MGE detailed information
MGE type: Genomic_island MGE length: 21240 bp
Accession: NZ_CP038398 Location: 4664598..4685837 Organism: Escherichia coli O157:H7 strain DEC4E Replicon: chromosome
Accession: NZ_CP038398 Location: 4664598..4685837 Organism: Escherichia coli O157:H7 strain DEC4E Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E3154_RS23030 () | 4660324..4660866 | + | 543 | WP_000934391.1 | hypothetical protein | - |
| E3154_RS23035 () | 4661159..4663309 | + | 2151 | WP_001298933.1 | pyruvate/proton symporter BtsT | - |
| E3154_RS23040 () | 4663359..4663562 | + | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| E3154_RS23045 () | 4663573..4664529 | + | 957 | WP_001297640.1 | GTPase | - |
| E3154_RS23050 () | 4664598..4665956 | - | 1359 | WP_001304004.1 | DUF262 domain-containing protein | - |
| E3154_RS23055 () | 4665965..4666249 | - | 285 | WP_001304005.1 | DUF262 domain-containing protein | - |
| E3154_RS23060 () | 4666527..4668959 | + | 2433 | WP_000819018.1 | DEAD/DEAH box helicase family protein | - |
| E3154_RS23065 () | 4669026..4670495 | + | 1470 | WP_001302468.1 | type I restriction-modification system subunit M | - |
| E3154_RS23070 () | 4670495..4672249 | + | 1755 | WP_000110094.1 | restriction endonuclease subunit S | - |
| - () | 4672399..4672475 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 4672399..4672475 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 4672399..4672475 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 4672399..4672475 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 4672399..4672475 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4672399..4672475 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4672399..4672475 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4672399..4672475 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| E3154_RS23075 () | 4672470..4672811 | + | 342 | WP_000132630.1 | endoribonuclease SymE | Toxin Detail |
| E3154_RS23080 () | 4672858..4674021 | - | 1164 | WP_001304006.1 | DUF1524 domain-containing protein | - |
| E3154_RS23085 () | 4674069..4674950 | - | 882 | WP_001304007.1 | DUF262 domain-containing protein | - |
| E3154_RS23090 () | 4675047..4675211 | - | 165 | WP_000394274.1 | DUF1127 domain-containing protein | - |
| E3154_RS23095 () | 4675388..4676800 | + | 1413 | WP_000199295.1 | PLP-dependent aminotransferase family protein | - |
| E3154_RS23100 () | 4677043..4677243 | - | 201 | WP_001310455.1 | hypothetical protein | - |
| E3154_RS23105 () | 4677218..4678000 | - | 783 | WP_001303778.1 | Recombination-promoting nuclease RpnD | VF |
| E3154_RS23110 () | 4678467..4679699 | + | 1233 | WP_001136983.1 | multidrug efflux MFS transporter MdtM | - |
| E3154_RS23115 () | 4679740..4681011 | + | 1272 | WP_001037406.1 | DUF445 domain-containing protein | - |
| E3154_RS23120 () | 4681127..4682278 | + | 1152 | WP_001302931.1 | 2-hydroxyacyl-CoA dehydratase subunit D | - |
| E3154_RS23125 () | 4682288..4683055 | + | 768 | WP_000222489.1 | hypothetical protein | - |
| E3154_RS23130 () | 4683052..4683318 | + | 267 | WP_000657677.1 | DUF3343 domain-containing protein | - |
| E3154_RS23135 () | 4683630..4685837 | + | 2208 | WP_000535072.1 | hypothetical protein | VF |
| E3154_RS23140 () | 4686103..4686945 | + | 843 | WP_000746206.1 | YjiK family protein | - |
| E3154_RS23145 () | 4687013..4688191 | + | 1179 | WP_001089435.1 | MFS transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | NC_002655 | 5456776..5475497 | 0.003 | |||
| Escherichia coli O157:H7 str. Sakai | NC_002695 | 5426911..5445631 | 0.003 |