MGE detailed information
MGE type: Genomic_island MGE length: 21228 bp
Accession: NZ_CP038313 Location: 4772457..4793684 Organism: Escherichia coli O157:H7 strain OK1 Replicon: chromosome
Accession: NZ_CP038313 Location: 4772457..4793684 Organism: Escherichia coli O157:H7 strain OK1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E3173_RS23845 () | 4768183..4768725 | + | 543 | WP_000934391.1 | hypothetical protein | - |
| E3173_RS23850 () | 4769018..4771168 | + | 2151 | WP_001298933.1 | pyruvate/proton symporter BtsT | - |
| E3173_RS23855 () | 4771218..4771421 | + | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| E3173_RS23860 () | 4771432..4772388 | + | 957 | WP_001297640.1 | GTPase | - |
| E3173_RS23865 () | 4772457..4773815 | - | 1359 | WP_001304004.1 | DUF262 domain-containing protein | - |
| E3173_RS23870 () | 4773824..4774108 | - | 285 | WP_001304005.1 | DUF262 domain-containing protein | - |
| E3173_RS23875 () | 4774386..4776818 | + | 2433 | WP_000819018.1 | DEAD/DEAH box helicase family protein | - |
| E3173_RS23880 () | 4776885..4778354 | + | 1470 | WP_001302468.1 | type I restriction-modification system subunit M | - |
| E3173_RS23885 () | 4778354..4780108 | + | 1755 | WP_000110082.1 | restriction endonuclease subunit S | - |
| - () | 4780258..4780334 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4780258..4780334 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4780258..4780334 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4780258..4780334 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4780258..4780334 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 4780258..4780334 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 4780258..4780334 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 4780258..4780334 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| E3173_RS23890 () | 4780329..4780670 | + | 342 | WP_000132630.1 | endoribonuclease SymE | Toxin Detail |
| E3173_RS23895 () | 4780717..4781880 | - | 1164 | WP_001304006.1 | DUF1524 domain-containing protein | - |
| E3173_RS23900 () | 4781928..4782809 | - | 882 | WP_001304007.1 | DUF262 domain-containing protein | - |
| E3173_RS23905 () | 4782906..4783070 | - | 165 | WP_000394274.1 | DUF1127 domain-containing protein | - |
| E3173_RS23910 () | 4783247..4784659 | + | 1413 | WP_000199295.1 | PLP-dependent aminotransferase family protein | - |
| E3173_RS23915 () | 4784902..4785102 | - | 201 | WP_001310455.1 | hypothetical protein | - |
| E3173_RS23920 () | 4785077..4785859 | - | 783 | WP_001303778.1 | Recombination-promoting nuclease RpnD | VF |
| E3173_RS23925 () | 4786326..4787558 | + | 1233 | WP_001136983.1 | multidrug efflux MFS transporter MdtM | - |
| E3173_RS23930 () | 4787599..4788870 | + | 1272 | WP_001037406.1 | DUF445 domain-containing protein | - |
| E3173_RS23935 () | 4788986..4790137 | + | 1152 | WP_001302931.1 | 2-hydroxyacyl-CoA dehydratase subunit D | - |
| E3173_RS23940 () | 4790147..4790914 | + | 768 | WP_000222489.1 | hypothetical protein | - |
| E3173_RS23945 () | 4790911..4791177 | + | 267 | WP_000657677.1 | DUF3343 domain-containing protein | - |
| E3173_RS23950 () | 4791489..4793684 | + | 2196 | WP_000535069.1 | hypothetical protein | VF |
| E3173_RS23955 () | 4793950..4794792 | + | 843 | WP_000746206.1 | YjiK family protein | - |
| E3173_RS23960 () | 4794860..4796038 | + | 1179 | WP_001089435.1 | MFS transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | NC_002655 | 5456776..5475497 | 0.003 | |||
| Escherichia coli O157:H7 str. Sakai | NC_002695 | 5426911..5445631 | 0.003 |