MGE detailed information
MGE type: Prophage MGE length: 47131 bp
Accession: NZ_CP038398 Location: 4277214..4324344 Organism: Escherichia coli O157:H7 strain DEC4E Replicon: chromosome
Accession: NZ_CP038398 Location: 4277214..4324344 Organism: Escherichia coli O157:H7 strain DEC4E Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E3154_RS21195 () | 4273506..4274462 | + | 957 | WP_000121344.1 | molybdenum cofactor insertion chaperone PaoD | - |
| E3154_RS21200 () | 4274641..4275768 | - | 1128 | WP_000171065.1 | MFS transporter | - |
| E3154_RS21205 () | 4275910..4276968 | - | 1059 | WP_001303808.1 | alpha/beta hydrolase | - |
| E3154_RS21210 () | 4277214..4278116 | + | 903 | WP_010917758.1 | HTH-type transcriptional regulator PgrR | VF |
| E3154_RS21215 () | 4278819..4279097 | - | 279 | WP_001301751.1 | hypothetical protein | - |
| E3154_RS21220 () | 4279264..4279986 | - | 723 | WP_000361969.1 | putative oxidoreductase | VF |
| E3154_RS21225 () | 4280085..4280984 | + | 900 | WP_000687183.1 | HTH-type transcriptional regulator PgrR | VF |
| E3154_RS21230 () | 4281660..4282616 | + | 957 | WP_000205213.1 | hypothetical protein | - |
| E3154_RS21235 () | 4282749..4285082 | - | 2334 | WP_000016225.1 | toprim domain-containing protein | - |
| E3154_RS21240 () | 4285096..4285419 | - | 324 | WP_000562750.1 | DUF5375 family protein | - |
| E3154_RS21245 () | 4285419..4285640 | - | 222 | WP_001071227.1 | hypothetical protein | - |
| E3154_RS21250 () | 4285637..4286194 | - | 558 | WP_000973389.1 | host cell division inhibitor Icd-like protein | - |
| E3154_RS21255 () | 4286191..4286451 | - | 261 | WP_001244581.1 | AlpA family transcriptional regulator | - |
| E3154_RS21260 () | 4287385..4288137 | + | 753 | WP_000154958.1 | septation initiation protein | - |
| E3154_RS21265 () | 4288134..4288685 | + | 552 | WP_000968317.1 | Polarity suppression protein | - |
| E3154_RS21270 () | 4288691..4288963 | + | 273 | WP_001185340.1 | ogr/Delta-like zinc finger family protein | - |
| E3154_RS21275 () | 4289373..4289939 | - | 567 | WP_000350115.1 | hypothetical protein | - |
| E3154_RS21280 () | 4289939..4290529 | - | 591 | WP_000647284.1 | hypothetical protein | - |
| E3154_RS21285 () | 4290560..4291192 | - | 633 | WP_000999326.1 | AAA family ATPase | - |
| E3154_RS21290 () | 4291185..4291643 | - | 459 | WP_000251694.1 | hypothetical protein | - |
| E3154_RS21295 () | 4291643..4292260 | - | 618 | WP_001303996.1 | hypothetical protein | - |
| E3154_RS21300 () | 4292233..4292649 | - | 417 | WP_000082144.1 | hypothetical protein | - |
| E3154_RS21305 () | 4292653..4293834 | - | 1182 | WP_001130487.1 | Prophage integrase IntS ; Integrase | Integrase |
| E3154_RS21310 () | 4294321..4294755 | + | 435 | Protein_4176 | IS3 family transposase ISEc48 | Transposase |
| E3154_RS21315 () | 4294797..4295540 | - | 744 | WP_000246059.1 | AraC family transcriptional regulator | - |
| E3154_RS21320 () | 4296364..4297137 | + | 774 | WP_000355475.1 | hypothetical protein | - |
| E3154_RS21325 () | 4297195..4297689 | - | 495 | Protein_4179 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| E3154_RS21330 () | 4297741..4298954 | + | 1214 | WP_162829202.1 | IS3 family transposase IS1203 | Transposase |
| E3154_RS21335 () | 4299092..4299502 | + | 411 | WP_001115552.1 | hypothetical protein | - |
| E3154_RS21345 () | 4300836..4301279 | + | 444 | WP_000344820.1 | tail assembly chaperone | - |
| E3154_RS21350 () | 4301251..4301844 | - | 594 | WP_000805544.1 | tail fiber assembly protein | - |
| E3154_RS21355 () | 4301844..4302638 | - | 795 | WP_001096963.1 | tail fiber protein | - |
| E3154_RS21360 () | 4302638..4302949 | - | 312 | WP_000788819.1 | hypothetical protein | - |
| E3154_RS21365 () | 4302946..4303868 | - | 923 | Protein_4187 | replication protein | - |
| E3154_RS21370 () | 4303901..4304194 | - | 294 | WP_000251069.1 | lambda phage CII family protein | - |
| E3154_RS21375 () | 4304313..4304513 | - | 201 | WP_000437875.1 | Cro/Cl family transcriptional regulator | - |
| E3154_RS21380 () | 4304614..4305327 | + | 714 | WP_001274756.1 | LexA family transcriptional regulator | - |
| E3154_RS21385 () | 4305455..4306222 | + | 768 | Protein_4191 | NYN domain-containing protein | - |
| E3154_RS21390 () | 4306502..4306747 | + | 246 | WP_001303805.1 | transcription antitermination protein | - |
| E3154_RS21395 () | 4306692..4307612 | + | 921 | Protein_4193 | Tyrosine recombinase XerD ; Integrase | Integrase |
| E3154_RS21405 () | 4307817..4309070 | - | 1254 | WP_000893282.1 | glutamate-5-semialdehyde dehydrogenase | - |
| E3154_RS21410 () | 4309082..4310185 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| E3154_RS21415 () | 4310473..4311108 | + | 636 | Protein_4196 | Outer membrane pore protein E | VF |
| E3154_RS21420 () | 4311163..4312376 | + | 1214 | WP_162829202.1 | IS3 family transposase IS1203 | Transposase |
| E3154_RS21425 () | 4312416..4312841 | + | 426 | Protein_4198 | porin | - |
| E3154_RS21430 () | 4312880..4313281 | - | 402 | WP_000174701.1 | sigma factor-binding protein Crl | - |
| E3154_RS21435 () | 4313339..4314583 | - | 1245 | WP_000189536.1 | esterase FrsA | - |
| - () | 4313999..4314079 | - | 81 | NuclAT_11 | - | - |
| - () | 4313999..4314079 | - | 81 | NuclAT_11 | - | - |
| - () | 4313999..4314079 | - | 81 | NuclAT_11 | - | - |
| - () | 4313999..4314079 | - | 81 | NuclAT_11 | - | - |
| E3154_RS21440 () | 4314675..4315133 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| E3154_RS21445 () | 4315394..4316851 | + | 1458 | WP_001293009.1 | cytosol nonspecific dipeptidase | - |
| E3154_RS21450 () | 4316908..4317465 | - | 558 | WP_023438539.1 | peptide chain release factor H | - |
| E3154_RS21455 () | 4317377..4317643 | - | 267 | WP_001303804.1 | hypothetical protein | - |
| E3154_RS21460 () | 4317950..4318402 | - | 453 | WP_001059871.1 | GNAT family N-acetyltransferase | - |
| E3154_RS21465 () | 4318412..4318810 | - | 399 | WP_001263495.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| E3154_RS21470 () | 4318813..4319106 | - | 294 | WP_000554757.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| E3154_RS21475 () | 4319158..4320213 | - | 1056 | WP_001226186.1 | DNA polymerase IV | - |
| E3154_RS21480 () | 4320284..4321069 | - | 786 | WP_000207556.1 | Chemotaxis protein LafU | VF |
| E3154_RS21485 () | 4321014..4322753 | + | 1740 | WP_001301901.1 | Flagellar biosynthesis protein FlhA | VF |
| E3154_RS21490 () | 4322898..4323395 | - | 498 | Protein_4211 | REP-associated tyrosine transposase RayT | - |
| E3154_RS21495 () | 4323571..4324344 | - | 774 | WP_000543891.1 | Murein DD-endopeptidase MepH | VF |
| E3154_RS21500 () | 4324530..4324790 | + | 261 | WP_000729705.1 | type II toxin-antitoxin system antitoxin DinJ | - |
| E3154_RS21505 () | 4324809..4325069 | + | 261 | WP_001303998.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | - |
| E3154_RS21510 () | 4325225..4325965 | + | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
| E3154_RS21515 () | 4325936..4326703 | - | 768 | WP_001301698.1 | class II glutamine amidotransferase | - |
| E3154_RS21520 () | 4326808..4327386 | - | 579 | WP_000284050.1 | D-sedoheptulose 7-phosphate isomerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|