MGE detailed information
MGE type: Genomic_island MGE length: 21216 bp
Accession: NZ_CP038360 Location: 4706511..4727726 Organism: Escherichia coli O157:H7 strain F7386 Replicon: chromosome
Accession: NZ_CP038360 Location: 4706511..4727726 Organism: Escherichia coli O157:H7 strain F7386 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E4U67_RS23465 () | 4702237..4702779 | + | 543 | WP_000934391.1 | hypothetical protein | - |
| E4U67_RS23470 () | 4703072..4705222 | + | 2151 | WP_001298933.1 | pyruvate/proton symporter BtsT | - |
| E4U67_RS23475 () | 4705272..4705475 | + | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| E4U67_RS23480 () | 4705486..4706442 | + | 957 | WP_001297640.1 | GTPase | - |
| E4U67_RS23485 () | 4706511..4707869 | - | 1359 | WP_001304004.1 | DUF262 domain-containing protein | - |
| E4U67_RS23490 () | 4707878..4708162 | - | 285 | WP_001304005.1 | DUF262 domain-containing protein | - |
| E4U67_RS23495 () | 4708440..4710872 | + | 2433 | WP_000819018.1 | DEAD/DEAH box helicase family protein | - |
| E4U67_RS23500 () | 4710939..4712408 | + | 1470 | WP_001302468.1 | type I restriction-modification system subunit M | - |
| E4U67_RS23505 () | 4712408..4714162 | + | 1755 | WP_000110082.1 | restriction endonuclease subunit S | - |
| - () | 4714312..4714388 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 4714312..4714388 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 4714312..4714388 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 4714312..4714388 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 4714312..4714388 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4714312..4714388 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4714312..4714388 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4714312..4714388 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| E4U67_RS23510 () | 4714383..4714724 | + | 342 | WP_000132630.1 | endoribonuclease SymE | Toxin Detail |
| E4U67_RS23515 () | 4714771..4715934 | - | 1164 | WP_001304006.1 | DUF1524 domain-containing protein | - |
| E4U67_RS23520 () | 4715982..4716863 | - | 882 | WP_001304007.1 | DUF262 domain-containing protein | - |
| E4U67_RS23525 () | 4716960..4717124 | - | 165 | WP_000394274.1 | DUF1127 domain-containing protein | - |
| E4U67_RS23530 () | 4717301..4718713 | + | 1413 | WP_000199295.1 | PLP-dependent aminotransferase family protein | - |
| E4U67_RS23535 () | 4718956..4719156 | - | 201 | WP_001310455.1 | hypothetical protein | - |
| E4U67_RS23540 () | 4719131..4719913 | - | 783 | WP_001303778.1 | Recombination-promoting nuclease RpnD | VF |
| E4U67_RS23545 () | 4720380..4721612 | + | 1233 | WP_001136983.1 | multidrug efflux MFS transporter MdtM | - |
| E4U67_RS23550 () | 4721653..4722924 | + | 1272 | WP_001037406.1 | DUF445 domain-containing protein | - |
| E4U67_RS23555 () | 4723040..4724191 | + | 1152 | WP_001301805.1 | 2-hydroxyacyl-CoA dehydratase subunit D | - |
| E4U67_RS23560 () | 4724201..4724968 | + | 768 | WP_000222489.1 | hypothetical protein | - |
| E4U67_RS23565 () | 4724965..4725231 | + | 267 | WP_000657677.1 | DUF3343 domain-containing protein | - |
| E4U67_RS23570 () | 4725543..4727726 | + | 2184 | WP_000535062.1 | hypothetical protein | VF |
| E4U67_RS23575 () | 4727992..4728834 | + | 843 | WP_000746206.1 | YjiK family protein | - |
| E4U67_RS23580 () | 4728902..4730080 | + | 1179 | WP_001089435.1 | MFS transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | NC_002655 | 5456776..5475497 | 0.003 | |||
| Escherichia coli O157:H7 str. Sakai | NC_002695 | 5426911..5445631 | 0.003 |