MGE detailed information
MGE type: Conjugative plasmid MGE length: 145329 bp
Accession: NZ_CP038322 Location: 1..145329 Organism: Escherichia coli O157:H7 strain NE1127 Replicon: plasmid pNE1127-2
Accession: NZ_CP038322 Location: 1..145329 Organism: Escherichia coli O157:H7 strain NE1127 Replicon: plasmid pNE1127-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E3168_RS27135 () | 2138..2572 | - | 435 | WP_000883925.1 | hypothetical protein | - |
| E3168_RS27140 () | 2590..3705 | - | 1116 | WP_000946102.1 | phosphoadenosine phosphosulfate reductase family protein | - |
| E3168_RS27145 () | 3974..4582 | + | 609 | WP_000849071.1 | hypothetical protein | - |
| E3168_RS27150 () | 4587..5108 | + | 522 | WP_000393785.1 | hypothetical protein | - |
| E3168_RS27155 () | 5111..5632 | + | 522 | WP_000805800.1 | hypothetical protein | - |
| E3168_RS27160 () | 5729..6202 | + | 474 | WP_000057877.1 | hypothetical protein | - |
| E3168_RS27165 () | 6213..6506 | + | 294 | WP_001370730.1 | hypothetical protein | - |
| E3168_RS27170 () | 6511..7365 | + | 855 | WP_000539392.1 | hypothetical protein | - |
| E3168_RS27175 () | 7365..8324 | + | 960 | WP_000829616.1 | S49 family peptidase | - |
| E3168_RS27180 () | 8340..9200 | + | 861 | WP_000139698.1 | DsbA family protein | - |
| E3168_RS27185 () | 9234..9662 | + | 429 | WP_000591074.1 | hypothetical protein | - |
| E3168_RS27190 () | 9719..10078 | + | 360 | WP_000422768.1 | hypothetical protein | - |
| E3168_RS27195 () | 10078..10524 | + | 447 | WP_000919345.1 | Fe3+-siderophore ABC transporter permease | - |
| E3168_RS27200 () | 10521..11039 | + | 519 | WP_000210756.1 | nitrite reductase | - |
| E3168_RS27205 () | 11039..11269 | + | 231 | WP_000972663.1 | hypothetical protein | - |
| E3168_RS27210 () | 11256..12113 | + | 858 | WP_001167032.1 | hypothetical protein | - |
| E3168_RS27215 () | 12344..12871 | + | 528 | WP_001236377.1 | thermonuclease family protein | - |
| E3168_RS27220 () | 12929..13201 | + | 273 | WP_001043047.1 | HU family DNA-binding protein | - |
| E3168_RS27225 () | 13289..13582 | + | 294 | WP_001239997.1 | chromosome segregation protein ParM | - |
| E3168_RS27230 () | 13609..13911 | - | 303 | WP_000124640.1 | XRE family transcriptional regulator | Antitoxin Detail |
| E3168_RS27235 () | 13916..14266 | - | 351 | WP_000270043.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| E3168_RS27240 () | 14429..14977 | + | 549 | WP_001061574.1 | transcriptional regulator | - |
| E3168_RS27245 () | 15318..15512 | + | 195 | WP_000343597.1 | hypothetical protein | - |
| E3168_RS27250 () | 15523..15894 | + | 372 | WP_000516916.1 | hypothetical protein | - |
| E3168_RS27255 () | 15887..16357 | + | 471 | WP_001281821.1 | hypothetical protein | - |
| E3168_RS27260 () | 16372..16707 | - | 336 | WP_000683476.1 | hypothetical protein | - |
| E3168_RS27265 () | 16804..17292 | + | 489 | WP_001273096.1 | DUF1643 domain-containing protein | - |
| E3168_RS27270 () | 17295..17792 | + | 498 | WP_000062185.1 | hypothetical protein | - |
| E3168_RS27275 () | 18007..18711 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| E3168_RS27280 () | 18776..18955 | - | 180 | Protein_30 | helix-turn-helix transcriptional regulator | - |
| E3168_RS27285 () | 19262..19966 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| E3168_RS27290 () | 20019..20816 | - | 798 | Protein_32 | class 1 integron integrase IntI1 | - |
| E3168_RS27295 () | 20962..21753 | + | 792 | WP_001206356.1 | ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA2 | - |
| E3168_RS27300 () | 21917..22264 | + | 348 | WP_000679427.1 | quaternary ammonium compound efflux SMR transporter QacE delta 1 | - |
| E3168_RS27305 () | 22258..23097 | + | 840 | WP_000259031.1 | sulfonamide-resistant dihydropteroate synthase Sul1 | - |
| E3168_RS27310 () | 23502..25043 | + | 1542 | WP_000050481.1 | IS91 family transposase | - |
| E3168_RS27315 () | 25165..25782 | - | 618 | WP_000256638.1 | ATP-dependent Clp protease proteolytic subunit | - |
| E3168_RS27320 () | 25808..26254 | - | 447 | WP_001274976.1 | hypothetical protein | - |
| E3168_RS27325 () | 26235..26795 | - | 561 | WP_001143450.1 | trimethoprim-resistant dihydrofolate reductase DfrA23 | - |
| E3168_RS27330 () | 26795..27142 | - | 348 | WP_042849136.1 | hypothetical protein | - |
| E3168_RS27335 () | 27200..27409 | - | 210 | Protein_41 | hypothetical protein | - |
| E3168_RS27340 () | 27634..30606 | - | 2973 | WP_001138073.1 | Tn3 family transposase | - |
| E3168_RS27345 () | 30609..31166 | - | 558 | WP_001162012.1 | recombinase family protein | - |
| E3168_RS27350 () | 31463..31684 | - | 222 | Protein_44 | tyrosine-type recombinase/integrase | - |
| E3168_RS27355 () | 31750..32454 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| E3168_RS27360 () | 32460..32600 | + | 141 | WP_001044210.1 | hypothetical protein | - |
| E3168_RS27365 () | 33086..33823 | + | 738 | WP_001366550.1 | recombinase family protein | - |
| E3168_RS27370 () | 33820..34044 | + | 225 | WP_000743213.1 | hypothetical protein | - |
| E3168_RS27375 () | 34255..35748 | + | 1494 | WP_001120888.1 | IS91-like element ISVsa3 family transposase | - |
| E3168_RS27380 () | 35779..36663 | + | 885 | WP_021598067.1 | DUF3363 domain-containing protein | - |
| E3168_RS27385 () | 36880..38094 | + | 1215 | WP_023300759.1 | chloramphenicol/florfenicol efflux MFS transporter FloR | - |
| E3168_RS27390 () | 38122..38427 | + | 306 | WP_001255015.1 | LysR family transcriptional regulator | - |
| E3168_RS27395 () | 38539..38727 | + | 189 | Protein_53 | IS91 family transposase | - |
| E3168_RS27400 () | 38694..39893 | - | 1200 | WP_000804063.1 | tetracycline efflux MFS transporter Tet(A) | - |
| E3168_RS27405 () | 39999..40649 | + | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| E3168_RS27410 () | 40681..40923 | - | 243 | WP_000844627.1 | transposase | - |
| E3168_RS27415 () | 41229..42065 | - | 837 | WP_000480968.1 | aminoglycoside O-phosphotransferase APH(6)-Id | - |
| E3168_RS27420 () | 42065..42868 | - | 804 | WP_001082319.1 | aminoglycoside O-phosphotransferase APH(3'')-Ib | - |
| E3168_RS27425 () | 42929..43744 | - | 816 | WP_001043260.1 | sulfonamide-resistant dihydropteroate synthase Sul2 | - |
| E3168_RS27430 () | 44051..44362 | + | 312 | WP_000338945.1 | hypothetical protein | - |
| E3168_RS27435 () | 44536..45321 | + | 786 | WP_001151304.1 | ParA family protein | - |
| E3168_RS27440 () | 45325..46506 | + | 1182 | WP_001207227.1 | ParB/RepB/Spo0J family partition protein | - |
| E3168_RS27445 () | 46555..46827 | + | 273 | WP_000703827.1 | helix-turn-helix domain-containing protein | - |
| E3168_RS27450 () | 46880..47515 | - | 636 | WP_000074431.1 | N-6 DNA methylase | - |
| E3168_RS27455 () | 47607..47750 | - | 144 | WP_000939033.1 | hypothetical protein | - |
| E3168_RS27460 () | 48069..48446 | + | 378 | WP_001125905.1 | hypothetical protein | - |
| E3168_RS27465 () | 48439..48720 | + | 282 | WP_000044824.1 | hypothetical protein | - |
| E3168_RS27470 () | 48695..49369 | + | 675 | WP_000344151.1 | thymidylate kinase | - |
| E3168_RS27475 () | 49437..49868 | + | 432 | WP_005507681.1 | hypothetical protein | - |
| E3168_RS27480 () | 49874..50185 | + | 312 | WP_002210541.1 | hypothetical protein | - |
| E3168_RS27485 () | 50194..50694 | + | 501 | WP_000647189.1 | hypothetical protein | - |
| E3168_RS27490 () | 50698..52125 | + | 1428 | WP_000936896.1 | DNA cytosine methyltransferase | - |
| E3168_RS27495 () | 52125..52781 | + | 657 | WP_000268551.1 | hypothetical protein | - |
| E3168_RS27500 () | 52987..53205 | + | 219 | WP_000362482.1 | hypothetical protein | - |
| E3168_RS27505 () | 53299..53916 | + | 618 | WP_000464631.1 | hypothetical protein | - |
| E3168_RS27510 () | 54128..54427 | + | 300 | WP_000542259.1 | hypothetical protein | - |
| E3168_RS27515 () | 54519..55007 | - | 489 | WP_000468105.1 | hypothetical protein | - |
| E3168_RS27520 () | 55022..57214 | - | 2193 | WP_000366822.1 | DNA topoisomerase 3 | - |
| E3168_RS27525 () | 57214..57447 | - | 234 | WP_001191892.1 | hypothetical protein | - |
| E3168_RS27530 () | 57429..58046 | - | 618 | WP_001249396.1 | hypothetical protein | - |
| E3168_RS27535 () | 58214..61192 | + | 2979 | WP_001337757.1 | TraI domain-containing protein | - |
| E3168_RS27540 () | 61189..63054 | + | 1866 | WP_000178856.1 | conjugative transfer system coupling protein TraD | - |
| E3168_RS27545 () | 63065..63649 | + | 585 | WP_000332866.1 | hypothetical protein | - |
| E3168_RS27550 () | 63606..64235 | + | 630 | WP_000743450.1 | DUF4400 domain-containing protein | - |
| E3168_RS27555 () | 64245..64691 | + | 447 | WP_000122506.1 | hypothetical protein | - |
| E3168_RS27560 () | 64701..65078 | + | 378 | WP_000869261.1 | hypothetical protein | - |
| E3168_RS27565 () | 65078..65740 | + | 663 | WP_001231463.1 | hypothetical protein | - |
| E3168_RS27570 () | 66064..66441 | + | 378 | WP_000509509.1 | hypothetical protein | - |
| E3168_RS27575 () | 66586..66867 | + | 282 | WP_000805625.1 | type IV conjugative transfer system protein TraL | - |
| E3168_RS27580 () | 66864..67490 | + | 627 | WP_001049716.1 | hypothetical protein | - |
| E3168_RS27585 () | 67474..68391 | + | 918 | WP_000794249.1 | type-F conjugative transfer system secretin TraK | - |
| E3168_RS27590 () | 68391..69704 | + | 1314 | WP_024131605.1 | conjugal transfer protein TraB | - |
| E3168_RS27595 () | 69701..70279 | + | 579 | WP_000793435.1 | type IV conjugative transfer system lipoprotein TraV | - |
| E3168_RS27600 () | 70283..70675 | + | 393 | WP_000479535.1 | hypothetical protein | - |
| E3168_RS27605 () | 70876..76407 | + | 5532 | WP_000606833.1 | DUF4165 domain-containing protein | - |
| E3168_RS27610 () | 76556..77263 | + | 708 | WP_001259347.1 | DsbC family protein | - |
| E3168_RS27615 () | 77260..79707 | + | 2448 | WP_000637386.1 | type IV secretion system protein TraC | - |
| E3168_RS27620 () | 79722..80039 | + | 318 | WP_000351984.1 | hypothetical protein | - |
| E3168_RS27625 () | 80036..80566 | + | 531 | WP_001010738.1 | S26 family signal peptidase | - |
| E3168_RS27630 () | 80529..81794 | + | 1266 | WP_000621288.1 | conjugal transfer protein TraW | - |
| E3168_RS27635 () | 81791..82462 | + | 672 | WP_001337754.1 | EAL domain-containing protein | - |
| E3168_RS27640 () | 82459..83466 | + | 1008 | WP_000983283.1 | TraU family protein | - |
| E3168_RS27645 () | 83570..86380 | + | 2811 | WP_001909286.1 | conjugal transfer mating pair stabilization protein TraN | - |
| E3168_RS27650 () | 86419..87279 | - | 861 | WP_000709517.1 | hypothetical protein | - |
| E3168_RS27655 () | 87402..88043 | - | 642 | WP_000796664.1 | hypothetical protein | - |
| E3168_RS27660 () | 88337..88657 | + | 321 | WP_000547566.1 | hypothetical protein | - |
| E3168_RS27665 () | 88961..89146 | + | 186 | WP_001186917.1 | hypothetical protein | - |
| E3168_RS27670 () | 89366..90334 | + | 969 | WP_000085162.1 | CbbQ/NirQ/NorQ C-terminal domain-containing protein | - |
| E3168_RS27675 () | 90345..91253 | + | 909 | WP_000739139.1 | hypothetical protein | - |
| E3168_RS27680 () | 91314..91844 | + | 531 | WP_000987165.1 | single-stranded DNA-binding protein | - |
| E3168_RS27685 () | 91939..92928 | + | 990 | WP_001282585.1 | phage recombination protein Bet | - |
| E3168_RS27690 () | 92991..94001 | + | 1011 | WP_000706865.1 | YqaJ viral recombinase family protein | - |
| E3168_RS27695 () | 94201..95478 | + | 1278 | WP_000170086.1 | DUF3150 domain-containing protein | - |
| E3168_RS27700 () | 95563..97359 | + | 1797 | WP_021598075.1 | VWA domain-containing protein | - |
| E3168_RS27705 () | 97421..97756 | + | 336 | WP_001071288.1 | hypothetical protein | - |
| E3168_RS27710 () | 98021..98560 | + | 540 | WP_000018872.1 | hypothetical protein | - |
| E3168_RS27715 () | 98651..99151 | + | 501 | WP_000793769.1 | hypothetical protein | - |
| E3168_RS27720 () | 99225..100109 | + | 885 | WP_000477209.1 | hypothetical protein | - |
| E3168_RS27725 () | 100175..100399 | + | 225 | WP_001102700.1 | 2Fe-2S ferredoxin-like protein | - |
| E3168_RS27730 () | 100461..100850 | + | 390 | WP_000026577.1 | hypothetical protein | - |
| E3168_RS27735 () | 100840..101292 | + | 453 | WP_001176699.1 | hypothetical protein | - |
| E3168_RS27740 () | 101370..101612 | - | 243 | WP_002210529.1 | hypothetical protein | - |
| E3168_RS27745 () | 101630..101821 | + | 192 | WP_000651508.1 | hypothetical protein | - |
| E3168_RS27750 () | 101866..102243 | + | 378 | WP_001337696.1 | hypothetical protein | - |
| E3168_RS27755 () | 102435..102779 | + | 345 | WP_000209093.1 | hypothetical protein | - |
| E3168_RS27760 () | 102857..103159 | + | 303 | WP_000410925.1 | hypothetical protein | - |
| E3168_RS27765 () | 103237..104862 | + | 1626 | WP_000201432.1 | DNA cytosine methyltransferase | - |
| E3168_RS27770 () | 104923..105354 | + | 432 | WP_000687894.1 | hypothetical protein | - |
| E3168_RS27775 () | 105428..105982 | + | 555 | WP_001093868.1 | hypothetical protein | - |
| E3168_RS27780 () | 106215..106601 | + | 387 | WP_000042274.1 | hypothetical protein | - |
| E3168_RS27785 () | 106689..109142 | + | 2454 | WP_001187970.1 | phosphoadenosine phosphosulfate reductase | - |
| E3168_RS27790 () | 109174..110502 | - | 1329 | WP_000547316.1 | IS4-like element IS4 family transposase | - |
| E3168_RS27795 () | 110782..110985 | + | 204 | WP_000050848.1 | hypothetical protein | - |
| E3168_RS27800 () | 111057..111662 | + | 606 | WP_000071870.1 | 5'-deoxynucleotidase | - |
| E3168_RS27805 () | 111655..111924 | + | 270 | WP_000184110.1 | hypothetical protein | - |
| E3168_RS27810 () | 111938..112156 | + | 219 | WP_000260293.1 | hypothetical protein | - |
| E3168_RS27815 () | 112230..112787 | + | 558 | WP_000064431.1 | pyruvate dehydrogenase | - |
| E3168_RS27820 () | 112862..113713 | + | 852 | WP_000595210.1 | hypothetical protein | - |
| E3168_RS27825 () | 114171..114557 | + | 387 | WP_001077335.1 | hypothetical protein | - |
| E3168_RS27830 () | 114735..116462 | + | 1728 | WP_000122923.1 | toprim domain-containing protein | - |
| E3168_RS27835 () | 116449..116727 | + | 279 | WP_000268337.1 | hypothetical protein | - |
| E3168_RS27840 () | 116800..117039 | + | 240 | WP_000714162.1 | permease | - |
| E3168_RS27845 () | 117049..117165 | + | 117 | WP_000338626.1 | hypothetical protein | - |
| E3168_RS27850 () | 117286..117660 | + | 375 | WP_000868821.1 | hypothetical protein | - |
| E3168_RS27855 () | 117774..118499 | + | 726 | WP_000988732.1 | hypothetical protein | - |
| E3168_RS27860 () | 118740..122894 | + | 4155 | WP_014342219.1 | RHS domain-containing protein | - |
| E3168_RS27865 () | 122891..123163 | + | 273 | WP_000787563.1 | MafI family immunity protein | - |
| E3168_RS27870 () | 123168..123410 | + | 243 | WP_000750746.1 | hypothetical protein | - |
| E3168_RS27875 () | 123458..123757 | + | 300 | WP_011872911.1 | hypothetical protein | - |
| E3168_RS27880 () | 123924..124376 | + | 453 | WP_000791469.1 | hypothetical protein | - |
| E3168_RS27885 () | 124392..124994 | - | 603 | WP_000278322.1 | hypothetical protein | - |
| E3168_RS27890 () | 125256..125537 | + | 282 | WP_000575657.1 | hypothetical protein | - |
| E3168_RS27895 () | 125836..126372 | + | 537 | WP_000949433.1 | hypothetical protein | - |
| E3168_RS27900 () | 126375..127385 | + | 1011 | WP_000543934.1 | tyrosine-type recombinase/integrase | - |
| E3168_RS27905 () | 127390..128259 | + | 870 | WP_000997323.1 | 3'-5' exonuclease | - |
| E3168_RS27910 () | 128256..128747 | + | 492 | WP_000139717.1 | hypothetical protein | - |
| E3168_RS27915 () | 129074..129949 | + | 876 | WP_001097010.1 | DNA replication terminus site-binding protein | - |
| E3168_RS27920 () | 130102..131142 | + | 1041 | WP_000101568.1 | DNA-binding protein | - |
| E3168_RS27925 () | 131429..132940 | + | 1512 | WP_000811656.1 | ATP-dependent helicase | - |
| E3168_RS27930 () | 133051..134091 | + | 1041 | WP_001326396.1 | conjugal transfer protein TraF | - |
| E3168_RS27935 () | 134093..135526 | + | 1434 | WP_000256129.1 | conjugal transfer protein TraH | - |
| E3168_RS27940 () | 135539..139153 | + | 3615 | WP_000534551.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| E3168_RS27945 () | 139191..139553 | - | 363 | WP_000683483.1 | hypothetical protein | - |
| E3168_RS27950 () | 140269..140541 | + | 273 | WP_000356489.1 | helix-turn-helix domain-containing protein | - |
| E3168_RS27955 () | 140541..141074 | + | 534 | WP_032064504.1 | transglycosylase SLT domain-containing protein | - |
| E3168_RS27960 () | 141085..141693 | + | 609 | WP_000891157.1 | hypothetical protein | - |
| E3168_RS27965 () | 141690..142241 | + | 552 | WP_001020646.1 | hypothetical protein | - |
| E3168_RS27970 () | 142301..142720 | - | 420 | WP_000651490.1 | H-NS histone family protein | - |
| E3168_RS27975 () | 142722..143015 | - | 294 | WP_000919078.1 | hypothetical protein | - |
| E3168_RS27980 () | 143032..144015 | - | 984 | WP_000077458.1 | ParM/StbA family protein | - |
| E3168_RS27985 () | 144514..145053 | + | 540 | WP_001447712.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|