481..48679 | + | 199 | NuclAT_0 | - | - |
| - () | 48481..48679 | + | 199 | NuclAT_0 | - | - |
| - () | 48481..48679 | + | 199 | NuclAT_0 | - | - |
| - () | 48481..48679 | + | 199 | NuclAT_0 | - | - |
| E3154_RS26565 () | 48744..48902 | + | 159 | WP_001302184.1 | type I toxin-antitoxin system Hok family toxin | - |
| E3154_RS26570 () | 49036..51057 | + | 2022 | Protein_54 | hypothetical protein | Relaxase |
| E3154_RS26575 () | 51125..51556 | + | 432 | WP_001453090.1 | hypothetical protein | - |
| E3154_RS26580 () | 52186..52535 | - | 350 | Protein_56 | IS3 family transposase IS3H | Transposase |
| E3154_RS26585 () | 52629..52892 | + | 264 | Protein_57 | IS21 family transposase ISEc62 | Transposase |
| E3154_RS26590 () | 52932..53088 | + | 157 | Protein_58 | IS21 family transposase ISEc62 | Transposase |
| E3154_RS26595 () | 53049..53201 | + | 153 | Protein_59 | IS1 family transposase | - |
| E3154_RS26600 () | 53308..62817 | + | 9510 | WP_000581721.1 | Toxin B | VF |
| E3154_RS26605 () | 62891..63115 | + | 225 | Protein_61 | IS3 family transposase IS3H | Transposase |
| E3154_RS26610 () | 63108..63353 | - | 246 | Protein_62 | IS3 family transposase IS1203 | Transposase |
| E3154_RS26615 () | 63360..63611 | - | 252 | Protein_63 | IS3 family transposase IS1203 | Transposase |
| E3154_RS26620 () | 63668..65056 | + | 1389 | Protein_64 | Multifunctional conjugation protein TraI | Relaxase |
| E3154_RS26625 () | 65076..65822 | + | 747 | WP_000205762.1 | conjugal transfer pilus acetylase TraX | - |
| E3154_RS26630 () | 65881..66741 | + | 861 | WP_000704522.1 | putative protein YcjY | VF |
| E3154_RS26635 () | 66844..67404 | + | 561 | WP_000840472.1 | fertility inhibition protein FinO | - |
| E3154_RS26640 () | 67537..67749 | + | 213 | WP_001302189.1 | ANR family transcriptional regulator | - |
| E3154_RS26645 () | 67994..68455 | + | 462 | WP_001233853.1 | thermonuclease family protein | - |
| E3154_RS26650 () | 68501..68710 | + | 210 | WP_001302200.1 | hemolysin expression modulator Hha | - |
| E3154_RS26655 () | 68748..69086 | + | 339 | WP_000766796.1 | hypothetical protein | - |
| E3154_RS26660 () | 69326..69580 | + | 255 | WP_000083831.1 | replication regulatory protein RepA | - |
| E3154_RS26665 () | 69816..69890 | + | 75 | WP_001370046.1 | RepA leader peptide Tap | - |
| E3154_RS26670 () | 69883..70740 | + | 858 | WP_000130945.1 | incFII family plasmid replication initiator RepA | - |
| E3154_RS26675 () | 71653..71937 | + | 285 | WP_001178089.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| E3154_RS26680 () | 71937..72212 | + | 276 | WP_000421248.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| E3154_RS26685 () | 72307..72513 | + | 207 | WP_001105064.1 | hypothetical protein | - |
| E3154_RS26690 () | 72613..72828 | - | 216 | Protein_78 | transposase | - |
| E3154_RS26695 () | 72872..73438 | - | 567 | Protein_79 | IS3 family transposase ISSd1 | Transposase |
| E3154_RS26700 () | 73438..73854 | - | 417 | Protein_80 | transposase zinc-binding domain-containing protein | - |
| E3154_RS26705 () | 73854..74039 | - | 186 | WP_001302179.1 | hypothetical protein | - |
| E3154_RS26710 () | 74216..76426 | + | 2211 | WP_000592771.1 | Catalase-peroxidase | VF |
| E3154_RS26715 () | 76470..76859 | + | 390 | WP_001172748.1 | cytochrome b562 family protein | - |
| E3154_RS26720 () | 76916..77904 | + | 989 | Protein_84 | IS3 family transposase IS629 | Transposase |
| E3154_RS26725 () | 78085..81987 | + | 3903 | WP_001034100.1 | Serine protease EspP | VF |
| E3154_RS26730 () | 82243..82724 | - | 482 | Protein_86 | IS1 family transposase IS1N | Transposase |
| E3154_RS26735 () | 84165..84986 | + | 822 | WP_001302199.1 | polysaccharide deacetylase family protein | - |
| E3154_RS26740 () | 84986..86092 | + | 1107 | WP_000975743.1 | glycosyltransferase family 4 protein | - |
| E3154_RS26745 () | 86182..87903 | + | 1722 | WP_000550559.1 | phosphoethanolamine transferase CptA | - |
| E3154_RS26750 () | 87977..88975 | + | 999 | WP_001302181.1 | Lipid A biosynthesis myristoyltransferase | VF |
| E3154_RS26755 () | 89028..89216 | + | 189 | Protein_91 | hypothetical protein | - |
| E3154_RS26760 () | 89436..89816 | + | 381 | WP_001171540.1 | IS66 family transposase ISEc8 | Transposase |
| E3154_RS26765 () | 89813..90160 | + | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| E3154_RS26770 () | 90210..91748 | + | 1539 | WP_000998048.1 | IS66 family transposase ISEc8 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|