MGE detailed information
MGE type: Genomic_island MGE length: 21219 bp
Accession: NZ_CP038309 Location: 4894950..4916168 Organism: Escherichia coli O157:H7 strain Show KS 470-1 Replicon: chromosome
Accession: NZ_CP038309 Location: 4894950..4916168 Organism: Escherichia coli O157:H7 strain Show KS 470-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E4U84_RS24790 () | 4890676..4891218 | + | 543 | WP_000934391.1 | hypothetical protein | - |
| E4U84_RS24795 () | 4891511..4893661 | + | 2151 | WP_001298933.1 | pyruvate/proton symporter BtsT | - |
| E4U84_RS24800 () | 4893711..4893914 | + | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| E4U84_RS24805 () | 4893925..4894881 | + | 957 | WP_001297640.1 | GTPase | - |
| E4U84_RS24810 () | 4894950..4896308 | - | 1359 | WP_001304004.1 | DUF262 domain-containing protein | - |
| E4U84_RS24815 () | 4896317..4896601 | - | 285 | WP_001304005.1 | DUF262 domain-containing protein | - |
| E4U84_RS24820 () | 4896879..4899311 | + | 2433 | WP_000819018.1 | DEAD/DEAH box helicase family protein | - |
| E4U84_RS24825 () | 4899378..4900847 | + | 1470 | WP_001302468.1 | type I restriction-modification system subunit M | - |
| E4U84_RS24830 () | 4900847..4902601 | + | 1755 | WP_000110082.1 | restriction endonuclease subunit S | - |
| - () | 4902751..4902827 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 4902751..4902827 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 4902751..4902827 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 4902751..4902827 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 4902751..4902827 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4902751..4902827 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4902751..4902827 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4902751..4902827 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| E4U84_RS24835 () | 4902822..4903163 | + | 342 | WP_000132630.1 | endoribonuclease SymE | Toxin Detail |
| E4U84_RS24840 () | 4903210..4904373 | - | 1164 | WP_001304006.1 | DUF1524 domain-containing protein | - |
| E4U84_RS24845 () | 4904421..4905302 | - | 882 | WP_153038068.1 | DUF262 domain-containing protein | - |
| E4U84_RS24850 () | 4905399..4905563 | - | 165 | WP_000394274.1 | DUF1127 domain-containing protein | - |
| E4U84_RS24855 () | 4905740..4907152 | + | 1413 | WP_000199295.1 | PLP-dependent aminotransferase family protein | - |
| E4U84_RS24860 () | 4907395..4907595 | - | 201 | WP_001310455.1 | hypothetical protein | - |
| E4U84_RS24865 () | 4907570..4908352 | - | 783 | WP_001303778.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| E4U84_RS24870 () | 4908819..4910051 | + | 1233 | WP_001136983.1 | multidrug efflux MFS transporter MdtM | - |
| E4U84_RS24875 () | 4910092..4911363 | + | 1272 | WP_001037406.1 | DUF445 domain-containing protein | - |
| E4U84_RS24880 () | 4911479..4912630 | + | 1152 | WP_001302931.1 | 2-hydroxyacyl-CoA dehydratase subunit D | - |
| E4U84_RS24885 () | 4912640..4913407 | + | 768 | WP_000222489.1 | hypothetical protein | - |
| E4U84_RS24890 () | 4913404..4913670 | + | 267 | WP_000657677.1 | DUF3343 domain-containing protein | - |
| E4U84_RS24895 () | 4913982..4916168 | + | 2187 | WP_000535053.1 | T3SS effector pentapeptide repeat protein EspX6 | - |
| E4U84_RS24900 () | 4916434..4917276 | + | 843 | WP_000746206.1 | YjiK family protein | - |
| E4U84_RS24905 () | 4917344..4918522 | + | 1179 | WP_001089435.1 | MFS transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | NC_002655 | 5456776..5475497 | 0.003 | |||
| Escherichia coli O157:H7 str. Sakai | NC_002695 | 5426911..5445631 | 0.003 |