MGE detailed information
MGE type: Genomic_island MGE length: 21228 bp
Accession: NZ_CP038349 Location: 4712571..4733798 Organism: Escherichia coli O157:H7 strain F8952 Replicon: chromosome
Accession: NZ_CP038349 Location: 4712571..4733798 Organism: Escherichia coli O157:H7 strain F8952 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E4U62_RS23445 () | 4708297..4708839 | + | 543 | WP_000934391.1 | hypothetical protein | - |
| E4U62_RS23450 () | 4709132..4711282 | + | 2151 | WP_001298933.1 | pyruvate/proton symporter BtsT | - |
| E4U62_RS23455 () | 4711332..4711535 | + | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| E4U62_RS23460 () | 4711546..4712502 | + | 957 | WP_001297640.1 | GTPase | - |
| E4U62_RS23465 () | 4712571..4713929 | - | 1359 | WP_001304004.1 | DUF262 domain-containing protein | - |
| E4U62_RS23470 () | 4713938..4714222 | - | 285 | WP_001304005.1 | DUF262 domain-containing protein | - |
| E4U62_RS23475 () | 4714500..4716932 | + | 2433 | WP_000819018.1 | DEAD/DEAH box helicase family protein | - |
| E4U62_RS23480 () | 4716999..4718468 | + | 1470 | WP_001302468.1 | type I restriction-modification system subunit M | - |
| E4U62_RS23485 () | 4718468..4720222 | + | 1755 | WP_000110082.1 | restriction endonuclease subunit S | - |
| - () | 4720372..4720448 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4720372..4720448 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4720372..4720448 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4720372..4720448 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4720372..4720448 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 4720372..4720448 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 4720372..4720448 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 4720372..4720448 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| E4U62_RS23490 () | 4720443..4720784 | + | 342 | WP_000132630.1 | endoribonuclease SymE | Toxin Detail |
| E4U62_RS23495 () | 4720831..4721994 | - | 1164 | WP_001304006.1 | DUF1524 domain-containing protein | - |
| E4U62_RS23500 () | 4722042..4722923 | - | 882 | WP_001304007.1 | DUF262 domain-containing protein | - |
| E4U62_RS23505 () | 4723020..4723184 | - | 165 | WP_000394274.1 | DUF1127 domain-containing protein | - |
| E4U62_RS23510 () | 4723361..4724773 | + | 1413 | WP_000199295.1 | PLP-dependent aminotransferase family protein | - |
| E4U62_RS23515 () | 4725016..4725216 | - | 201 | WP_001310455.1 | hypothetical protein | - |
| E4U62_RS23520 () | 4725191..4725973 | - | 783 | WP_001303778.1 | Recombination-promoting nuclease RpnD | VF |
| E4U62_RS23525 () | 4726440..4727672 | + | 1233 | WP_001136983.1 | multidrug efflux MFS transporter MdtM | - |
| E4U62_RS23530 () | 4727713..4728984 | + | 1272 | WP_001037406.1 | DUF445 domain-containing protein | - |
| E4U62_RS23535 () | 4729100..4730251 | + | 1152 | WP_001302771.1 | 2-hydroxyacyl-CoA dehydratase subunit D | - |
| E4U62_RS23540 () | 4730261..4731028 | + | 768 | WP_000222489.1 | hypothetical protein | - |
| E4U62_RS23545 () | 4731025..4731291 | + | 267 | WP_000657677.1 | DUF3343 domain-containing protein | - |
| E4U62_RS23550 () | 4731603..4733798 | + | 2196 | WP_000535069.1 | hypothetical protein | VF |
| E4U62_RS23555 () | 4734064..4734906 | + | 843 | WP_000746206.1 | YjiK family protein | - |
| E4U62_RS23560 () | 4734974..4736152 | + | 1179 | WP_001089435.1 | MFS transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | NC_002655 | 5456776..5475497 | 0.003 | |||
| Escherichia coli O157:H7 str. Sakai | NC_002695 | 5426911..5445631 | 0.003 |