MGE detailed information
MGE type: Genomic_island MGE length: 21219 bp
Accession: NZ_CP038300 Location: 4847179..4868397 Organism: Escherichia coli O157:H7 strain SS TX 754-1 Replicon: chromosome
Accession: NZ_CP038300 Location: 4847179..4868397 Organism: Escherichia coli O157:H7 strain SS TX 754-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E4U76_RS24410 () | 4842905..4843447 | + | 543 | WP_000934391.1 | hypothetical protein | - |
| E4U76_RS24415 () | 4843740..4845890 | + | 2151 | WP_001298933.1 | pyruvate/proton symporter BtsT | - |
| E4U76_RS24420 () | 4845940..4846143 | + | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| E4U76_RS24425 () | 4846154..4847110 | + | 957 | WP_001297640.1 | GTPase | - |
| E4U76_RS24430 () | 4847179..4848537 | - | 1359 | WP_001304004.1 | DUF262 domain-containing protein | - |
| E4U76_RS24435 () | 4848546..4848830 | - | 285 | WP_001304005.1 | DUF262 domain-containing protein | - |
| E4U76_RS24440 () | 4849108..4851540 | + | 2433 | WP_000819018.1 | DEAD/DEAH box helicase family protein | - |
| E4U76_RS24445 () | 4851607..4853076 | + | 1470 | WP_001302468.1 | type I restriction-modification system subunit M | - |
| E4U76_RS24450 () | 4853076..4854830 | + | 1755 | WP_000110082.1 | restriction endonuclease subunit S | - |
| - () | 4854980..4855056 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4854980..4855056 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4854980..4855056 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4854980..4855056 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4854980..4855056 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 4854980..4855056 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 4854980..4855056 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 4854980..4855056 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| E4U76_RS24455 () | 4855051..4855392 | + | 342 | WP_000132630.1 | endoribonuclease SymE | Toxin Detail |
| E4U76_RS24460 () | 4855439..4856602 | - | 1164 | WP_001304006.1 | DUF1524 domain-containing protein | - |
| E4U76_RS24465 () | 4856650..4857531 | - | 882 | WP_001304007.1 | DUF262 domain-containing protein | - |
| E4U76_RS24470 () | 4857628..4857792 | - | 165 | WP_000394274.1 | DUF1127 domain-containing protein | - |
| E4U76_RS24475 () | 4857969..4859381 | + | 1413 | WP_000199295.1 | PLP-dependent aminotransferase family protein | - |
| E4U76_RS24480 () | 4859624..4859824 | - | 201 | WP_001310455.1 | hypothetical protein | - |
| E4U76_RS24485 () | 4859799..4860581 | - | 783 | WP_001303778.1 | Recombination-promoting nuclease RpnD | VF |
| E4U76_RS24490 () | 4861048..4862280 | + | 1233 | WP_171888505.1 | multidrug efflux MFS transporter MdtM | - |
| E4U76_RS24495 () | 4862321..4863592 | + | 1272 | WP_001037406.1 | DUF445 domain-containing protein | - |
| E4U76_RS24500 () | 4863708..4864859 | + | 1152 | WP_001302931.1 | 2-hydroxyacyl-CoA dehydratase subunit D | - |
| E4U76_RS24505 () | 4864869..4865636 | + | 768 | WP_000222489.1 | hypothetical protein | - |
| E4U76_RS24510 () | 4865633..4865899 | + | 267 | WP_000657677.1 | DUF3343 domain-containing protein | - |
| E4U76_RS24515 () | 4866211..4868397 | + | 2187 | WP_000535053.1 | hypothetical protein | VF |
| E4U76_RS24520 () | 4868663..4869505 | + | 843 | WP_000746206.1 | YjiK family protein | - |
| E4U76_RS24525 () | 4869573..4870751 | + | 1179 | WP_001089435.1 | MFS transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | NC_002655 | 5456776..5475497 | 0.003 | |||
| Escherichia coli O157:H7 str. Sakai | NC_002695 | 5426911..5445631 | 0.003 |