MGE detailed information
MGE type: Prophage MGE length: 42774 bp
Accession: NZ_CP038349 Location: 4332185..4374958 Organism: Escherichia coli O157:H7 strain F8952 Replicon: chromosome
Accession: NZ_CP038349 Location: 4332185..4374958 Organism: Escherichia coli O157:H7 strain F8952 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E4U62_RS21640 () | 4328477..4329433 | + | 957 | WP_000121321.1 | molybdenum cofactor insertion chaperone PaoD | - |
| E4U62_RS21645 () | 4329612..4330739 | - | 1128 | WP_000171064.1 | MFS transporter | - |
| E4U62_RS21650 () | 4330881..4331939 | - | 1059 | WP_001303808.1 | alpha/beta hydrolase | - |
| E4U62_RS21655 () | 4332185..4333087 | + | 903 | WP_010917758.1 | HTH-type transcriptional regulator PgrR | VF |
| E4U62_RS21660 () | 4333790..4334068 | - | 279 | WP_001301751.1 | hypothetical protein | - |
| E4U62_RS21665 () | 4334235..4334957 | - | 723 | WP_000361969.1 | putative oxidoreductase | VF |
| E4U62_RS21670 () | 4335056..4335955 | + | 900 | WP_000687183.1 | HTH-type transcriptional regulator PgrR | VF |
| E4U62_RS21675 () | 4336631..4337587 | + | 957 | WP_000205213.1 | hypothetical protein | - |
| E4U62_RS21680 () | 4337720..4340053 | - | 2334 | WP_000016225.1 | toprim domain-containing protein | - |
| E4U62_RS21685 () | 4340067..4340390 | - | 324 | WP_000562750.1 | DUF5375 family protein | - |
| E4U62_RS21690 () | 4340390..4340611 | - | 222 | WP_001071227.1 | hypothetical protein | - |
| E4U62_RS21695 () | 4340608..4341165 | - | 558 | WP_000973389.1 | host cell division inhibitor Icd-like protein | - |
| E4U62_RS21700 () | 4341162..4341422 | - | 261 | WP_001244581.1 | AlpA family transcriptional regulator | - |
| E4U62_RS21705 () | 4342356..4343108 | + | 753 | WP_000154958.1 | septation initiation protein | - |
| E4U62_RS21710 () | 4343105..4343656 | + | 552 | WP_000968317.1 | Polarity suppression protein | - |
| E4U62_RS21715 () | 4343662..4343934 | + | 273 | WP_001185340.1 | ogr/Delta-like zinc finger family protein | - |
| E4U62_RS21720 () | 4344344..4344910 | - | 567 | WP_000350115.1 | hypothetical protein | - |
| E4U62_RS21725 () | 4344910..4345500 | - | 591 | WP_000647284.1 | hypothetical protein | - |
| E4U62_RS21730 () | 4345531..4346163 | - | 633 | WP_000999326.1 | AAA family ATPase | - |
| E4U62_RS21735 () | 4346156..4346614 | - | 459 | WP_000251694.1 | hypothetical protein | - |
| E4U62_RS21740 () | 4346614..4347231 | - | 618 | WP_001303996.1 | hypothetical protein | - |
| E4U62_RS21745 () | 4347204..4347620 | - | 417 | WP_000082144.1 | hypothetical protein | - |
| E4U62_RS21750 () | 4347624..4348805 | - | 1182 | WP_001130487.1 | Prophage integrase IntS ; Integrase | Integrase |
| E4U62_RS21755 () | 4349292..4349726 | + | 435 | Protein_4261 | IS3 family transposase ISEc48 | Transposase |
| E4U62_RS21760 () | 4349768..4350511 | - | 744 | WP_000246059.1 | AraC family transcriptional regulator | - |
| E4U62_RS21765 () | 4351335..4352108 | + | 774 | WP_000355475.1 | hypothetical protein | - |
| E4U62_RS21770 () | 4352166..4352720 | - | 555 | WP_000904979.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| E4U62_RS21775 () | 4352750..4353244 | + | 495 | WP_001115574.1 | hypothetical protein | - |
| E4U62_RS21780 () | 4353244..4353837 | + | 594 | WP_000805544.1 | tail fiber assembly protein | - |
| E4U62_RS21785 () | 4353809..4354252 | - | 444 | WP_000344820.1 | tail assembly chaperone | - |
| E4U62_RS21790 () | 4354273..4354668 | - | 396 | WP_000844960.1 | hypothetical protein | - |
| E4U62_RS21795 () | 4354983..4355294 | - | 312 | WP_000788819.1 | hypothetical protein | - |
| E4U62_RS21800 () | 4355291..4356213 | - | 923 | Protein_4270 | replication protein | - |
| E4U62_RS21805 () | 4356246..4356539 | - | 294 | WP_000251069.1 | lambda phage CII family protein | - |
| E4U62_RS21810 () | 4356658..4356858 | - | 201 | WP_000437875.1 | Cro/Cl family transcriptional regulator | - |
| E4U62_RS21815 () | 4356959..4357672 | + | 714 | WP_001274756.1 | LexA family transcriptional regulator | - |
| E4U62_RS21820 () | 4357800..4358189 | + | 390 | WP_000708838.1 | hypothetical protein | - |
| E4U62_RS21825 () | 4358429..4358674 | + | 246 | WP_001303805.1 | transcription antitermination protein | - |
| E4U62_RS21830 () | 4358619..4359539 | + | 921 | Protein_4276 | Tyrosine recombinase XerD ; Integrase | Integrase |
| E4U62_RS21840 () | 4359744..4360997 | - | 1254 | WP_000893282.1 | glutamate-5-semialdehyde dehydrogenase | - |
| E4U62_RS21845 () | 4361009..4362112 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| E4U62_RS21850 () | 4362400..4363455 | + | 1056 | WP_000749881.1 | phosphoporin PhoE | - |
| E4U62_RS21855 () | 4363494..4363895 | - | 402 | WP_000174701.1 | sigma factor-binding protein Crl | - |
| E4U62_RS21860 () | 4363953..4365197 | - | 1245 | WP_000189536.1 | esterase FrsA | - |
| - () | 4364613..4364693 | - | 81 | NuclAT_12 | - | - |
| - () | 4364613..4364693 | - | 81 | NuclAT_12 | - | - |
| - () | 4364613..4364693 | - | 81 | NuclAT_12 | - | - |
| - () | 4364613..4364693 | - | 81 | NuclAT_12 | - | - |
| E4U62_RS21865 () | 4365289..4365747 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| E4U62_RS21870 () | 4366008..4367465 | + | 1458 | WP_001293009.1 | cytosol nonspecific dipeptidase | - |
| E4U62_RS21875 () | 4367522..4368079 | - | 558 | WP_023438539.1 | peptide chain release factor H | - |
| E4U62_RS21880 () | 4367991..4368257 | - | 267 | WP_001303804.1 | hypothetical protein | - |
| E4U62_RS21885 () | 4368564..4369016 | - | 453 | WP_001059871.1 | GNAT family N-acetyltransferase | - |
| E4U62_RS21890 () | 4369026..4369424 | - | 399 | WP_001263495.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| E4U62_RS21895 () | 4369427..4369720 | - | 294 | WP_000554757.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| E4U62_RS21900 () | 4369772..4370827 | - | 1056 | WP_001226188.1 | DNA polymerase IV | - |
| E4U62_RS21905 () | 4370898..4371683 | - | 786 | WP_000207556.1 | Chemotaxis protein LafU | VF |
| E4U62_RS21910 () | 4371628..4373367 | + | 1740 | WP_001301901.1 | Flagellar biosynthesis protein FlhA | VF |
| E4U62_RS21915 () | 4373512..4374009 | - | 498 | Protein_4292 | REP-associated tyrosine transposase RayT | - |
| E4U62_RS21920 () | 4374185..4374958 | - | 774 | WP_000543891.1 | Murein DD-endopeptidase MepH | VF |
| E4U62_RS21925 () | 4375144..4375404 | + | 261 | WP_000729705.1 | type II toxin-antitoxin system antitoxin DinJ | - |
| E4U62_RS21930 () | 4375423..4375683 | + | 261 | WP_001303998.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | - |
| E4U62_RS21935 () | 4375839..4376579 | + | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
| E4U62_RS21940 () | 4376550..4377317 | - | 768 | WP_001301698.1 | class II glutamine amidotransferase | - |
| E4U62_RS21945 () | 4377422..4378000 | - | 579 | WP_000284050.1 | D-sedoheptulose 7-phosphate isomerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|