MGE detailed information
MGE type: Genomic_island MGE length: 21222 bp
Accession: NZ_CP038355 Location: 4818620..4839841 Organism: Escherichia coli O157:H7 str. F8092B Replicon: chromosome
Accession: NZ_CP038355 Location: 4818620..4839841 Organism: Escherichia coli O157:H7 str. F8092B Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E4U83_RS24215 () | 4814346..4814888 | + | 543 | WP_000934391.1 | hypothetical protein | - |
| E4U83_RS24220 () | 4815181..4817331 | + | 2151 | WP_001298933.1 | pyruvate/proton symporter BtsT | - |
| E4U83_RS24225 () | 4817381..4817584 | + | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| E4U83_RS24230 () | 4817595..4818551 | + | 957 | WP_001297640.1 | GTPase | - |
| E4U83_RS24235 () | 4818620..4819978 | - | 1359 | WP_001304004.1 | DUF262 domain-containing protein | - |
| E4U83_RS24240 () | 4819987..4820271 | - | 285 | WP_001304005.1 | DUF262 domain-containing protein | - |
| E4U83_RS24245 () | 4820549..4822981 | + | 2433 | WP_000819018.1 | DEAD/DEAH box helicase family protein | - |
| E4U83_RS24250 () | 4823048..4824517 | + | 1470 | WP_001302468.1 | type I restriction-modification system subunit M | - |
| E4U83_RS24255 () | 4824517..4826271 | + | 1755 | WP_000110082.1 | restriction endonuclease subunit S | - |
| - () | 4826421..4826497 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 4826421..4826497 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 4826421..4826497 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 4826421..4826497 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 4826421..4826497 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4826421..4826497 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4826421..4826497 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4826421..4826497 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| E4U83_RS24260 () | 4826492..4826833 | + | 342 | WP_000132630.1 | endoribonuclease SymE | Toxin Detail |
| E4U83_RS24265 () | 4826880..4828043 | - | 1164 | WP_001304006.1 | DUF1524 domain-containing protein | - |
| E4U83_RS24270 () | 4828091..4828972 | - | 882 | WP_001304007.1 | DUF262 domain-containing protein | - |
| E4U83_RS24275 () | 4829069..4829233 | - | 165 | WP_000394274.1 | DUF1127 domain-containing protein | - |
| E4U83_RS24280 () | 4829410..4830822 | + | 1413 | WP_000199295.1 | PLP-dependent aminotransferase family protein | - |
| E4U83_RS24285 () | 4831065..4831265 | - | 201 | WP_001310455.1 | hypothetical protein | - |
| E4U83_RS24290 () | 4831240..4832022 | - | 783 | WP_001303778.1 | Recombination-promoting nuclease RpnD | VF |
| E4U83_RS24295 () | 4832489..4833721 | + | 1233 | WP_001136983.1 | multidrug efflux MFS transporter MdtM | - |
| E4U83_RS24300 () | 4833762..4835033 | + | 1272 | WP_001037406.1 | DUF445 domain-containing protein | - |
| E4U83_RS24305 () | 4835149..4836300 | + | 1152 | WP_001302931.1 | 2-hydroxyacyl-CoA dehydratase subunit D | - |
| E4U83_RS24310 () | 4836310..4837077 | + | 768 | WP_000222489.1 | hypothetical protein | - |
| E4U83_RS24315 () | 4837074..4837340 | + | 267 | WP_000657677.1 | DUF3343 domain-containing protein | - |
| E4U83_RS24320 () | 4837652..4839841 | + | 2190 | WP_024748492.1 | hypothetical protein | VF |
| E4U83_RS24325 () | 4840107..4840949 | + | 843 | WP_000746206.1 | YjiK family protein | - |
| E4U83_RS24330 () | 4841017..4842195 | + | 1179 | WP_001089435.1 | MFS transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | NC_002655 | 5456776..5475497 | 0.003 | |||
| Escherichia coli O157:H7 str. Sakai | NC_002695 | 5426911..5445631 | 0.003 |