MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 96937 bp
Accession: NZ_CP038304 Location: 1..96937 Organism: Escherichia coli O157:H7 strain SS TX 313-1 Replicon: plasmid pTX313-1
Accession: NZ_CP038304 Location: 1..96937 Organism: Escherichia coli O157:H7 strain SS TX 313-1 Replicon: plasmid pTX313-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E4U66_RS28450 () | 2589..3464 | + | 876 | WP_001302175.1 | Type II secretion system protein C | VF |
| E4U66_RS28455 () | 3465..5432 | + | 1968 | WP_001302177.1 | Type II secretion system protein D | VF |
| E4U66_RS28460 () | 5432..6937 | + | 1506 | WP_000092338.1 | Type II secretion system protein E | VF |
| E4U66_RS28465 () | 6939..8162 | + | 1224 | WP_001173152.1 | Type II secretion system protein F | VF |
| E4U66_RS28470 () | 8193..8627 | + | 435 | WP_001231211.1 | Type II secretion system protein G | VF |
| E4U66_RS28475 () | 8624..9178 | + | 555 | WP_000082929.1 | Putative type II secretion system protein H | VF |
| E4U66_RS28480 () | 9193..9540 | + | 348 | WP_000173396.1 | Type II secretion system protein I | VF |
| E4U66_RS28485 () | 9537..10136 | + | 600 | WP_000082782.1 | Type II secretion system protein J | VF |
| E4U66_RS28490 () | 10133..11110 | + | 978 | WP_000776550.1 | Putative type II secretion system protein K | VF |
| E4U66_RS28495 () | 11149..12321 | + | 1173 | WP_071535692.1 | Type II secretion system protein L | VF |
| E4U66_RS28500 () | 12308..12820 | + | 513 | WP_001004187.1 | Type II secretion system protein M | VF |
| E4U66_RS28505 () | 12878..13711 | + | 834 | WP_000096786.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| E4U66_RS28510 () | 13803..14204 | + | 402 | WP_000971918.1 | GspS family T2SS pilot lipoprotein variant EptO | - |
| E4U66_RS28515 () | 14383..15554 | + | 1172 | Protein_14 | IS3 family transposase ISLad1 | Transposase |
| E4U66_RS28520 () | 16095..16610 | + | 516 | WP_000839950.1 | Hemolysin-activating lysine-acyltransferase HlyC | VF |
| E4U66_RS28525 () | 16612..19608 | + | 2997 | WP_000217739.1 | Hemolysin, chromosomal | VF |
| E4U66_RS28530 () | 19658..21778 | + | 2121 | WP_000987091.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| E4U66_RS28535 () | 21782..23221 | + | 1440 | WP_001213545.1 | Hemolysin secretion protein D, chromosomal | VF |
| E4U66_RS28540 () | 23342..23834 | + | 493 | Protein_19 | Transcriptional repressor MprA | VF |
| E4U66_RS28545 () | 23965..24195 | + | 231 | WP_010891288.1 | hypothetical protein | - |
| E4U66_RS28550 () | 24316..25056 | + | 741 | WP_001066920.1 | IS91 family transposase ISMno23 | Transposase |
| E4U66_RS28555 () | 25341..26317 | - | 977 | Protein_22 | replication initiation protein | - |
| E4U66_RS28560 () | 26725..26925 | - | 201 | WP_000708307.1 | hypothetical protein | - |
| E4U66_RS28565 () | 26922..27542 | - | 621 | WP_001248529.1 | hypothetical protein | - |
| E4U66_RS28570 () | 27539..28222 | - | 684 | WP_010891291.1 | DNA-binding protein | - |
| E4U66_RS28575 () | 28681..28899 | + | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| E4U66_RS28580 () | 28901..29206 | + | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| E4U66_RS28585 () | 29207..30013 | + | 807 | WP_000016989.1 | site-specific integrase | - |
| E4U66_RS28595 () | 32025..32780 | + | 756 | WP_000852148.1 | replication initiation protein RepE | - |
| E4U66_RS28600 () | 33368..34534 | + | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| E4U66_RS28605 () | 34534..35505 | + | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| E4U66_RS28610 () | 36114..37016 | + | 903 | WP_000273919.1 | DUF1281 domain-containing protein | - |
| E4U66_RS28615 () | 37020..37325 | + | 306 | WP_010891292.1 | hypothetical protein | - |
| E4U66_RS28620 () | 37402..38085 | + | 684 | WP_000085945.1 | DNA methylase | - |
| E4U66_RS28625 () | 38086..38307 | + | 222 | WP_001104869.1 | hypothetical protein | - |
| E4U66_RS28630 () | 38201..38755 | + | 555 | WP_001358893.1 | DUF1380 family protein | - |
| E4U66_RS28635 () | 38801..39134 | + | 334 | Protein_38 | hypothetical protein | - |
| E4U66_RS28640 () | 39450..40022 | + | 573 | WP_001310284.1 | DUF1472 domain-containing protein | - |
| E4U66_RS28645 () | 40118..40420 | + | 303 | WP_010891293.1 | antirestriction protein | - |
| E4U66_RS28650 () | 40467..40889 | + | 423 | WP_000271685.1 | DUF1380 family protein | - |
| E4U66_RS28655 () | 40886..41077 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| E4U66_RS28660 () | 41196..41585 | + | 390 | WP_001303399.1 | hypothetical protein | - |
| E4U66_RS28665 () | 42073..42303 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| E4U66_RS28670 () | 42355..43716 | + | 1362 | WP_000199442.1 | DUF3560 domain-containing protein | - |
| E4U66_RS28675 () | 43763..44326 | + | 564 | WP_001302171.1 | class I SAM-dependent methyltransferase | - |
| E4U66_RS28680 () | 44412..44867 | - | 456 | WP_001358896.1 | hypothetical protein | - |
| E4U66_RS28685 () | 44937..45143 | + | 207 | WP_000547965.1 | hypothetical protein | - |
| E4U66_RS28690 () | 45169..45621 | + | 453 | WP_000290823.1 | single-stranded DNA-binding protein | - |
| E4U66_RS28695 () | 45678..45911 | + | 234 | WP_000005995.1 | DUF905 family protein | - |
| E4U66_RS28700 () | 45977..47935 | + | 1959 | WP_000117168.1 | ParB/RepB/Spo0J family partition protein | - |
| E4U66_RS28705 () | 47990..48424 | + | 435 | WP_000845908.1 | conjugation system SOS inhibitor PsiB | - |
| E4U66_RS28710 () | 48421..49182 | + | 762 | WP_001276250.1 | plasmid SOS inhibition protein A | - |
| - () | 49151..49349 | + | 199 | NuclAT_0 | - | - |
| - () | 49151..49349 | + | 199 | NuclAT_0 | - | - |
| - () | 49151..49349 | + | 199 | NuclAT_0 | - | - |
| - () | 49151..49349 | + | 199 | NuclAT_0 | - | - |
| E4U66_RS28715 () | 49414..49572 | + | 159 | WP_001302184.1 | type I toxin-antitoxin system Hok family toxin | - |
| E4U66_RS28720 () | 49706..51727 | + | 2022 | Protein_55 | hypothetical protein | Relaxase |
| E4U66_RS28725 () | 51795..52226 | + | 432 | WP_001453090.1 | hypothetical protein | - |
| E4U66_RS28730 () | 52870..53219 | - | 350 | Protein_57 | IS3 family transposase IS3H | Transposase |
| E4U66_RS28735 () | 53313..53576 | + | 264 | Protein_58 | IS21 family transposase ISEc62 | Transposase |
| E4U66_RS28740 () | 53616..53772 | + | 157 | Protein_59 | IS21 family transposase ISEc62 | Transposase |
| E4U66_RS28745 () | 53733..53885 | + | 153 | Protein_60 | IS1 family transposase | - |
| E4U66_RS28750 () | 53992..63501 | + | 9510 | WP_000581719.1 | Toxin B | VF |
| E4U66_RS28755 () | 63575..63799 | + | 225 | Protein_62 | IS3 family transposase IS3H | Transposase |
| E4U66_RS28760 () | 63792..64037 | - | 246 | Protein_63 | IS3 family transposase IS1203 | Transposase |
| E4U66_RS28765 () | 64044..64295 | - | 252 | Protein_64 | IS3 family transposase IS1203 | Transposase |
| E4U66_RS28770 () | 64496..64876 | + | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| E4U66_RS28775 () | 64873..65220 | + | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| E4U66_RS28780 () | 65270..66808 | + | 1539 | WP_000998048.1 | IS66 family transposase ISEc8 | Transposase |
| E4U66_RS28785 () | 66847..68190 | + | 1344 | Protein_68 | Multifunctional conjugation protein TraI | Relaxase |
| E4U66_RS28790 () | 68210..68956 | + | 747 | WP_000205762.1 | conjugal transfer pilus acetylase TraX | - |
| E4U66_RS28795 () | 69015..69875 | + | 861 | WP_000704522.1 | putative protein YcjY | VF |
| E4U66_RS28800 () | 69978..70538 | + | 561 | WP_000840472.1 | fertility inhibition protein FinO | - |
| E4U66_RS28805 () | 70671..70883 | + | 213 | WP_001302189.1 | ANR family transcriptional regulator | - |
| E4U66_RS28810 () | 71128..71589 | + | 462 | WP_001233853.1 | thermonuclease family protein | - |
| E4U66_RS28815 () | 71635..71844 | + | 210 | WP_001302200.1 | hemolysin expression modulator Hha | - |
| E4U66_RS28820 () | 71882..72220 | + | 339 | WP_000766796.1 | hypothetical protein | - |
| E4U66_RS28825 () | 72460..72714 | + | 255 | WP_000083831.1 | replication regulatory protein RepA | - |
| E4U66_RS28830 () | 72950..73024 | + | 75 | WP_001370046.1 | RepA leader peptide Tap | - |
| E4U66_RS28835 () | 73017..73874 | + | 858 | WP_000130945.1 | incFII family plasmid replication initiator RepA | - |
| E4U66_RS28840 () | 74786..75070 | + | 285 | WP_001178089.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| E4U66_RS28845 () | 75070..75345 | + | 276 | WP_000421248.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| E4U66_RS28850 () | 75440..75646 | + | 207 | WP_001105064.1 | hypothetical protein | - |
| E4U66_RS28855 () | 75746..75961 | - | 216 | Protein_82 | transposase | - |
| E4U66_RS28860 () | 76005..76571 | - | 567 | Protein_83 | IS3 family transposase ISSd1 | Transposase |
| E4U66_RS28865 () | 76571..76987 | - | 417 | Protein_84 | transposase zinc-binding domain-containing protein | - |
| E4U66_RS28870 () | 76987..77172 | - | 186 | WP_001302179.1 | hypothetical protein | - |
| E4U66_RS28875 () | 77349..79559 | + | 2211 | WP_000592771.1 | Catalase-peroxidase | VF |
| E4U66_RS28880 () | 79603..79992 | + | 390 | WP_001172748.1 | cytochrome b562 family protein | - |
| E4U66_RS28885 () | 80049..81037 | + | 989 | Protein_88 | IS3 family transposase IS629 | Transposase |
| E4U66_RS28890 () | 81218..85120 | + | 3903 | WP_001034097.1 | Serine protease EspP | VF |
| E4U66_RS28895 () | 85376..85501 | - | 126 | Protein_90 | IS1 family transposase | - |
| E4U66_RS28900 () | 85540..85692 | - | 153 | Protein_91 | IS66 family transposase ISEc8 | Transposase |
| E4U66_RS28910 () | 86992..88392 | - | 1401 | Protein_93 | IS66 family transposase ISEc8 | Transposase |
| E4U66_RS28915 () | 88442..88789 | - | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| E4U66_RS28920 () | 88786..89166 | - | 381 | WP_171877073.1 | IS66 family transposase ISEc8 | Transposase |
| E4U66_RS28925 () | 89269..89621 | - | 353 | Protein_96 | IS1 family transposase IS1N | Transposase |
| E4U66_RS28930 () | 91062..91883 | + | 822 | WP_001302199.1 | polysaccharide deacetylase family protein | - |
| E4U66_RS28935 () | 91883..92989 | + | 1107 | WP_000975743.1 | glycosyltransferase family 4 protein | - |
| E4U66_RS28940 () | 93079..94800 | + | 1722 | WP_000550559.1 | phosphoethanolamine transferase CptA | - |
| E4U66_RS28945 () | 94874..95872 | + | 999 | WP_001302181.1 | Lipid A biosynthesis myristoyltransferase | VF |
| E4U66_RS28950 () | 95925..96113 | + | 189 | Protein_101 | hypothetical protein | - |
| E4U66_RS28955 () | 96217..96303 | - | 87 | Protein_102 | IS3 family transposase ISEhe3 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|