MGE detailed information
MGE type: Genomic_island MGE length: 21210 bp
Accession: NZ_CP038316 Location: 4708622..4729831 Organism: Escherichia coli O157:H7 strain NE92 Replicon: chromosome
Accession: NZ_CP038316 Location: 4708622..4729831 Organism: Escherichia coli O157:H7 strain NE92 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E3166_RS23305 () | 4704348..4704890 | + | 543 | WP_000934391.1 | hypothetical protein | - |
| E3166_RS23310 () | 4705183..4707333 | + | 2151 | WP_001298933.1 | pyruvate/proton symporter BtsT | - |
| E3166_RS23315 () | 4707383..4707586 | + | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| E3166_RS23320 () | 4707597..4708553 | + | 957 | WP_001459238.1 | GTPase | - |
| E3166_RS23325 () | 4708622..4709980 | - | 1359 | WP_001304004.1 | DUF262 domain-containing protein | - |
| E3166_RS23330 () | 4709989..4710273 | - | 285 | WP_001304005.1 | DUF262 domain-containing protein | - |
| E3166_RS23335 () | 4710551..4712983 | + | 2433 | WP_000819018.1 | DEAD/DEAH box helicase family protein | - |
| E3166_RS23340 () | 4713050..4714519 | + | 1470 | WP_001302468.1 | type I restriction-modification system subunit M | - |
| E3166_RS23345 () | 4714519..4716273 | + | 1755 | WP_000110082.1 | restriction endonuclease subunit S | - |
| - () | 4716423..4716499 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 4716423..4716499 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 4716423..4716499 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 4716423..4716499 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 4716423..4716499 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4716423..4716499 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4716423..4716499 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4716423..4716499 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| E3166_RS23350 () | 4716494..4716835 | + | 342 | WP_000132630.1 | endoribonuclease SymE | Toxin Detail |
| E3166_RS23355 () | 4716882..4718045 | - | 1164 | WP_001304006.1 | DUF1524 domain-containing protein | - |
| E3166_RS23360 () | 4718093..4718974 | - | 882 | WP_001304007.1 | DUF262 domain-containing protein | - |
| E3166_RS23365 () | 4719071..4719235 | - | 165 | WP_000394274.1 | DUF1127 domain-containing protein | - |
| E3166_RS23370 () | 4719412..4720824 | + | 1413 | WP_000199295.1 | PLP-dependent aminotransferase family protein | - |
| E3166_RS23375 () | 4721067..4721267 | - | 201 | WP_001310455.1 | hypothetical protein | - |
| E3166_RS23380 () | 4721242..4722024 | - | 783 | WP_001303778.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| E3166_RS23385 () | 4722491..4723723 | + | 1233 | WP_001136983.1 | multidrug efflux MFS transporter MdtM | - |
| E3166_RS23390 () | 4723764..4725035 | + | 1272 | WP_001037406.1 | DUF445 domain-containing protein | - |
| E3166_RS23395 () | 4725151..4726302 | + | 1152 | WP_001459237.1 | 2-hydroxyacyl-CoA dehydratase subunit D | - |
| E3166_RS23400 () | 4726312..4727079 | + | 768 | WP_000222489.1 | hypothetical protein | - |
| E3166_RS23405 () | 4727076..4727342 | + | 267 | WP_000657677.1 | DUF3343 domain-containing protein | - |
| E3166_RS23410 () | 4727654..4729831 | + | 2178 | WP_000535056.1 | T3SS effector pentapeptide repeat protein EspX6 | - |
| E3166_RS23415 () | 4730097..4730939 | + | 843 | WP_000746206.1 | YjiK family protein | - |
| E3166_RS23420 () | 4731007..4732185 | + | 1179 | WP_001089435.1 | MFS transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | NC_002655 | 5456776..5475497 | 0.003 | |||
| Escherichia coli O157:H7 str. Sakai | NC_002695 | 5426911..5445631 | 0.003 |