MGE detailed information
MGE type: Genomic_island MGE length: 21219 bp
Accession: NZ_CP038302 Location: 4941501..4962719 Organism: Escherichia coli O157:H7 strain SS TX 313-1 Replicon: chromosome
Accession: NZ_CP038302 Location: 4941501..4962719 Organism: Escherichia coli O157:H7 strain SS TX 313-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E4U66_RS25010 () | 4937227..4937769 | + | 543 | WP_000934391.1 | hypothetical protein | - |
| E4U66_RS25015 () | 4938062..4940212 | + | 2151 | WP_001298933.1 | pyruvate/proton symporter BtsT | - |
| E4U66_RS25020 () | 4940262..4940465 | + | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| E4U66_RS25025 () | 4940476..4941432 | + | 957 | WP_001297640.1 | GTPase | - |
| E4U66_RS25030 () | 4941501..4942859 | - | 1359 | WP_001304004.1 | DUF262 domain-containing protein | - |
| E4U66_RS25035 () | 4942868..4943152 | - | 285 | WP_001304005.1 | DUF262 domain-containing protein | - |
| E4U66_RS25040 () | 4943430..4945862 | + | 2433 | WP_000819018.1 | DEAD/DEAH box helicase family protein | - |
| E4U66_RS25045 () | 4945929..4947398 | + | 1470 | WP_001302468.1 | type I restriction-modification system subunit M | - |
| E4U66_RS25050 () | 4947398..4949152 | + | 1755 | WP_000110082.1 | restriction endonuclease subunit S | - |
| - () | 4949302..4949378 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4949302..4949378 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4949302..4949378 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4949302..4949378 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4949302..4949378 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 4949302..4949378 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 4949302..4949378 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 4949302..4949378 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| E4U66_RS25055 () | 4949373..4949714 | + | 342 | WP_000132630.1 | endoribonuclease SymE | Toxin Detail |
| E4U66_RS25060 () | 4949761..4950924 | - | 1164 | WP_001304006.1 | DUF1524 domain-containing protein | - |
| E4U66_RS25065 () | 4950972..4951853 | - | 882 | WP_001304007.1 | DUF262 domain-containing protein | - |
| E4U66_RS25070 () | 4951950..4952114 | - | 165 | WP_000394274.1 | DUF1127 domain-containing protein | - |
| E4U66_RS25075 () | 4952291..4953703 | + | 1413 | WP_000199295.1 | PLP-dependent aminotransferase family protein | - |
| E4U66_RS25080 () | 4953946..4954146 | - | 201 | WP_001310455.1 | hypothetical protein | - |
| E4U66_RS25085 () | 4954121..4954903 | - | 783 | WP_001303778.1 | Threonine efflux protein | VF |
| E4U66_RS25090 () | 4955370..4956602 | + | 1233 | WP_001136983.1 | multidrug efflux MFS transporter MdtM | - |
| E4U66_RS25095 () | 4956643..4957914 | + | 1272 | WP_001037406.1 | DUF445 domain-containing protein | - |
| E4U66_RS25100 () | 4958030..4959181 | + | 1152 | WP_001302931.1 | 2-hydroxyacyl-CoA dehydratase subunit D | - |
| E4U66_RS25105 () | 4959191..4959958 | + | 768 | WP_000222489.1 | hypothetical protein | - |
| E4U66_RS25110 () | 4959955..4960221 | + | 267 | WP_000657677.1 | DUF3343 domain-containing protein | - |
| E4U66_RS25115 () | 4960533..4962719 | + | 2187 | WP_000535053.1 | DNA helicase II | VF |
| E4U66_RS25120 () | 4962985..4963827 | + | 843 | WP_000746206.1 | YjiK family protein | - |
| E4U66_RS25125 () | 4963895..4965073 | + | 1179 | WP_001089435.1 | MFS transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | NC_002655 | 5456776..5475497 | 0.003 | |||
| Escherichia coli O157:H7 str. Sakai | NC_002695 | 5426911..5445631 | 0.003 |