MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 93167 bp
Accession: NZ_CP038308 Location: 1..93167 Organism: Escherichia coli O157:H7 strain SS NE 1040-1 Replicon: plasmid pNE1040-1
Accession: NZ_CP038308 Location: 1..93167 Organism: Escherichia coli O157:H7 strain SS NE 1040-1 Replicon: plasmid pNE1040-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E4U78_RS27575 () | 1..978 | + | 978 | WP_001508846.1 | RepB family plasmid replication initiator protein | - |
| E4U78_RS27580 () | 1263..2003 | - | 741 | WP_001066920.1 | IS91 family transposase ISMno23 | Transposase |
| E4U78_RS27585 () | 2124..2354 | - | 231 | WP_010891288.1 | hypothetical protein | - |
| E4U78_RS27590 () | 2485..2977 | - | 493 | Protein_3 | Transcriptional repressor MprA | VF |
| E4U78_RS27595 () | 3098..4537 | - | 1440 | WP_001213545.1 | Hemolysin secretion protein D, chromosomal | VF |
| E4U78_RS27600 () | 4541..6661 | - | 2121 | WP_000987091.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| E4U78_RS27605 () | 6711..9707 | - | 2997 | WP_000217739.1 | Hemolysin, chromosomal | VF |
| E4U78_RS27610 () | 9709..10224 | - | 516 | WP_000839950.1 | Hemolysin-activating lysine-acyltransferase HlyC | VF |
| E4U78_RS27615 () | 10765..11936 | - | 1172 | Protein_8 | IS3 family transposase ISLad1 | Transposase |
| E4U78_RS27620 () | 12115..12516 | - | 402 | WP_000971918.1 | GspS family T2SS pilot lipoprotein variant EptO | - |
| E4U78_RS27625 () | 12608..13441 | - | 834 | WP_000096786.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| E4U78_RS27630 () | 13499..14011 | - | 513 | WP_001004187.1 | Type II secretion system protein M | VF |
| E4U78_RS27635 () | 13998..15170 | - | 1173 | WP_071525076.1 | Type II secretion system protein L | VF |
| E4U78_RS27640 () | 15209..16186 | - | 978 | WP_000776550.1 | Putative type II secretion system protein K | VF |
| E4U78_RS27645 () | 16183..16782 | - | 600 | WP_000082782.1 | Type II secretion system protein J | VF |
| E4U78_RS27650 () | 16779..17126 | - | 348 | WP_000173396.1 | Type II secretion system protein I | VF |
| E4U78_RS27655 () | 17141..17695 | - | 555 | WP_000082929.1 | Putative type II secretion system protein H | VF |
| E4U78_RS27660 () | 17692..18126 | - | 435 | WP_001231211.1 | Type II secretion system protein G | VF |
| E4U78_RS27665 () | 18157..19380 | - | 1224 | WP_001173152.1 | Type II secretion system protein F | VF |
| E4U78_RS27670 () | 19382..20887 | - | 1506 | WP_000092338.1 | Type II secretion system protein E | VF |
| E4U78_RS27675 () | 20887..22854 | - | 1968 | WP_001302177.1 | Type II secretion system protein D | VF |
| E4U78_RS27680 () | 22855..23730 | - | 876 | WP_001302175.1 | Type II secretion system protein C | VF |
| E4U78_RS27685 () | 23817..26513 | - | 2697 | WP_072141201.1 | Metalloprotease StcE | VF |
| E4U78_RS27690 () | 26953..27039 | + | 87 | Protein_23 | IS3 family transposase ISEhe3 | Transposase |
| E4U78_RS27695 () | 27143..27331 | - | 189 | Protein_24 | hypothetical protein | - |
| E4U78_RS27700 () | 27384..28382 | - | 999 | WP_001302181.1 | Lipid A biosynthesis myristoyltransferase | VF |
| E4U78_RS27705 () | 28456..30177 | - | 1722 | WP_000550559.1 | phosphoethanolamine transferase CptA | - |
| E4U78_RS27710 () | 30267..31373 | - | 1107 | WP_000975743.1 | glycosyltransferase family 4 protein | - |
| E4U78_RS27715 () | 31373..32194 | - | 822 | WP_001302199.1 | polysaccharide deacetylase family protein | - |
| E4U78_RS27720 () | 33635..34116 | + | 482 | Protein_29 | IS1 family transposase IS1N | Transposase |
| E4U78_RS27725 () | 34372..38274 | - | 3903 | WP_001034097.1 | Serine protease EspP | VF |
| E4U78_RS27730 () | 38455..39443 | - | 989 | Protein_31 | IS3 family transposase IS629 | Transposase |
| E4U78_RS27735 () | 39500..39889 | - | 390 | WP_001172748.1 | cytochrome b562 family protein | - |
| E4U78_RS27740 () | 39933..42143 | - | 2211 | WP_000592771.1 | Catalase-peroxidase | VF |
| E4U78_RS27745 () | 42320..42505 | + | 186 | WP_001302179.1 | hypothetical protein | - |
| E4U78_RS27750 () | 42505..42921 | + | 417 | Protein_35 | transposase zinc-binding domain-containing protein | - |
| E4U78_RS27755 () | 42921..43487 | + | 567 | Protein_36 | IS3 family transposase ISSd1 | Transposase |
| E4U78_RS27760 () | 43531..43746 | + | 216 | Protein_37 | transposase | - |
| E4U78_RS27765 () | 43846..44052 | - | 207 | WP_001105064.1 | hypothetical protein | - |
| E4U78_RS27770 () | 44147..44422 | - | 276 | WP_000421248.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| E4U78_RS27775 () | 44422..44706 | - | 285 | WP_001178089.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| E4U78_RS27780 () | 45618..46475 | - | 858 | WP_000130945.1 | incFII family plasmid replication initiator RepA | - |
| E4U78_RS27785 () | 46468..46542 | - | 75 | WP_001370046.1 | RepA leader peptide Tap | - |
| E4U78_RS27790 () | 46778..47032 | - | 255 | WP_000083831.1 | replication regulatory protein RepA | - |
| E4U78_RS27795 () | 47272..47610 | - | 339 | WP_000766796.1 | hypothetical protein | - |
| E4U78_RS27800 () | 47648..47857 | - | 210 | WP_001302200.1 | hemolysin expression modulator Hha | - |
| E4U78_RS27805 () | 47903..48364 | - | 462 | WP_001233853.1 | thermonuclease family protein | - |
| E4U78_RS27810 () | 48609..48821 | - | 213 | WP_001302189.1 | ANR family transcriptional regulator | - |
| E4U78_RS27815 () | 48954..49514 | - | 561 | WP_000840472.1 | fertility inhibition protein FinO | - |
| E4U78_RS27820 () | 49617..50477 | - | 861 | WP_000704522.1 | putative protein YcjY | VF |
| E4U78_RS27825 () | 50536..51282 | - | 747 | WP_000205762.1 | conjugal transfer pilus acetylase TraX | - |
| E4U78_RS27830 () | 51302..52645 | - | 1344 | Protein_51 | Multifunctional conjugation protein TraI | Relaxase |
| E4U78_RS27835 () | 52684..54222 | - | 1539 | WP_000998048.1 | IS66 family transposase ISEc8 | Transposase |
| E4U78_RS27840 () | 54272..54619 | - | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| E4U78_RS27845 () | 54616..54996 | - | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| E4U78_RS27850 () | 55197..55448 | + | 252 | Protein_55 | IS3 family transposase IS1203 | Transposase |
| E4U78_RS27855 () | 55455..55700 | + | 246 | Protein_56 | IS3 family transposase IS1203 | Transposase |
| E4U78_RS27860 () | 55693..55917 | - | 225 | Protein_57 | IS3 family transposase IS3H | Transposase |
| E4U78_RS27865 () | 55991..65500 | - | 9510 | WP_000581719.1 | Toxin B | VF |
| E4U78_RS27870 () | 65607..65759 | - | 153 | Protein_59 | IS1 family transposase | - |
| E4U78_RS27875 () | 65720..65876 | - | 157 | Protein_60 | IS21 family transposase ISEc62 | Transposase |
| E4U78_RS27880 () | 65916..66179 | - | 264 | Protein_61 | IS21 family transposase ISEc62 | Transposase |
| E4U78_RS27885 () | 66273..66622 | + | 350 | Protein_62 | IS3 family transposase IS3H | Transposase |
| E4U78_RS27890 () | 67259..67690 | - | 432 | WP_001453090.1 | hypothetical protein | - |
| E4U78_RS27895 () | 67758..69779 | - | 2022 | Protein_64 | hypothetical protein | Relaxase |
| E4U78_RS27900 () | 69913..70071 | - | 159 | WP_001302184.1 | type I toxin-antitoxin system Hok family toxin | - |
| - () | 70136..70334 | - | 199 | NuclAT_0 | - | - |
| - () | 70136..70334 | - | 199 | NuclAT_0 | - | - |
| - () | 70136..70334 | - | 199 | NuclAT_0 | - | - |
| - () | 70136..70334 | - | 199 | NuclAT_0 | - | - |
| E4U78_RS27905 () | 70303..71064 | - | 762 | WP_001276250.1 | plasmid SOS inhibition protein A | - |
| E4U78_RS27910 () | 71061..71495 | - | 435 | WP_000845908.1 | conjugation system SOS inhibitor PsiB | - |
| E4U78_RS27915 () | 71550..73508 | - | 1959 | WP_000117168.1 | ParB/RepB/Spo0J family partition protein | - |
| E4U78_RS27920 () | 73574..73807 | - | 234 | WP_000005995.1 | DUF905 family protein | - |
| E4U78_RS27925 () | 73864..74316 | - | 453 | WP_000290823.1 | single-stranded DNA-binding protein | - |
| E4U78_RS27930 () | 74342..74548 | - | 207 | WP_000547965.1 | hypothetical protein | - |
| E4U78_RS27935 () | 74618..75073 | + | 456 | WP_001358896.1 | hypothetical protein | - |
| E4U78_RS27940 () | 75159..75722 | - | 564 | WP_001302171.1 | class I SAM-dependent methyltransferase | - |
| E4U78_RS27945 () | 75769..77130 | - | 1362 | WP_000199442.1 | DUF3560 domain-containing protein | - |
| E4U78_RS27950 () | 77182..77412 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| E4U78_RS27955 () | 77900..78289 | - | 390 | WP_001303399.1 | hypothetical protein | - |
| E4U78_RS27960 () | 78408..78599 | - | 192 | WP_001027495.1 | hypothetical protein | - |
| E4U78_RS27965 () | 78596..79018 | - | 423 | WP_000271685.1 | DUF1380 family protein | - |
| E4U78_RS27970 () | 79065..79367 | - | 303 | WP_010891293.1 | antirestriction protein | - |
| E4U78_RS27975 () | 79463..80035 | - | 573 | WP_001310284.1 | DUF1472 domain-containing protein | - |
| E4U78_RS27980 () | 80351..80684 | - | 334 | Protein_81 | hypothetical protein | - |
| E4U78_RS27985 () | 80730..81284 | - | 555 | WP_001358893.1 | DUF1380 family protein | - |
| E4U78_RS27990 () | 81178..81399 | - | 222 | WP_001104869.1 | hypothetical protein | - |
| E4U78_RS27995 () | 81400..82083 | - | 684 | WP_000085945.1 | DNA methylase | - |
| E4U78_RS28000 () | 82160..82465 | - | 306 | WP_010891292.1 | hypothetical protein | - |
| E4U78_RS28005 () | 82469..83371 | - | 903 | WP_000273919.1 | DUF1281 domain-containing protein | - |
| E4U78_RS28010 () | 83980..84951 | - | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| E4U78_RS28015 () | 84951..86117 | - | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| E4U78_RS28020 () | 86705..87460 | - | 756 | WP_000852148.1 | replication initiation protein RepE | - |
| E4U78_RS28025 () | 87536..88749 | + | 1214 | WP_162829202.1 | IS3 family transposase IS1203 | Transposase |
| E4U78_RS28030 () | 89472..90278 | - | 807 | WP_000016989.1 | site-specific integrase | - |
| E4U78_RS28035 () | 90279..90584 | - | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | - |
| E4U78_RS28040 () | 90586..90804 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | - |
| E4U78_RS28045 () | 91263..91946 | + | 684 | WP_010891291.1 | DNA-binding protein | - |
| E4U78_RS28050 () | 91943..92563 | + | 621 | WP_001248529.1 | hypothetical protein | - |
| E4U78_RS28055 () | 92560..92760 | + | 201 | WP_000708307.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|