MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 92701 bp
Accession: NZ_CP038323 Location: 1..92701 Organism: Escherichia coli O157:H7 strain NE1127 Replicon: plasmid pNE1127-1
Accession: NZ_CP038323 Location: 1..92701 Organism: Escherichia coli O157:H7 strain NE1127 Replicon: plasmid pNE1127-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E3168_RS27990 () | 1..978 | + | 978 | WP_000361615.1 | RepB family plasmid replication initiator protein | - |
| E3168_RS27995 () | 1263..2003 | - | 741 | WP_001066920.1 | IS91 family transposase ISMno23 | Transposase |
| E3168_RS28000 () | 2124..2354 | - | 231 | WP_010891288.1 | hypothetical protein | - |
| E3168_RS28005 () | 2485..2977 | - | 493 | Protein_3 | Transcriptional repressor MprA | VF |
| E3168_RS28010 () | 3098..4537 | - | 1440 | WP_001213545.1 | Hemolysin secretion protein D, chromosomal | VF |
| E3168_RS28015 () | 4541..6661 | - | 2121 | WP_000987091.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| E3168_RS28020 () | 6711..9707 | - | 2997 | WP_000217739.1 | Hemolysin, chromosomal | VF |
| E3168_RS28025 () | 9709..10224 | - | 516 | WP_000839950.1 | Hemolysin-activating lysine-acyltransferase HlyC | VF |
| E3168_RS28030 () | 10765..11936 | - | 1172 | Protein_8 | IS3 family transposase ISLad1 | Transposase |
| E3168_RS28035 () | 12115..12516 | - | 402 | WP_000971918.1 | GspS family T2SS pilot lipoprotein variant EptO | - |
| E3168_RS28040 () | 12608..13441 | - | 834 | WP_000096786.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| E3168_RS28045 () | 13499..14011 | - | 513 | WP_001004187.1 | Type II secretion system protein M | VF |
| E3168_RS28050 () | 13998..15170 | - | 1173 | WP_071525076.1 | Type II secretion system protein L | VF |
| E3168_RS28055 () | 15209..16186 | - | 978 | WP_000776550.1 | Putative type II secretion system protein K | VF |
| E3168_RS28060 () | 16183..16782 | - | 600 | WP_000082782.1 | Type II secretion system protein J | VF |
| E3168_RS28065 () | 16779..17126 | - | 348 | WP_000173396.1 | Type II secretion system protein I | VF |
| E3168_RS28070 () | 17141..17695 | - | 555 | WP_000082929.1 | Putative type II secretion system protein H | VF |
| E3168_RS28075 () | 17692..18126 | - | 435 | WP_001231211.1 | Type II secretion system protein G | VF |
| E3168_RS28080 () | 18157..19380 | - | 1224 | WP_001173152.1 | Type II secretion system protein F | VF |
| E3168_RS28085 () | 19382..20887 | - | 1506 | WP_000092338.1 | Type II secretion system protein E | VF |
| E3168_RS28090 () | 20887..22854 | - | 1968 | WP_001302177.1 | Type II secretion system protein D | VF |
| E3168_RS28095 () | 22855..23730 | - | 876 | WP_001302175.1 | Type II secretion system protein C | VF |
| E3168_RS28100 () | 23817..26513 | - | 2697 | WP_001358886.1 | Metalloprotease StcE | VF |
| E3168_RS28105 () | 26967..27053 | + | 87 | Protein_23 | IS3 family transposase ISEhe3 | Transposase |
| E3168_RS28110 () | 27157..27345 | - | 189 | Protein_24 | hypothetical protein | - |
| E3168_RS28115 () | 27398..28396 | - | 999 | WP_001302181.1 | Lipid A biosynthesis myristoyltransferase | VF |
| E3168_RS28120 () | 28470..30191 | - | 1722 | WP_000550559.1 | phosphoethanolamine transferase CptA | - |
| E3168_RS28125 () | 30281..31387 | - | 1107 | WP_000975743.1 | glycosyltransferase family 4 protein | - |
| E3168_RS28130 () | 31387..32208 | - | 822 | WP_001302199.1 | polysaccharide deacetylase family protein | - |
| E3168_RS28135 () | 33650..34131 | + | 482 | Protein_29 | IS1 family transposase IS1N | Transposase |
| E3168_RS28140 () | 34387..38289 | - | 3903 | WP_001034100.1 | Serine protease EspP | VF |
| E3168_RS28145 () | 38470..39458 | - | 989 | Protein_31 | IS3 family transposase IS629 | Transposase |
| E3168_RS28150 () | 39515..39904 | - | 390 | WP_001172748.1 | cytochrome b562 family protein | - |
| E3168_RS28155 () | 39948..42158 | - | 2211 | WP_000592771.1 | Catalase-peroxidase | VF |
| E3168_RS28160 () | 42335..42520 | + | 186 | WP_001302179.1 | hypothetical protein | - |
| E3168_RS28165 () | 42520..42936 | + | 417 | Protein_35 | transposase zinc-binding domain-containing protein | - |
| E3168_RS28170 () | 42936..43502 | + | 567 | Protein_36 | IS3 family transposase ISSd1 | Transposase |
| E3168_RS28175 () | 43546..43761 | + | 216 | Protein_37 | transposase | - |
| E3168_RS28180 () | 43861..44067 | - | 207 | WP_001105064.1 | hypothetical protein | - |
| E3168_RS28185 () | 44162..44437 | - | 276 | WP_000421248.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| E3168_RS28190 () | 44437..44721 | - | 285 | WP_001178089.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| E3168_RS28195 () | 45634..46491 | - | 858 | WP_000130945.1 | incFII family plasmid replication initiator RepA | - |
| E3168_RS28200 () | 46484..46558 | - | 75 | WP_001370046.1 | RepA leader peptide Tap | - |
| E3168_RS28205 () | 46794..47048 | - | 255 | WP_000083831.1 | replication regulatory protein RepA | - |
| E3168_RS28210 () | 47288..47626 | - | 339 | WP_000766796.1 | hypothetical protein | - |
| E3168_RS28215 () | 47664..47873 | - | 210 | WP_001302200.1 | hemolysin expression modulator Hha | - |
| E3168_RS28220 () | 47919..48380 | - | 462 | WP_001233853.1 | thermonuclease family protein | - |
| E3168_RS28225 () | 48625..48837 | - | 213 | WP_001302189.1 | ANR family transcriptional regulator | - |
| E3168_RS28230 () | 48970..49530 | - | 561 | WP_000840472.1 | fertility inhibition protein FinO | - |
| E3168_RS28235 () | 49633..50493 | - | 861 | WP_000704522.1 | putative protein YcjY | VF |
| E3168_RS28240 () | 50552..51298 | - | 747 | WP_000205762.1 | conjugal transfer pilus acetylase TraX | - |
| E3168_RS28245 () | 51318..52706 | - | 1389 | Protein_51 | Multifunctional conjugation protein TraI | Relaxase |
| E3168_RS28250 () | 52763..53014 | + | 252 | Protein_52 | IS3 family transposase IS1203 | Transposase |
| E3168_RS28255 () | 53021..53266 | + | 246 | Protein_53 | IS3 family transposase IS1203 | Transposase |
| E3168_RS28260 () | 53259..53483 | - | 225 | Protein_54 | IS3 family transposase IS3H | Transposase |
| E3168_RS28265 () | 53557..63066 | - | 9510 | WP_000581721.1 | Toxin B | VF |
| E3168_RS28270 () | 63173..63325 | - | 153 | Protein_56 | IS1 family transposase | - |
| E3168_RS28275 () | 63286..63442 | - | 157 | Protein_57 | IS21 family transposase ISEc62 | Transposase |
| E3168_RS28280 () | 63482..63745 | - | 264 | Protein_58 | IS21 family transposase ISEc62 | Transposase |
| E3168_RS28285 () | 63839..64188 | + | 350 | Protein_59 | IS3 family transposase IS3H | Transposase |
| E3168_RS28290 () | 64832..65263 | - | 432 | WP_001453090.1 | hypothetical protein | - |
| E3168_RS28295 () | 65331..67352 | - | 2022 | Protein_61 | hypothetical protein | Relaxase |
| E3168_RS28300 () | 67486..67644 | - | 159 | WP_001302184.1 | type I toxin-antitoxin system Hok family toxin | - |
| - () | 67709..67907 | - | 199 | NuclAT_0 | - | - |
| - () | 67709..67907 | - | 199 | NuclAT_0 | - | - |
| - () | 67709..67907 | - | 199 | NuclAT_0 | - | - |
| - () | 67709..67907 | - | 199 | NuclAT_0 | - | - |
| E3168_RS28305 () | 67876..68637 | - | 762 | WP_001276250.1 | plasmid SOS inhibition protein A | - |
| E3168_RS28310 () | 68634..69068 | - | 435 | WP_000845908.1 | conjugation system SOS inhibitor PsiB | - |
| E3168_RS28315 () | 69123..71081 | - | 1959 | WP_000117168.1 | ParB/RepB/Spo0J family partition protein | - |
| E3168_RS28320 () | 71147..71380 | - | 234 | WP_000005995.1 | DUF905 family protein | - |
| E3168_RS28325 () | 71437..71889 | - | 453 | WP_000290823.1 | single-stranded DNA-binding protein | - |
| E3168_RS28330 () | 71915..72121 | - | 207 | WP_000547965.1 | hypothetical protein | - |
| E3168_RS28335 () | 72191..72646 | + | 456 | WP_001358896.1 | hypothetical protein | - |
| E3168_RS28340 () | 72732..73295 | - | 564 | WP_001302171.1 | class I SAM-dependent methyltransferase | - |
| E3168_RS28345 () | 73342..74703 | - | 1362 | WP_000199442.1 | DUF3560 domain-containing protein | - |
| E3168_RS28350 () | 74755..74985 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| E3168_RS28355 () | 75473..75862 | - | 390 | WP_001303399.1 | hypothetical protein | - |
| E3168_RS28360 () | 75981..76172 | - | 192 | WP_001027495.1 | hypothetical protein | - |
| E3168_RS28365 () | 76169..76591 | - | 423 | WP_000271685.1 | DUF1380 family protein | - |
| E3168_RS28370 () | 76638..76940 | - | 303 | WP_010891293.1 | antirestriction protein | - |
| E3168_RS28375 () | 77036..77608 | - | 573 | WP_001310284.1 | DUF1472 domain-containing protein | - |
| E3168_RS28380 () | 77924..78257 | - | 334 | Protein_78 | hypothetical protein | - |
| E3168_RS28385 () | 78303..78857 | - | 555 | WP_001358893.1 | DUF1380 family protein | - |
| E3168_RS28390 () | 78751..78972 | - | 222 | WP_001104869.1 | hypothetical protein | - |
| E3168_RS28395 () | 78973..79656 | - | 684 | WP_000085945.1 | DNA methylase | - |
| E3168_RS28400 () | 79733..80038 | - | 306 | WP_010891292.1 | hypothetical protein | - |
| E3168_RS28405 () | 80042..80944 | - | 903 | WP_000273919.1 | DUF1281 domain-containing protein | - |
| E3168_RS28410 () | 81021..82745 | - | 1725 | WP_000138832.1 | group II intron reverse transcriptase/maturase | - |
| E3168_RS28415 () | 84045..85016 | - | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| E3168_RS28420 () | 85016..86182 | - | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| E3168_RS28425 () | 86770..87108 | - | 339 | WP_071525396.1 | RepB family plasmid replication initiator protein | - |
| E3168_RS28430 () | 87070..88283 | + | 1214 | WP_162829202.1 | IS3 family transposase IS1203 | Transposase |
| E3168_RS28435 () | 89006..89812 | - | 807 | WP_000016989.1 | site-specific integrase | - |
| E3168_RS28440 () | 89813..90118 | - | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | - |
| E3168_RS28445 () | 90120..90338 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | - |
| E3168_RS28450 () | 90797..91480 | + | 684 | WP_010891291.1 | DNA-binding protein | - |
| E3168_RS28455 () | 91477..92097 | + | 621 | WP_001248529.1 | hypothetical protein | - |
| E3168_RS28460 () | 92094..92294 | + | 201 | WP_000708307.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|