MGE detailed information
MGE type: Genomic_island MGE length: 21240 bp
Accession: NZ_CP038324 Location: 4825763..4847002 Organism: Escherichia coli O157:H7 strain NE 1169-1 Replicon: chromosome
Accession: NZ_CP038324 Location: 4825763..4847002 Organism: Escherichia coli O157:H7 strain NE 1169-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E4U74_RS24045 () | 4821489..4822031 | + | 543 | WP_000934391.1 | hypothetical protein | - |
| E4U74_RS24050 () | 4822324..4824474 | + | 2151 | WP_001298933.1 | pyruvate/proton symporter BtsT | - |
| E4U74_RS24055 () | 4824524..4824727 | + | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| E4U74_RS24060 () | 4824738..4825694 | + | 957 | WP_001297640.1 | GTPase | - |
| E4U74_RS24065 () | 4825763..4827121 | - | 1359 | WP_001304004.1 | DUF262 domain-containing protein | - |
| E4U74_RS24070 () | 4827130..4827414 | - | 285 | WP_001304005.1 | DUF262 domain-containing protein | - |
| E4U74_RS24075 () | 4827692..4830124 | + | 2433 | WP_000819018.1 | DEAD/DEAH box helicase family protein | - |
| E4U74_RS24080 () | 4830191..4831660 | + | 1470 | WP_001302468.1 | type I restriction-modification system subunit M | - |
| E4U74_RS24085 () | 4831660..4833414 | + | 1755 | WP_000110082.1 | restriction endonuclease subunit S | - |
| - () | 4833564..4833640 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4833564..4833640 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4833564..4833640 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4833564..4833640 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4833564..4833640 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 4833564..4833640 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 4833564..4833640 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 4833564..4833640 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| E4U74_RS24090 () | 4833635..4833976 | + | 342 | WP_000132630.1 | endoribonuclease SymE | Toxin Detail |
| E4U74_RS24095 () | 4834023..4835186 | - | 1164 | WP_001304006.1 | DUF1524 domain-containing protein | - |
| E4U74_RS24100 () | 4835234..4836115 | - | 882 | WP_001304007.1 | DUF262 domain-containing protein | - |
| E4U74_RS24105 () | 4836212..4836376 | - | 165 | WP_000394274.1 | DUF1127 domain-containing protein | - |
| E4U74_RS24110 () | 4836553..4837965 | + | 1413 | WP_000199295.1 | PLP-dependent aminotransferase family protein | - |
| E4U74_RS24115 () | 4838208..4838408 | - | 201 | WP_001310455.1 | hypothetical protein | - |
| E4U74_RS24120 () | 4838383..4839165 | - | 783 | WP_001303778.1 | Recombination-promoting nuclease RpnD | VF |
| E4U74_RS24125 () | 4839632..4840864 | + | 1233 | WP_001136983.1 | multidrug efflux MFS transporter MdtM | - |
| E4U74_RS24130 () | 4840905..4842176 | + | 1272 | WP_001037406.1 | DUF445 domain-containing protein | - |
| E4U74_RS24135 () | 4842292..4843443 | + | 1152 | WP_001302931.1 | 2-hydroxyacyl-CoA dehydratase subunit D | - |
| E4U74_RS24140 () | 4843453..4844220 | + | 768 | WP_000222489.1 | hypothetical protein | - |
| E4U74_RS24145 () | 4844217..4844483 | + | 267 | WP_000657677.1 | DUF3343 domain-containing protein | - |
| E4U74_RS24150 () | 4844795..4847002 | + | 2208 | WP_000535072.1 | hypothetical protein | VF |
| E4U74_RS24155 () | 4847268..4848110 | + | 843 | WP_000746206.1 | YjiK family protein | - |
| E4U74_RS24160 () | 4848178..4849356 | + | 1179 | WP_001089435.1 | MFS transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | NC_002655 | 5456776..5475497 | 0.003 | |||
| Escherichia coli O157:H7 str. Sakai | NC_002695 | 5426911..5445631 | 0.003 |