MGE detailed information
MGE type: Genomic_island MGE length: 21219 bp
Accession: NZ_CP038305 Location: 4792849..4814067 Organism: Escherichia coli O157:H7 strain SS NE 1040-1 Replicon: chromosome
Accession: NZ_CP038305 Location: 4792849..4814067 Organism: Escherichia coli O157:H7 strain SS NE 1040-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E4U78_RS24095 () | 4788575..4789117 | + | 543 | WP_000934391.1 | hypothetical protein | - |
| E4U78_RS24100 () | 4789410..4791560 | + | 2151 | WP_001298933.1 | pyruvate/proton symporter BtsT | - |
| E4U78_RS24105 () | 4791610..4791813 | + | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| E4U78_RS24110 () | 4791824..4792780 | + | 957 | WP_001297640.1 | GTPase | - |
| E4U78_RS24115 () | 4792849..4794207 | - | 1359 | WP_001304004.1 | DUF262 domain-containing protein | - |
| E4U78_RS24120 () | 4794216..4794500 | - | 285 | WP_001304005.1 | DUF262 domain-containing protein | - |
| E4U78_RS24125 () | 4794778..4797210 | + | 2433 | WP_000819018.1 | DEAD/DEAH box helicase family protein | - |
| E4U78_RS24130 () | 4797277..4798746 | + | 1470 | WP_001302468.1 | type I restriction-modification system subunit M | - |
| E4U78_RS24135 () | 4798746..4800500 | + | 1755 | WP_000110082.1 | restriction endonuclease subunit S | - |
| - () | 4800650..4800726 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 4800650..4800726 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 4800650..4800726 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 4800650..4800726 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 4800650..4800726 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4800650..4800726 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4800650..4800726 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4800650..4800726 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| E4U78_RS24140 () | 4800721..4801062 | + | 342 | WP_000132630.1 | endoribonuclease SymE | Toxin Detail |
| E4U78_RS24145 () | 4801109..4802272 | - | 1164 | WP_001304006.1 | DUF1524 domain-containing protein | - |
| E4U78_RS24150 () | 4802320..4803201 | - | 882 | WP_001304007.1 | DUF262 domain-containing protein | - |
| E4U78_RS24155 () | 4803298..4803462 | - | 165 | WP_000394274.1 | DUF1127 domain-containing protein | - |
| E4U78_RS24160 () | 4803639..4805051 | + | 1413 | WP_000199295.1 | PLP-dependent aminotransferase family protein | - |
| E4U78_RS24165 () | 4805294..4805494 | - | 201 | WP_001310455.1 | hypothetical protein | - |
| E4U78_RS24170 () | 4805469..4806251 | - | 783 | WP_001303778.1 | Recombination-promoting nuclease RpnD | VF |
| E4U78_RS24175 () | 4806718..4807950 | + | 1233 | WP_001136983.1 | multidrug efflux MFS transporter MdtM | - |
| E4U78_RS24180 () | 4807991..4809262 | + | 1272 | WP_001037406.1 | DUF445 domain-containing protein | - |
| E4U78_RS24185 () | 4809378..4810529 | + | 1152 | WP_001302931.1 | 2-hydroxyacyl-CoA dehydratase subunit D | - |
| E4U78_RS24190 () | 4810539..4811306 | + | 768 | WP_000222489.1 | hypothetical protein | - |
| E4U78_RS24195 () | 4811303..4811569 | + | 267 | WP_000657677.1 | DUF3343 domain-containing protein | - |
| E4U78_RS24200 () | 4811881..4814067 | + | 2187 | WP_000535053.1 | hypothetical protein | VF |
| E4U78_RS24205 () | 4814333..4815175 | + | 843 | WP_000746206.1 | YjiK family protein | - |
| E4U78_RS24210 () | 4815243..4816421 | + | 1179 | WP_001089435.1 | MFS transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | NC_002655 | 5456776..5475497 | 0.003 | |||
| Escherichia coli O157:H7 str. Sakai | NC_002695 | 5426911..5445631 | 0.003 |