MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 100480 bp
Accession: NZ_CP038286 Location: 1..100480 Organism: Escherichia coli O157:H7 strain YB14-1 Replicon: plasmid pYB14-1
Accession: NZ_CP038286 Location: 1..100480 Organism: Escherichia coli O157:H7 strain YB14-1 Replicon: plasmid pYB14-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E4U79_RS27625 () | 13..870 | + | 858 | WP_000130945.1 | incFII family plasmid replication initiator RepA | - |
| E4U79_RS27630 () | 1782..2066 | + | 285 | WP_001178089.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| E4U79_RS27635 () | 2066..2341 | + | 276 | WP_000421248.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| E4U79_RS27640 () | 2436..2642 | + | 207 | WP_001105064.1 | hypothetical protein | - |
| E4U79_RS27645 () | 2742..2957 | - | 216 | Protein_5 | IS91 family transposase ISEc37 | Transposase |
| E4U79_RS27650 () | 3001..3567 | - | 567 | Protein_6 | IS3 family transposase ISSfl10 | Transposase |
| E4U79_RS27655 () | 3567..3983 | - | 417 | Protein_7 | IS91 family transposase ISEc37 | Transposase |
| E4U79_RS27660 () | 3983..4168 | - | 186 | WP_001302179.1 | hypothetical protein | - |
| E4U79_RS27665 () | 4345..6555 | + | 2211 | WP_000592771.1 | Catalase-peroxidase | VF |
| E4U79_RS27670 () | 6599..6988 | + | 390 | WP_001172748.1 | cytochrome b562 family protein | - |
| E4U79_RS27675 () | 7045..8033 | + | 989 | Protein_11 | IS3 family transposase IS629 | Transposase |
| E4U79_RS27680 () | 8214..12116 | + | 3903 | WP_001034097.1 | Serine protease EspP | VF |
| E4U79_RS27685 () | 12372..12853 | - | 482 | Protein_13 | IS1 family transposase IS1N | Transposase |
| E4U79_RS27690 () | 14294..15115 | + | 822 | WP_001302199.1 | polysaccharide deacetylase family protein | - |
| E4U79_RS27695 () | 15115..16221 | + | 1107 | WP_000975743.1 | glycosyltransferase family 4 protein | - |
| E4U79_RS27700 () | 16311..18032 | + | 1722 | WP_000550559.1 | phosphoethanolamine transferase CptA | - |
| E4U79_RS27705 () | 18106..19104 | + | 999 | WP_001302181.1 | Lipid A biosynthesis myristoyltransferase | VF |
| E4U79_RS27710 () | 19157..19342 | + | 186 | Protein_18 | hypothetical protein | - |
| E4U79_RS27715 () | 19369..19800 | - | 432 | WP_001110622.1 | IS66 family transposase ISEc8 | Transposase |
| E4U79_RS27720 () | 19851..21388 | - | 1538 | Protein_20 | IS66 family transposase ISEc8 | Transposase |
| E4U79_RS27725 () | 21438..21785 | - | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| E4U79_RS27730 () | 21782..22162 | - | 381 | WP_054249760.1 | IS66 family transposase ISEc8 | Transposase |
| E4U79_RS27735 () | 22238..23209 | - | 972 | WP_171878422.1 | IS66 family transposase ISEc8 | Transposase |
| E4U79_RS27740 () | 23351..24889 | - | 1539 | WP_000998048.1 | IS66 family transposase ISEc8 | Transposase |
| E4U79_RS27745 () | 24939..25286 | - | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| E4U79_RS27750 () | 25283..25663 | - | 381 | WP_054249760.1 | IS66 family transposase ISEc8 | Transposase |
| E4U79_RS27755 () | 25856..26203 | - | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| E4U79_RS27760 () | 26200..26580 | - | 381 | WP_054249760.1 | IS66 family transposase ISEc8 | Transposase |
| E4U79_RS27765 () | 26744..26830 | - | 87 | Protein_29 | IS3 family transposase ISEhe3 | Transposase |
| E4U79_RS27770 () | 27288..29984 | + | 2697 | WP_072141201.1 | Metalloprotease StcE | VF |
| E4U79_RS27775 () | 30071..30946 | + | 876 | WP_001302175.1 | Type II secretion system protein C | VF |
| E4U79_RS27780 () | 30947..32914 | + | 1968 | WP_001302177.1 | Type II secretion system protein D | VF |
| E4U79_RS27785 () | 32914..34419 | + | 1506 | WP_000092338.1 | Type II secretion system protein E | VF |
| E4U79_RS27790 () | 34421..35644 | + | 1224 | WP_001173152.1 | Type II secretion system protein F | VF |
| E4U79_RS27795 () | 35675..36109 | + | 435 | WP_001231211.1 | Type II secretion system protein G | VF |
| E4U79_RS27800 () | 36106..36660 | + | 555 | WP_000082929.1 | Putative type II secretion system protein H | VF |
| E4U79_RS27805 () | 36675..37022 | + | 348 | WP_000173396.1 | Type II secretion system protein I | VF |
| E4U79_RS27810 () | 37019..37618 | + | 600 | WP_000082782.1 | Type II secretion system protein J | VF |
| E4U79_RS27815 () | 37615..38592 | + | 978 | WP_000776550.1 | Putative type II secretion system protein K | VF |
| E4U79_RS27820 () | 38631..39803 | + | 1173 | WP_071525076.1 | Type II secretion system protein L | VF |
| E4U79_RS27825 () | 39790..40302 | + | 513 | WP_001004187.1 | Type II secretion system protein M | VF |
| E4U79_RS27830 () | 40360..41193 | + | 834 | WP_000096786.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| E4U79_RS27835 () | 41285..41686 | + | 402 | WP_000971918.1 | GspS family T2SS pilot lipoprotein variant EptO | - |
| E4U79_RS27840 () | 41865..43036 | + | 1172 | Protein_44 | IS3 family transposase ISLad1 | Transposase |
| E4U79_RS27845 () | 43577..44092 | + | 516 | WP_000839950.1 | Hemolysin-activating lysine-acyltransferase HlyC | VF |
| E4U79_RS27850 () | 44094..47090 | + | 2997 | WP_000217739.1 | Hemolysin, chromosomal | VF |
| E4U79_RS27855 () | 47140..49260 | + | 2121 | WP_000987091.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| E4U79_RS27860 () | 49264..50703 | + | 1440 | WP_001213545.1 | Hemolysin secretion protein D, chromosomal | VF |
| E4U79_RS27865 () | 50824..51316 | + | 493 | Protein_49 | MarR family transcriptional regulator | - |
| E4U79_RS27870 () | 51447..51677 | + | 231 | WP_010891288.1 | hypothetical protein | - |
| E4U79_RS27875 () | 51798..52538 | + | 741 | WP_001066920.1 | IS91 family transposase ISMno23 | Transposase |
| E4U79_RS27880 () | 52823..53800 | - | 978 | WP_000361615.1 | RepB family plasmid replication initiator protein | - |
| E4U79_RS27885 () | 54208..54408 | - | 201 | WP_000708307.1 | hypothetical protein | - |
| E4U79_RS27890 () | 54405..55025 | - | 621 | WP_001248529.1 | hypothetical protein | - |
| E4U79_RS27895 () | 55022..55705 | - | 684 | WP_010891291.1 | DNA-binding protein | - |
| E4U79_RS27900 () | 56164..56382 | + | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| E4U79_RS27905 () | 56384..56689 | + | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| E4U79_RS27910 () | 56690..57496 | + | 807 | WP_000016989.1 | site-specific integrase | - |
| E4U79_RS27920 () | 59508..60263 | + | 756 | WP_000852148.1 | replication initiation protein RepE | - |
| E4U79_RS27925 () | 60851..62017 | + | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| E4U79_RS27930 () | 62017..62988 | + | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| E4U79_RS27935 () | 63597..64499 | + | 903 | WP_000273919.1 | DUF1281 domain-containing protein | - |
| E4U79_RS27940 () | 64503..64808 | + | 306 | WP_010891292.1 | hypothetical protein | - |
| E4U79_RS27945 () | 64885..65568 | + | 684 | WP_000085945.1 | DNA methylase | - |
| E4U79_RS27950 () | 65569..65790 | + | 222 | WP_001104869.1 | hypothetical protein | - |
| E4U79_RS27955 () | 65684..66238 | + | 555 | WP_001358893.1 | DUF1380 family protein | - |
| E4U79_RS27960 () | 66284..66617 | + | 334 | Protein_68 | hypothetical protein | - |
| E4U79_RS27965 () | 66933..67505 | + | 573 | WP_001310284.1 | DUF1472 domain-containing protein | - |
| E4U79_RS27970 () | 67601..67903 | + | 303 | WP_010891293.1 | antirestriction protein | - |
| E4U79_RS27975 () | 67950..68372 | + | 423 | WP_000271685.1 | DUF1380 family protein | - |
| E4U79_RS27980 () | 68369..68560 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| E4U79_RS27985 () | 68679..69068 | + | 390 | WP_001303399.1 | hypothetical protein | - |
| E4U79_RS27990 () | 69556..69786 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| E4U79_RS27995 () | 69838..71199 | + | 1362 | WP_000199442.1 | DUF3560 domain-containing protein | - |
| E4U79_RS28000 () | 71246..71809 | + | 564 | WP_001302171.1 | class I SAM-dependent methyltransferase | - |
| E4U79_RS28005 () | 71895..72350 | - | 456 | WP_001358896.1 | hypothetical protein | - |
| E4U79_RS28010 () | 72420..72626 | + | 207 | WP_000547965.1 | hypothetical protein | - |
| E4U79_RS28015 () | 72652..73104 | + | 453 | WP_000290823.1 | single-stranded DNA-binding protein | - |
| E4U79_RS28020 () | 73161..73394 | + | 234 | WP_000005995.1 | DUF905 family protein | - |
| E4U79_RS28025 () | 73460..75418 | + | 1959 | WP_000117168.1 | ParB/RepB/Spo0J family partition protein | - |
| E4U79_RS28030 () | 75473..75907 | + | 435 | WP_000845908.1 | conjugation system SOS inhibitor PsiB | - |
| E4U79_RS28035 () | 75904..76665 | + | 762 | WP_001276250.1 | plasmid SOS inhibition protein A | - |
| - () | 76634..76832 | + | 199 | NuclAT_0 | - | - |
| - () | 76634..76832 | + | 199 | NuclAT_0 | - | - |
| - () | 76634..76832 | + | 199 | NuclAT_0 | - | - |
| - () | 76634..76832 | + | 199 | NuclAT_0 | - | - |
| E4U79_RS28040 () | 76897..77055 | + | 159 | WP_001302184.1 | type I toxin-antitoxin system Hok family toxin | - |
| E4U79_RS28045 () | 77189..79210 | + | 2022 | Protein_85 | hypothetical protein | Relaxase |
| E4U79_RS28050 () | 79278..79709 | + | 432 | WP_001453090.1 | hypothetical protein | - |
| E4U79_RS28055 () | 80346..80695 | - | 350 | Protein_87 | IS3 family transposase IS3H | Transposase |
| E4U79_RS28060 () | 80789..81052 | + | 264 | Protein_88 | IS21 family transposase ISEc62 | Transposase |
| E4U79_RS28065 () | 81092..81248 | + | 157 | Protein_89 | IS21 family transposase ISEc62 | Transposase |
| E4U79_RS28070 () | 81209..81361 | + | 153 | Protein_90 | IS1 family transposase | - |
| E4U79_RS28075 () | 81468..90977 | + | 9510 | WP_000581719.1 | Toxin B | VF |
| E4U79_RS28080 () | 91051..91275 | + | 225 | Protein_92 | IS3 family transposase IS3H | Transposase |
| E4U79_RS28085 () | 91268..91513 | - | 246 | Protein_93 | IS3 family transposase IS1203 | Transposase |
| E4U79_RS28090 () | 91520..91771 | - | 252 | Protein_94 | IS3 family transposase IS1203 | Transposase |
| E4U79_RS28095 () | 91972..92352 | + | 381 | WP_054249760.1 | IS66 family transposase ISEc8 | Transposase |
| E4U79_RS28100 () | 92349..92696 | + | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| E4U79_RS28105 () | 92746..94284 | + | 1539 | WP_000998048.1 | IS66 family transposase ISEc8 | Transposase |
| E4U79_RS28110 () | 94323..95666 | + | 1344 | Protein_98 | Multifunctional conjugation protein TraI | Relaxase |
| E4U79_RS28115 () | 95686..96432 | + | 747 | WP_000205762.1 | conjugal transfer pilus acetylase TraX | - |
| E4U79_RS28120 () | 96491..97351 | + | 861 | WP_000704522.1 | putative protein YcjY | VF |
| E4U79_RS28125 () | 97454..98014 | + | 561 | WP_000840472.1 | fertility inhibition protein FinO | - |
| E4U79_RS28130 () | 98147..98359 | + | 213 | WP_001302189.1 | ANR family transcriptional regulator | - |
| E4U79_RS28135 () | 98604..99065 | + | 462 | WP_001233853.1 | thermonuclease family protein | - |
| E4U79_RS28140 () | 99111..99320 | + | 210 | WP_001302200.1 | hemolysin expression modulator Hha | - |
| E4U79_RS28145 () | 99358..99696 | + | 339 | WP_000766796.1 | hypothetical protein | - |
| E4U79_RS28150 () | 99936..100190 | + | 255 | WP_000083831.1 | replication regulatory protein RepA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|