MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 92577 bp
Accession: NZ_CP038345 Location: 1..92577 Organism: Escherichia coli O157:H7 strain Gim1-1 Replicon: plasmid pGM11-1
Accession: NZ_CP038345 Location: 1..92577 Organism: Escherichia coli O157:H7 strain Gim1-1 Replicon: plasmid pGM11-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E4U63_RS26535 () | 2589..3464 | + | 876 | WP_001302175.1 | Type II secretion system protein C | VF |
| E4U63_RS26540 () | 3465..5432 | + | 1968 | WP_001302177.1 | Type II secretion system protein D | VF |
| E4U63_RS26545 () | 5432..6937 | + | 1506 | WP_000092338.1 | hypothetical protein | VF |
| E4U63_RS26550 () | 6939..8162 | + | 1224 | WP_001173152.1 | hypothetical protein | VF |
| E4U63_RS26555 () | 8193..8627 | + | 435 | WP_001231211.1 | Type II secretion system protein G | VF |
| E4U63_RS26560 () | 8624..9178 | + | 555 | WP_000082929.1 | Putative type II secretion system protein H | VF |
| E4U63_RS26565 () | 9193..9540 | + | 348 | WP_000173396.1 | Type II secretion system protein I | VF |
| E4U63_RS26570 () | 9537..10136 | + | 600 | WP_000082782.1 | Type II secretion system protein J | VF |
| E4U63_RS26575 () | 10133..11110 | + | 978 | WP_000776550.1 | Putative type II secretion system protein K | VF |
| E4U63_RS26580 () | 11149..12321 | + | 1173 | WP_071525076.1 | Type II secretion system protein L | VF |
| E4U63_RS26585 () | 12308..12820 | + | 513 | WP_001004187.1 | Type II secretion system protein M | VF |
| E4U63_RS26590 () | 12878..13711 | + | 834 | WP_000096786.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| E4U63_RS26595 () | 13803..14204 | + | 402 | WP_000971918.1 | GspS family T2SS pilot lipoprotein variant EptO | - |
| E4U63_RS26600 () | 14383..15554 | + | 1172 | Protein_14 | IS3 family transposase ISLad1 | Transposase |
| E4U63_RS26605 () | 16095..16610 | + | 516 | WP_000839950.1 | hypothetical protein | VF |
| E4U63_RS26610 () | 16612..19608 | + | 2997 | WP_000217739.1 | Hemolysin, chromosomal | VF |
| E4U63_RS26615 () | 19658..21778 | + | 2121 | WP_000987091.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| E4U63_RS26620 () | 21782..23221 | + | 1440 | WP_001213545.1 | hypothetical protein | VF |
| E4U63_RS26625 () | 23341..23833 | + | 493 | Protein_19 | hypothetical protein | VF |
| E4U63_RS26630 () | 23964..24194 | + | 231 | WP_010891288.1 | hypothetical protein | - |
| E4U63_RS26635 () | 24315..25055 | + | 741 | WP_001066920.1 | IS91 family transposase ISMno23 | Transposase |
| E4U63_RS26640 () | 25340..26317 | - | 978 | WP_000361615.1 | RepB family plasmid replication initiator protein | - |
| E4U63_RS26645 () | 26725..26925 | - | 201 | WP_000708307.1 | hypothetical protein | - |
| E4U63_RS26650 () | 26922..27542 | - | 621 | WP_001248529.1 | hypothetical protein | - |
| E4U63_RS26655 () | 27539..28222 | - | 684 | WP_010891291.1 | DNA-binding protein | - |
| E4U63_RS26660 () | 28681..28899 | + | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| E4U63_RS26665 () | 28901..29206 | + | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| E4U63_RS26670 () | 29207..29989 | + | 783 | WP_000016988.1 | site-specific integrase | - |
| E4U63_RS26680 () | 32396..33562 | + | 1167 | WP_000772446.1 | hypothetical protein | VF |
| E4U63_RS26685 () | 33562..34533 | + | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| E4U63_RS26690 () | 35228..36130 | + | 903 | WP_001414532.1 | DUF1281 domain-containing protein | - |
| E4U63_RS26695 () | 36134..36439 | + | 306 | WP_010891292.1 | hypothetical protein | - |
| E4U63_RS26700 () | 36516..37199 | + | 684 | WP_000085945.1 | DNA methylase | - |
| E4U63_RS26705 () | 37200..37421 | + | 222 | WP_001104869.1 | hypothetical protein | - |
| E4U63_RS26710 () | 37315..37869 | + | 555 | WP_001358893.1 | DUF1380 family protein | - |
| E4U63_RS26715 () | 37915..38248 | + | 334 | Protein_37 | hypothetical protein | - |
| E4U63_RS26720 () | 38564..38903 | + | 340 | Protein_38 | DUF1472 domain-containing protein | - |
| E4U63_RS26725 () | 38999..39301 | + | 303 | WP_010891293.1 | antirestriction protein | - |
| E4U63_RS26730 () | 39348..39770 | + | 423 | WP_000271685.1 | DUF1380 family protein | - |
| E4U63_RS26735 () | 39767..39958 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| E4U63_RS26740 () | 40077..40466 | + | 390 | WP_001303399.1 | hypothetical protein | - |
| E4U63_RS26745 () | 40954..41184 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| E4U63_RS26750 () | 41236..42597 | + | 1362 | WP_000199442.1 | DUF3560 domain-containing protein | - |
| E4U63_RS26755 () | 42644..43207 | + | 564 | WP_001302171.1 | class I SAM-dependent methyltransferase | - |
| E4U63_RS26760 () | 43293..43772 | - | 480 | WP_087498072.1 | hypothetical protein | - |
| E4U63_RS26765 () | 43842..44048 | + | 207 | WP_000547965.1 | hypothetical protein | - |
| E4U63_RS26770 () | 44074..44526 | + | 453 | WP_000290823.1 | single-stranded DNA-binding protein | - |
| E4U63_RS26775 () | 44583..44816 | + | 234 | WP_000005995.1 | DUF905 family protein | - |
| E4U63_RS26780 () | 44882..46840 | + | 1959 | WP_000117168.1 | ParB/RepB/Spo0J family partition protein | - |
| E4U63_RS26785 () | 46895..47329 | + | 435 | WP_000845908.1 | conjugation system SOS inhibitor PsiB | - |
| E4U63_RS26790 () | 47326..48087 | + | 762 | WP_001276250.1 | plasmid SOS inhibition protein A | - |
| - () | 48056..48254 | + | 199 | NuclAT_0 | - | - |
| - () | 48056..48254 | + | 199 | NuclAT_0 | - | - |
| - () | 48056..48254 | + | 199 | NuclAT_0 | - | - |
| - () | 48056..48254 | + | 199 | NuclAT_0 | - | - |
| E4U63_RS26795 () | 48319..48477 | + | 159 | WP_032169660.1 | type I toxin-antitoxin system Hok family toxin | - |
| E4U63_RS26800 () | 48611..50632 | + | 2022 | Protein_54 | hypothetical protein | Relaxase |
| E4U63_RS26805 () | 50700..51131 | + | 432 | WP_001453090.1 | hypothetical protein | - |
| E4U63_RS26810 () | 51761..52110 | - | 350 | Protein_56 | IS3 family transposase IS3H | Transposase |
| E4U63_RS26815 () | 52204..52467 | + | 264 | Protein_57 | IS21 family transposase ISEc62 | Transposase |
| E4U63_RS26820 () | 52507..52663 | + | 157 | Protein_58 | IS21 family transposase ISEc62 | Transposase |
| E4U63_RS26825 () | 52624..52776 | + | 153 | Protein_59 | IS1 family transposase | - |
| E4U63_RS26830 () | 52883..62392 | + | 9510 | WP_001509912.1 | Toxin B | VF |
| E4U63_RS26835 () | 62466..62690 | + | 225 | Protein_61 | IS3 family transposase IS3H | Transposase |
| E4U63_RS26840 () | 62758..62928 | - | 171 | Protein_62 | IS21 family transposase IS21 | Transposase |
| E4U63_RS26845 () | 62935..63186 | - | 252 | Protein_63 | IS3 family transposase IS1203 | Transposase |
| E4U63_RS26850 () | 63243..64631 | + | 1389 | Protein_64 | Multifunctional conjugation protein TraI | Relaxase |
| E4U63_RS26855 () | 64651..65397 | + | 747 | WP_000205762.1 | conjugal transfer pilus acetylase TraX | - |
| E4U63_RS26860 () | 65456..66316 | + | 861 | WP_000704522.1 | putative protein YcjY | VF |
| E4U63_RS26865 () | 66419..66979 | + | 561 | WP_000840472.1 | fertility inhibition protein FinO | - |
| E4U63_RS26870 () | 67112..67324 | + | 213 | WP_001302189.1 | ANR family transcriptional regulator | - |
| E4U63_RS26875 () | 67569..68030 | + | 462 | WP_001233853.1 | thermonuclease family protein | - |
| E4U63_RS26880 () | 68076..68285 | + | 210 | WP_001302200.1 | hemolysin expression modulator Hha | - |
| E4U63_RS26885 () | 68323..68661 | + | 339 | WP_000766796.1 | hypothetical protein | - |
| E4U63_RS26890 () | 68901..69155 | + | 255 | WP_000083831.1 | replication regulatory protein RepA | - |
| E4U63_RS26895 () | 69391..69465 | + | 75 | WP_001370046.1 | RepA leader peptide Tap | - |
| E4U63_RS26900 () | 69458..70315 | + | 858 | WP_000130945.1 | incFII family plasmid replication initiator RepA | - |
| E4U63_RS26905 () | 71227..71511 | + | 285 | WP_001178089.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| E4U63_RS26910 () | 71511..71786 | + | 276 | WP_000421248.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| E4U63_RS26915 () | 71881..72087 | + | 207 | WP_001105064.1 | hypothetical protein | - |
| E4U63_RS26920 () | 72187..72402 | - | 216 | Protein_78 | transposase | - |
| E4U63_RS26925 () | 72446..72865 | - | 420 | Protein_79 | IS3 family transposase ISSfl10 | Transposase |
| E4U63_RS26930 () | 72919..74132 | + | 1214 | WP_162829348.1 | IS3 family transposase IS629 | Transposase |
| E4U63_RS26935 () | 74305..76515 | + | 2211 | WP_000592771.1 | Catalase-peroxidase | VF |
| E4U63_RS26940 () | 76559..76948 | + | 390 | WP_001172748.1 | cytochrome b562 family protein | - |
| E4U63_RS26945 () | 77005..77993 | + | 989 | Protein_83 | IS3 family transposase IS629 | Transposase |
| E4U63_RS26950 () | 78174..82076 | + | 3903 | WP_001034100.1 | Serine protease EspP | VF |
| E4U63_RS26955 () | 82445..82825 | + | 381 | WP_001171540.1 | IS66 family transposase ISEc8 | Transposase |
| E4U63_RS26960 () | 82822..83169 | + | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| E4U63_RS26965 () | 83219..84757 | + | 1539 | WP_000998048.1 | IS66 family transposase ISEc8 | Transposase |
| E4U63_RS26970 () | 84794..85263 | - | 470 | Protein_88 | IS1 family transposase IS1N | Transposase |
| E4U63_RS26975 () | 86704..87525 | + | 822 | WP_001302199.1 | polysaccharide deacetylase family protein | - |
| E4U63_RS26980 () | 87525..88631 | + | 1107 | WP_000975743.1 | glycosyltransferase family 4 protein | - |
| E4U63_RS26985 () | 88721..90442 | + | 1722 | WP_000550559.1 | phosphoethanolamine transferase CptA | - |
| E4U63_RS26990 () | 90516..91514 | + | 999 | WP_001302181.1 | Lipid A biosynthesis myristoyltransferase | VF |
| E4U63_RS26995 () | 91567..91755 | + | 189 | Protein_93 | hypothetical protein | - |
| E4U63_RS27000 () | 91859..91945 | - | 87 | Protein_94 | IS3 family transposase ISEhe3 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|