MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 93180 bp
Accession: NZ_CP038379 Location: 1..93180 Organism: Escherichia coli O157:H7 strain F1273 Replicon: plasmid pF1273-1
Accession: NZ_CP038379 Location: 1..93180 Organism: Escherichia coli O157:H7 strain F1273 Replicon: plasmid pF1273-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E3159_RS28140 () | 2589..3464 | + | 876 | WP_001302175.1 | Type II secretion system protein C | VF |
| E3159_RS28145 () | 3465..5432 | + | 1968 | WP_001302177.1 | Type II secretion system protein D | VF |
| E3159_RS28150 () | 5432..6937 | + | 1506 | WP_000092338.1 | Type II secretion system protein E | VF |
| E3159_RS28155 () | 6939..8162 | + | 1224 | WP_001173152.1 | Type II secretion system protein F | VF |
| E3159_RS28160 () | 8193..8627 | + | 435 | WP_001231211.1 | Type II secretion system protein G | VF |
| E3159_RS28165 () | 8624..9178 | + | 555 | WP_000082929.1 | Putative type II secretion system protein H | VF |
| E3159_RS28170 () | 9193..9540 | + | 348 | WP_000173396.1 | Type II secretion system protein I | VF |
| E3159_RS28175 () | 9537..10136 | + | 600 | WP_000082782.1 | Type II secretion system protein J | VF |
| E3159_RS28180 () | 10133..11110 | + | 978 | WP_000776550.1 | Putative type II secretion system protein K | VF |
| E3159_RS28185 () | 11149..12321 | + | 1173 | WP_071525076.1 | Type II secretion system protein L | VF |
| E3159_RS28190 () | 12308..12820 | + | 513 | WP_001004187.1 | Type II secretion system protein M | VF |
| E3159_RS28195 () | 12878..13711 | + | 834 | WP_000096786.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| E3159_RS28200 () | 13803..14204 | + | 402 | WP_000971918.1 | GspS family T2SS pilot lipoprotein variant EptO | - |
| E3159_RS28205 () | 14383..15554 | + | 1172 | Protein_14 | IS3 family transposase ISLad1 | Transposase |
| E3159_RS28210 () | 16095..16610 | + | 516 | WP_000839950.1 | Hemolysin-activating lysine-acyltransferase HlyC | VF |
| E3159_RS28215 () | 16612..19608 | + | 2997 | WP_000217739.1 | Hemolysin, chromosomal | VF |
| E3159_RS28220 () | 19658..21778 | + | 2121 | WP_000987091.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| E3159_RS28225 () | 21782..23221 | + | 1440 | WP_001213545.1 | Hemolysin secretion protein D, chromosomal | VF |
| E3159_RS28230 () | 23342..23834 | + | 493 | Protein_19 | Transcriptional repressor MprA | VF |
| E3159_RS28235 () | 23965..24195 | + | 231 | WP_010891288.1 | hypothetical protein | - |
| E3159_RS28240 () | 24316..25056 | + | 741 | WP_001066920.1 | IS91 family transposase ISMno23 | Transposase |
| E3159_RS28245 () | 25341..26318 | - | 978 | WP_000361615.1 | RepB family plasmid replication initiator protein | - |
| E3159_RS28250 () | 26726..26926 | - | 201 | WP_000708307.1 | hypothetical protein | - |
| E3159_RS28255 () | 26923..27543 | - | 621 | WP_001248529.1 | hypothetical protein | - |
| E3159_RS28260 () | 27540..28223 | - | 684 | WP_010891291.1 | DNA-binding protein | - |
| E3159_RS28265 () | 28682..28900 | + | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| E3159_RS28270 () | 28902..29207 | + | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| E3159_RS28275 () | 29208..30014 | + | 807 | WP_000016989.1 | site-specific integrase | - |
| E3159_RS28285 () | 32026..32781 | + | 756 | WP_000852148.1 | replication initiation protein RepE | - |
| E3159_RS28290 () | 33369..34535 | + | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| E3159_RS28295 () | 34535..35506 | + | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| E3159_RS28300 () | 36115..37017 | + | 903 | WP_000273919.1 | DUF1281 domain-containing protein | - |
| E3159_RS28305 () | 37021..37326 | + | 306 | WP_010891292.1 | hypothetical protein | - |
| E3159_RS28310 () | 37403..38086 | + | 684 | WP_000085945.1 | DNA methylase | - |
| E3159_RS28315 () | 38087..38308 | + | 222 | WP_001104869.1 | hypothetical protein | - |
| E3159_RS28320 () | 38202..38756 | + | 555 | WP_001358893.1 | DUF1380 family protein | - |
| E3159_RS28325 () | 38802..39135 | + | 334 | Protein_38 | hypothetical protein | - |
| E3159_RS28330 () | 39451..40023 | + | 573 | WP_001310284.1 | DUF1472 domain-containing protein | - |
| E3159_RS28335 () | 40119..40421 | + | 303 | WP_010891293.1 | antirestriction protein | - |
| E3159_RS28340 () | 40468..40890 | + | 423 | WP_000271685.1 | DUF1380 family protein | - |
| E3159_RS28345 () | 40887..41078 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| E3159_RS28350 () | 41197..41586 | + | 390 | WP_001303399.1 | hypothetical protein | - |
| E3159_RS28355 () | 42074..42304 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| E3159_RS28360 () | 42356..43717 | + | 1362 | WP_000199442.1 | DUF3560 domain-containing protein | - |
| E3159_RS28365 () | 43764..44327 | + | 564 | WP_001302171.1 | class I SAM-dependent methyltransferase | - |
| E3159_RS28370 () | 44413..44868 | - | 456 | WP_001358896.1 | hypothetical protein | - |
| E3159_RS28375 () | 44938..45144 | + | 207 | WP_000547965.1 | hypothetical protein | - |
| E3159_RS28380 () | 45170..45622 | + | 453 | WP_000290823.1 | single-stranded DNA-binding protein | - |
| E3159_RS28385 () | 45679..45912 | + | 234 | WP_000005995.1 | DUF905 family protein | - |
| E3159_RS28390 () | 45978..47936 | + | 1959 | WP_000117168.1 | ParB/RepB/Spo0J family partition protein | - |
| E3159_RS28395 () | 47991..48425 | + | 435 | WP_000845908.1 | conjugation system SOS inhibitor PsiB | - |
| E3159_RS28400 () | 48422..49183 | + | 762 | WP_001276250.1 | plasmid SOS inhibition protein A | - |
| - () | 49152..49350 | + | 199 | NuclAT_0 | - | - |
| - () | 49152..49350 | + | 199 | NuclAT_0 | - | - |
| - () | 49152..49350 | + | 199 | NuclAT_0 | - | - |
| - () | 49152..49350 | + | 199 | NuclAT_0 | - | - |
| E3159_RS28405 () | 49415..49573 | + | 159 | WP_001302184.1 | type I toxin-antitoxin system Hok family toxin | - |
| E3159_RS28410 () | 49707..51728 | + | 2022 | Protein_55 | hypothetical protein | Relaxase |
| E3159_RS28415 () | 51796..52227 | + | 432 | WP_001453090.1 | hypothetical protein | - |
| E3159_RS28420 () | 52864..53213 | - | 350 | Protein_57 | IS3 family transposase IS3H | Transposase |
| E3159_RS28425 () | 53307..53570 | + | 264 | Protein_58 | IS21 family transposase ISEc62 | Transposase |
| E3159_RS28430 () | 53610..53766 | + | 157 | Protein_59 | IS21 family transposase ISEc62 | Transposase |
| E3159_RS28435 () | 53727..53879 | + | 153 | Protein_60 | IS1 family transposase | - |
| E3159_RS28440 () | 53986..63495 | + | 9510 | WP_000581719.1 | Toxin B | VF |
| E3159_RS28445 () | 63569..63793 | + | 225 | Protein_62 | IS3 family transposase IS3H | Transposase |
| E3159_RS28450 () | 63786..64031 | - | 246 | Protein_63 | IS3 family transposase IS1203 | Transposase |
| E3159_RS28455 () | 64038..64289 | - | 252 | Protein_64 | IS3 family transposase IS1203 | Transposase |
| E3159_RS28460 () | 64490..64870 | + | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| E3159_RS28465 () | 64867..65214 | + | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| E3159_RS28470 () | 65264..66802 | + | 1539 | WP_000998048.1 | IS66 family transposase ISEc8 | Transposase |
| E3159_RS28475 () | 66841..68184 | + | 1344 | Protein_68 | Multifunctional conjugation protein TraI | Relaxase |
| E3159_RS28480 () | 68204..68950 | + | 747 | WP_000205762.1 | conjugal transfer pilus acetylase TraX | - |
| E3159_RS28485 () | 69009..69869 | + | 861 | WP_000704522.1 | putative protein YcjY | VF |
| E3159_RS28490 () | 69972..70532 | + | 561 | WP_000840472.1 | fertility inhibition protein FinO | - |
| E3159_RS28495 () | 70665..70877 | + | 213 | WP_001302189.1 | ANR family transcriptional regulator | - |
| E3159_RS28500 () | 71122..71583 | + | 462 | WP_001233853.1 | thermonuclease family protein | - |
| E3159_RS28505 () | 71629..71838 | + | 210 | WP_001302200.1 | hemolysin expression modulator Hha | - |
| E3159_RS28510 () | 71876..72214 | + | 339 | WP_000766796.1 | hypothetical protein | - |
| E3159_RS28515 () | 72454..72708 | + | 255 | WP_000083831.1 | replication regulatory protein RepA | - |
| E3159_RS28520 () | 72944..73018 | + | 75 | WP_001370046.1 | RepA leader peptide Tap | - |
| E3159_RS28525 () | 73011..73868 | + | 858 | WP_000130945.1 | incFII family plasmid replication initiator RepA | - |
| E3159_RS28530 () | 74779..75063 | + | 285 | WP_001178089.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| E3159_RS28535 () | 75063..75338 | + | 276 | WP_000421248.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| E3159_RS28540 () | 75433..75639 | + | 207 | WP_001105064.1 | hypothetical protein | - |
| E3159_RS28545 () | 75739..75954 | - | 216 | Protein_82 | transposase | - |
| E3159_RS28550 () | 75998..76564 | - | 567 | Protein_83 | IS3 family transposase ISSd1 | Transposase |
| E3159_RS28555 () | 76564..76980 | - | 417 | Protein_84 | transposase zinc-binding domain-containing protein | - |
| E3159_RS28560 () | 76980..77165 | - | 186 | WP_001302179.1 | hypothetical protein | - |
| E3159_RS28565 () | 77342..79552 | + | 2211 | WP_000592771.1 | Catalase-peroxidase | VF |
| E3159_RS28570 () | 79596..79985 | + | 390 | WP_001172748.1 | cytochrome b562 family protein | - |
| E3159_RS28575 () | 80042..81030 | + | 989 | Protein_88 | IS3 family transposase IS629 | Transposase |
| E3159_RS28580 () | 81211..85113 | + | 3903 | WP_001034097.1 | Serine protease EspP | VF |
| E3159_RS28585 () | 85369..85850 | - | 482 | Protein_90 | IS1 family transposase IS1N | Transposase |
| E3159_RS28590 () | 87291..88112 | + | 822 | WP_001302199.1 | polysaccharide deacetylase family protein | - |
| E3159_RS28595 () | 88112..89218 | + | 1107 | WP_000975743.1 | glycosyltransferase family 4 protein | - |
| E3159_RS28600 () | 89308..91029 | + | 1722 | WP_000550559.1 | phosphoethanolamine transferase CptA | - |
| E3159_RS28605 () | 91103..92101 | + | 999 | WP_001302181.1 | Lipid A biosynthesis myristoyltransferase | VF |
| E3159_RS28610 () | 92154..92342 | + | 189 | Protein_95 | hypothetical protein | - |
| E3159_RS28615 () | 92446..92532 | - | 87 | Protein_96 | IS3 family transposase ISEhe3 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|